FFCP PHASE1:Hg19::chr16:29690453..29690507,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23475 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9755 | |||
|TSSclassifier=strong | |||
|UniProt=Q15274 | |||
|association_with_transcript=12bp_to_NM_014298,uc002dto.2,uc010vdu.1_5end | |||
|cluster_id=chr16:29690453..29690507,+ | |||
|description=CAGE_peak_1_at_QPRT_5end | |||
|id=chr16:29690453..29690507,+ | |||
|ontology_enrichment_celltype=CL:1000497!1.20e-08!18;CL:0002518!1.20e-08!18;CL:0000147!1.25e-08!14;CL:1000449!6.36e-08!16;CL:0000148!1.72e-07!10;CL:0000541!1.72e-07!10;CL:1000507!3.49e-07!12;CL:1000494!3.49e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000147;1.04e-08;14!CL:1000497;1.81e-08;17!CL:0002518;1.81e-08;17!CL:1000507;8.81e-08;10!CL:1000494;8.81e-08;10!CL:1000449;9.71e-08;15!CL:0000148;1.46e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,1.04e-08,14;CL:1000497,1.73e-08,17;CL:0002518,1.73e-08,17;CL:1000507,8.78e-08,10;CL:1000494,8.78e-08,10;CL:1000449,9.27e-08,15;CL:0000148,1.47e-07,10;CL:0000541,1.47e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002417!9.48e-13!61;UBERON:0000916!9.48e-13!61;UBERON:0005172!9.95e-13!55;UBERON:0005173!9.95e-13!55;UBERON:0000080!1.74e-08!18;UBERON:0002120!1.74e-08!18;UBERON:0004875!1.74e-08!18;UBERON:0005721!1.74e-08!18;UBERON:0005754!1.74e-08!18;UBERON:0007297!1.74e-08!18;UBERON:0002113!2.06e-08!27;UBERON:0003918!2.06e-08!27;UBERON:0005095!2.06e-08!27;UBERON:0007687!2.06e-08!27;UBERON:0006555!2.42e-08!17;UBERON:0005103!2.42e-08!17;UBERON:0000083!2.42e-08!17;UBERON:0009201!2.42e-08!17;UBERON:0004819!2.42e-08!17;UBERON:0006553!2.42e-08!17;UBERON:0003074!2.42e-08!17;UBERON:0003060!2.42e-08!17;UBERON:0003887!4.88e-08!21;UBERON:0004211!6.36e-08!16;UBERON:0001285!6.36e-08!16;UBERON:0007684!6.36e-08!16;UBERON:0003220!6.36e-08!16;UBERON:0004208!6.36e-08!16;UBERON:0003886!6.75e-08!63;UBERON:0000466!1.07e-07!126;UBERON:0005256!1.73e-07!143;UBERON:0009773!3.49e-07!12;UBERON:0001231!3.49e-07!12;UBERON:0004810!3.49e-07!12;UBERON:0000489!3.68e-07!32;UBERON:0004876!3.74e-07!20;UBERON:0005177!5.11e-07!107;UBERON:0006554!5.87e-07!44;UBERON:0000481!6.14e-07!347;UBERON:0009569!9.04e-07!113;UBERON:0002553!9.37e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0005172;3.53e-08;52!UBERON:0005173;3.53e-08;52!UBERON:0004211;8.81e-08;10!UBERON:0009773;8.81e-08;10!UBERON:0001231;8.81e-08;10!UBERON:0004810;8.81e-08;10!UBERON:0006555;9.71e-08;15!UBERON:0004819;9.71e-08;15!UBERON:0001285;9.71e-08;15!UBERON:0007684;9.71e-08;15!UBERON:0002113;1.31e-07;24!UBERON:0011143;1.31e-07;24!UBERON:0002417;9.13e-07;58!UBERON:0000916;9.13e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002417,1.50e-12,60;UBERON:0000916,1.50e-12,60;UBERON:0005172,1.59e-12,54;UBERON:0005173,1.59e-12,54;UBERON:0003104,9.62e-10,160;UBERON:0009142,9.62e-10,160;UBERON:0002113,3.12e-08,26;UBERON:0003918,3.12e-08,26;UBERON:0011143,3.12e-08,26;UBERON:0005095,3.12e-08,26;UBERON:0007687,3.12e-08,26;UBERON:0006555,3.50e-08,16;UBERON:0004819,3.50e-08,16;UBERON:0006554,6.29e-08,47;UBERON:0004810,8.78e-08,10;UBERON:0004211,9.27e-08,15;UBERON:0009773,9.27e-08,15;UBERON:0001231,9.27e-08,15;UBERON:0001285,9.27e-08,15;UBERON:0007684,9.27e-08,15;UBERON:0004208,9.27e-08,15;UBERON:0001008,1.39e-07,48;UBERON:0000489,4.92e-07,31 | |||
|phase1_expression=7.26713517082227,52.4546283532909,14.518303621885,27.0197905553452,72.4076972972206,37.5105565363159,65.8579683237607,83.3870232923417,12.5369101535922,18.1843113011117,88.6207483324983,159.025318910765,161.425390675814,30.1989901222514,31.8141480698799,6.05092631806598,1.20538905604795,0.730310090387373,0.487932798790507,17.8525534211342,7.54802557603736,21.0014663390319,8.01460763966959,3.96935832711364,7.40701573609337,24.0702228106046,17.6516267317383,22.3538618930849,0,0,0.619264493264304,5.51652734687356,3.31326510656075,0.369754010166788,1.39440961044543,19.3350156182893,10.8632162553893,0.553995408531877,0,0,29.1090116511902,22.3486629553096,35.0302771982494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0.587237189370939,0,10.5737062863221,7.28661131875997,11.8522838148785,0,0,0,0,0,0,0,0.891283655081389,0,0,0,1.40900451698243,0.650296737799391,1.64437904603676,1.38175008892924,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0.950452044448374,0.451725357233318,0,0,0,0,0.201606743224732,0,0,97.5227465255847,85.1790091823618,15.7270951067542,0,0,0.289693037921647,0.795285947051099,2.43317435151318,39.5155535745804,60.9755843022051,32.059696777991,49.24813238714,49.9084544960783,17.0560843680838,294.039938651143,282.960823111309,198.373277094147,2.14641561874808,2.85997455390064,2.60020250930695,0,2.58070378531837,0,0,0,0,0,0,1.77883131343355,0,0,0,0.976248230192678,0,0,1.42879565254528,1.79623498100936,2.13961812918312,0,0,0.183201743930407,0,0,5.23312862571041,0.993943903390637,1.64619665163954,26.8790637050834,6.3104056564739,5.67469411517371,19.0630384048384,3.20246987189115,5.42668606517752,34.5444249293741,11.8545391421326,11.2788713148287,43.1368668788054,16.70910180992,19.2143574103713,88.653461819811,18.8255701109668,86.2318886783892,40.9846400266739,77.3752674079669,91.2930243564615,11.6367877615289,14.9857867120357,14.6722609269587,11.8800285728205,5.93440630268536,135.614042928766,298.945146995555,17.6752919651769,12.0113779077086,8.86605169549385,8.77955241761676,5.21029252858333,6.30999847407706,3.85669422744072,2.51145489964407,9.1829677191984,1.48352330811693,0.900273288253207,2.57631323096097,6.1833729610951,7.44467425326359,2.02531598689519,2.33848812386877,4.03894038790583,5.98324341174946,24.085262466003,23.0756235135799,14.6090542430078,8.47802961552438,38.0723880731695,2.18196896472668,4.87567812161307,184.790164786337,146.975513068527,193.346720934879,150.723173992349,182.175654332204,116.062800186114,37.5478877591558,98.4158635435114,15.1948413487729,36.2206983864944,153.760329595622,12.6588276042633,13.9925292764824,15.4247059125428,12.9043948096901,16.9945966392077,14.4735077657769,14.6966125894579,15.5014957449023,12.3119090222845,3.69077727312324,51.889456307275,202.494413575049,280.786638746385,386.602856206584,284.037065619834,219.773845285482,68.4267804092708,150.168883461142,41.3478422819447,25.5718165002098,23.6043681841001,9.75131032392819,15.2770934511574,7.49359102213747,39.517521840624,50.5159697088456,58.4289241074387,42.3845386191316,0.866198686566443,0.462985512576611,0,67.9575782244977,54.084628211977,26.0990026452641,0.936017060556951,15.1603785534503,20.6214434770909,1.17587489739202,10.4913571959366,0.179117045405697,0,1.91691339582606,9.36060152002293,33.2823080569994,7.67114027500857,21.9062329193781,7.95327330586194,114.359707620196,240.270719676157,684.549891706674,248.055046732923,188.894104096005,221.953519746655,490.763984826703,13.0072057840618,46.2117672963277,3.59357600522655,34.5155481073267,454.223686231891,42.2651376278,143.07470672266,192.413758286027,34.7229955253892,7.09245660116391,19.7152412471914,77.6370505563741,428.67106825924,94.6726387297884,25.0816861906176,88.1372032881514,15.0470855857352,205.280215777578,143.803020669049,134.863565104595,195.814286832317,249.621774441767,113.850327320837,2.15662369942424,5.7430967917057,0,3.61953266668948,1.2328579353023,0.716243852959582,0,0.394061520403854,0,0,14.9915828291253,3.90419561572865,3.86644406388848,7.203199409377,3.82763250991898,0.749007023947182,0,0,16.0725854152073,56.0190983586838,46.3863190526548,5.61521326133179,1.96271887676878,5.36188211115378,2.34282829985426,13.5425744877474,113.703752027992,20.694614258501,5.97803038681893,6.63729006750131,58.2120216936155,190.514526211247,113.923616705204,0,0,0.106727557803444,29.1002468588409,324.549107045469,160.87163605139,17.1194387394956,10.4354141835882,14.8749850049529,23.3213251645376,9.72243773226737,15.2811225086427,60.8514072424463,32.5382453923603,31.7835488310497,29.0730132288884,21.8086860257121,41.6033154886654,139.834383177507,40.9033199418701,2.4861867012692,12.0555170572837,15.1135669445575,95.3274496755013,340.655707745096,237.746345641328,346.68259797617,211.901875747228,80.8525477319428,18.1973414513435,6.80374821106063,62.1837838374161,83.2827164527562,302.918117174027,679.287953799472,278.57976643822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| |||
|short_description=p1@QPRT | |||
}} |
Latest revision as of 03:02, 16 September 2015
Short description: | p1@QPRT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_QPRT_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_NM_014298, uc002dto.2, uc010vdu.1_5end |
EntrezGene: | QPRT |
HGNC: | 9755 |
UniProt: | Q15274 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 1.04e-08 | 14 |
kidney cell | 1.73e-08 | 17 |
kidney epithelial cell | 1.73e-08 | 17 |
kidney tubule cell | 8.78e-08 | 10 |
nephron tubule epithelial cell | 8.78e-08 | 10 |
epithelial cell of nephron | 9.27e-08 | 15 |
melanocyte | 1.47e-07 | 10 |
melanoblast | 1.47e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
abdominal segment of trunk | 1.50e-12 | 60 |
abdomen | 1.50e-12 | 60 |
abdomen element | 1.59e-12 | 54 |
abdominal segment element | 1.59e-12 | 54 |
mesenchyme | 9.62e-10 | 160 |
entire embryonic mesenchyme | 9.62e-10 | 160 |
kidney | 3.12e-08 | 26 |
kidney mesenchyme | 3.12e-08 | 26 |
upper urinary tract | 3.12e-08 | 26 |
kidney rudiment | 3.12e-08 | 26 |
kidney field | 3.12e-08 | 26 |
excretory tube | 3.50e-08 | 16 |
kidney epithelium | 3.50e-08 | 16 |
urinary system structure | 6.29e-08 | 47 |
nephron tubule epithelium | 8.78e-08 | 10 |
nephron epithelium | 9.27e-08 | 15 |
renal tubule | 9.27e-08 | 15 |
nephron tubule | 9.27e-08 | 15 |
nephron | 9.27e-08 | 15 |
uriniferous tubule | 9.27e-08 | 15 |
nephrogenic mesenchyme | 9.27e-08 | 15 |
renal system | 1.39e-07 | 48 |
cavitated compound organ | 4.92e-07 | 31 |