FFCP PHASE1:Hg19::chr5:149682252..149682265,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340075 | |EntrezGene=340075 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32521 | |HGNC=32521 | ||
|TSSclassifier=strong | |||
|UniProt=Q5FYB1 | |UniProt=Q5FYB1 | ||
|association_with_transcript=250bp_to_ENST00000328668_5end | |association_with_transcript=250bp_to_ENST00000328668_5end | ||
|cluster_id=chr5:149682252..149682265,- | |||
|coexpression_cluster_id=C231 | |coexpression_cluster_id=C231 | ||
|description=CAGE_peak_6_at_ARSI_5end | |description=CAGE_peak_6_at_ARSI_5end | ||
|id=chr5:149682252..149682265,- | |id=chr5:149682252..149682265,- | ||
|ontology_enrichment_celltype=CL:0000077!2.75e-15!19;CL:0002586!2.21e-07!3;CL:0000064!4.75e-07!3;CL:0005012!4.75e-07!3;CL:0000067!4.75e-07!3;CL:0002304!4.75e-07!3 | |ontology_enrichment_celltype=CL:0000077!2.75e-15!19;CL:0002586!2.21e-07!3;CL:0000064!4.75e-07!3;CL:0005012!4.75e-07!3;CL:0000067!4.75e-07!3;CL:0002304!4.75e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002586;2.35e-26;3!CL:0000149;6.16e-20;4!CL:0000077;1.31e-11;19!CL:0002599;7.54e-10;1!CL:0000306;1.31e-09;4!CL:0002222;1.31e-09;4!CL:0002224;1.31e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.12e-26,3;CL:0000149,3.54e-20,4;CL:0000077,1.26e-11,19;CL:0002599,5.79e-10,1;CL:0000306,1.17e-09,4;CL:0002222,1.17e-09,4;CL:0002224,1.17e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;3.55e-10;1!DOID:3149;3.55e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.44e-10,1;DOID:3149,4.44e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007625!1.67e-17!11;UBERON:0000019!1.03e-10!19;UBERON:0000047!1.03e-10!19;UBERON:0004088!1.03e-10!19;UBERON:0003072!1.03e-10!19;UBERON:0003071!1.03e-10!19;UBERON:0004128!1.03e-10!19;UBERON:0000970!4.87e-10!20;UBERON:0000020!6.04e-10!23;UBERON:0002104!1.98e-09!21;UBERON:0001456!1.98e-09!21;UBERON:0001032!2.10e-09!24;UBERON:0004456!2.10e-09!24;UBERON:0000488!8.66e-09!4;UBERON:0001444!1.93e-07!48;UBERON:0001781!2.21e-07!3;UBERON:0001782!2.21e-07!3;UBERON:0005424!2.21e-07!3;UBERON:0001778!4.75e-07!3;UBERON:0001775!4.75e-07!3;UBERON:0000966!9.42e-07!5;UBERON:0005388!9.42e-07!5;UBERON:0001802!9.42e-07!5 | |ontology_enrichment_uberon=UBERON:0007625!1.67e-17!11;UBERON:0000019!1.03e-10!19;UBERON:0000047!1.03e-10!19;UBERON:0004088!1.03e-10!19;UBERON:0003072!1.03e-10!19;UBERON:0003071!1.03e-10!19;UBERON:0004128!1.03e-10!19;UBERON:0000970!4.87e-10!20;UBERON:0000020!6.04e-10!23;UBERON:0002104!1.98e-09!21;UBERON:0001456!1.98e-09!21;UBERON:0001032!2.10e-09!24;UBERON:0004456!2.10e-09!24;UBERON:0000488!8.66e-09!4;UBERON:0001444!1.93e-07!48;UBERON:0001781!2.21e-07!3;UBERON:0001782!2.21e-07!3;UBERON:0005424!2.21e-07!3;UBERON:0001778!4.75e-07!3;UBERON:0001775!4.75e-07!3;UBERON:0000966!9.42e-07!5;UBERON:0005388!9.42e-07!5;UBERON:0001802!9.42e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.22e-27;11!UBERON:0001781;2.35e-26;3!UBERON:0001782;2.35e-26;3!UBERON:0000966;4.47e-16;5!UBERON:0005388;4.47e-16;5!UBERON:0001802;4.47e-16;5!UBERON:0000019;7.47e-16;19!UBERON:0000047;7.47e-16;19!UBERON:0004088;7.47e-16;19!UBERON:0010230;7.47e-16;19!UBERON:0000970;4.85e-15;20!UBERON:0002104;2.64e-14;21!UBERON:0001456;2.64e-14;21!UBERON:0000020;5.03e-13;23!UBERON:0001032;1.83e-12;24!UBERON:0004456;1.83e-12;24!UBERON:0010077;1.31e-09;4!UBERON:0005389;1.31e-09;4!UBERON:0000484;1.31e-09;4!UBERON:0000965;1.31e-09;4!UBERON:0001803;1.31e-09;4!UBERON:0010371;4.92e-09;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,8.77e-28,11;UBERON:0001782,1.12e-26,3;UBERON:0005424,1.12e-26,3;UBERON:0001781,3.54e-20,4;UBERON:0000019,4.07e-15,20;UBERON:0000047,4.07e-15,20;UBERON:0010312,4.07e-15,20;UBERON:0004088,4.07e-15,20;UBERON:0010230,4.07e-15,20;UBERON:0003072,4.07e-15,20;UBERON:0004128,4.07e-15,20;UBERON:0003071,4.07e-15,20;UBERON:0000970,2.23e-14,21;UBERON:0002104,2.23e-14,21;UBERON:0001456,1.05e-13,22;UBERON:0000966,1.18e-13,6;UBERON:0005388,1.18e-13,6;UBERON:0001802,1.18e-13,6;UBERON:0000020,1.58e-12,24;UBERON:0001032,1.58e-12,24;UBERON:0004456,1.58e-12,24;UBERON:0010077,1.17e-09,4;UBERON:0005389,1.17e-09,4;UBERON:0000484,1.17e-09,4;UBERON:0002546,1.17e-09,4;UBERON:0000965,1.17e-09,4;UBERON:0001803,1.17e-09,4;UBERON:0003073,1.17e-09,4;UBERON:0005426,1.17e-09,4;UBERON:0005085,1.34e-09,31;UBERON:0001444,7.27e-08,49;UBERON:0000033,8.68e-07,56 | |||
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| ||
|short_description=p6@ARSI | |short_description=p6@ARSI | ||
}} | }} |
Latest revision as of 03:54, 16 September 2015
Short description: | p6@ARSI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ARSI_5end |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | 250bp_to_ENST00000328668_5end |
EntrezGene: | ARSI |
HGNC: | 32521 |
UniProt: | Q5FYB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.12e-26 | 3 |
visual pigment cell | 3.54e-20 | 4 |
mesothelial cell | 1.26e-11 | 19 |
smooth muscle cell of the esophagus | 5.79e-10 | 1 |
crystallin accumulating cell | 1.17e-09 | 4 |
vertebrate lens cell | 1.17e-09 | 4 |
lens epithelial cell | 1.17e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 8.77e-28 | 11 |
pigmented layer of retina | 1.12e-26 | 3 |
presumptive retinal pigmented epithelium | 1.12e-26 | 3 |
layer of retina | 3.54e-20 | 4 |
camera-type eye | 4.07e-15 | 20 |
simple eye | 4.07e-15 | 20 |
immature eye | 4.07e-15 | 20 |
ocular region | 4.07e-15 | 20 |
eyeball of camera-type eye | 4.07e-15 | 20 |
optic cup | 4.07e-15 | 20 |
optic vesicle | 4.07e-15 | 20 |
eye primordium | 4.07e-15 | 20 |
eye | 2.23e-14 | 21 |
visual system | 2.23e-14 | 21 |
face | 1.05e-13 | 22 |
retina | 1.18e-13 | 6 |
photoreceptor array | 1.18e-13 | 6 |
posterior segment of eyeball | 1.18e-13 | 6 |
sense organ | 1.58e-12 | 24 |
sensory system | 1.58e-12 | 24 |
entire sense organ system | 1.58e-12 | 24 |
cuboidal epithelium | 1.17e-09 | 4 |
transparent eye structure | 1.17e-09 | 4 |
simple cuboidal epithelium | 1.17e-09 | 4 |
cranial placode | 1.17e-09 | 4 |
lens of camera-type eye | 1.17e-09 | 4 |
epithelium of lens | 1.17e-09 | 4 |
lens placode | 1.17e-09 | 4 |
lens vesicle | 1.17e-09 | 4 |
ectodermal placode | 1.34e-09 | 31 |
subdivision of head | 7.27e-08 | 49 |
head | 8.68e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.44e-10 | 1 |
keratoacanthoma | 4.44e-10 | 1 |