FFCP PHASE1:Hg19::chr19:14049136..14049171,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79883 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26275 | |||
|TSSclassifier=strong | |||
|UniProt=A8K3W6,B7Z3M0,Q6PEZ8 | |||
|association_with_transcript=117bp_to_ENST00000339560,NM_024825,uc002mxr.2_5end | |||
|cluster_id=chr19:14049136..14049171,- | |||
|coexpression_cluster_id=C1421 | |||
|description=CAGE_peak_2_at_PODNL1_5end | |||
|id=chr19:14049136..14049171,- | |||
|ontology_enrichment_celltype=CL:0000055!2.85e-31!180;CL:0000057!3.43e-19!75;CL:0000183!7.21e-10!59;CL:0000680!9.66e-10!57;CL:0000056!9.66e-10!57;CL:0000355!9.66e-10!57;CL:0000187!7.33e-09!54;CL:0002620!3.73e-08!23;CL:0002334!7.49e-08!12;CL:0000192!2.72e-07!42;CL:0000514!2.72e-07!42;CL:0000393!7.41e-07!60;CL:0000211!7.41e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.08e-11;23!CL:0000499;7.21e-08;28!CL:0002559;2.05e-07;5!CL:0000153;3.51e-07;9!CL:0000447;3.51e-07;9!CL:0002334;5.66e-07;12!CL:0002320;6.09e-07;188!CL:0000057;8.16e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.75e-19,76;CL:0002620,1.56e-11,23;CL:0000048,1.41e-10,427;CL:0000723,4.85e-10,433;CL:0000034,2.35e-09,441;CL:0002320,5.09e-09,361;CL:0000499,6.77e-08,28;CL:0000219,1.59e-07,386;CL:0002559,1.83e-07,5;CL:0000153,3.15e-07,9;CL:0000447,3.15e-07,9;CL:0000134,3.71e-07,354;CL:0002334,6.03e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;9.77e-07;5!DOID:450;9.77e-07;5!DOID:66;9.77e-07;5!DOID:423;9.77e-07;5!DOID:0080000;9.77e-07;5!DOID:11722;9.77e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.32e-07,5;DOID:450,8.32e-07,5;DOID:66,8.32e-07,5;DOID:423,8.32e-07,5;DOID:0080000,8.32e-07,5;DOID:11722,8.32e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.04e-14!365;UBERON:0000914!3.19e-12!83;UBERON:0002329!3.19e-12!83;UBERON:0003077!3.19e-12!83;UBERON:0003059!3.19e-12!83;UBERON:0007282!3.19e-12!83;UBERON:0009618!3.19e-12!83;UBERON:0007285!3.19e-12!83;UBERON:0004290!3.02e-09!70;UBERON:0001134!7.58e-09!61;UBERON:0002036!7.58e-09!61;UBERON:0003082!7.58e-09!61;UBERON:0005256!1.27e-08!143;UBERON:0002385!3.59e-08!63;UBERON:0001015!3.59e-08!63;UBERON:0000383!3.59e-08!63;UBERON:0003102!3.63e-08!95;UBERON:0000486!1.48e-07!82;UBERON:0002100!2.82e-07!216;UBERON:0002199!3.31e-07!45;UBERON:0002416!3.31e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.61e-09;9!UBERON:0000042;1.61e-09;9!UBERON:0003688;3.46e-09;6!UBERON:0002358;3.46e-09;6!UBERON:0003684;3.46e-09;6!UBERON:0001178;3.46e-09;6!UBERON:0002384;2.92e-08;198!UBERON:0002073;2.05e-07;5!UBERON:0002097;4.76e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.05e-10,371;UBERON:0002199,1.07e-09,46;UBERON:0002416,1.07e-09,46;UBERON:0002097,2.43e-09,41;UBERON:0003688,3.76e-09,6;UBERON:0002358,3.76e-09,6;UBERON:0003684,3.76e-09,6;UBERON:0001178,3.76e-09,6;UBERON:0003102,1.50e-07,99;UBERON:0002073,1.83e-07,5;UBERON:0005086,1.83e-07,5 | |||
|phase1_expression=6.7221000330106,4.06790995392868,4.08767771878316,10.007329835313,6.25745532198203,5.23403114460221,12.6649939084155,0,0.261185628199839,0.491467873003018,0.697801167972428,0,0,2.35156070624089,3.31397375727916,0,0.602694528023977,0.730310090387373,1.46379839637152,1.23121058076788,0.612002073732759,3.76145665773705,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3372698286148,5.51471701699479,7.38717246700201,15.905718941022,10.2193322763554,0.756278537312543,0.443458794925128,0.702678285545008,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95760732373446,0.759783069987479,0.264818361626438,5.73673241497627,1.06400514659507,0.560677600142307,0,1.72667283892012,0,0,0,0.605429710579726,0,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0,0,1.22492502752936,0.491337269247072,0.929932030581889,13.0680314301026,7.91254173691382,3.64064544775211,17.965453545406,0.336672227908132,0.250237039743928,0,3.5118209670467,4.29082914118628,6.15976041517047,0,3.94657198515496,9.61008249683553,2.54318281391474,2.70081986475962,5.46178404963726,7.47157566132325,8.74749224758472,5.90717162844432,13.3488697070842,1.51460264546469,5.61504381718026,7.43571861366535,5.68015348026583,3.32481924151213,3.56077243852024,0,0,0,0,0,0,0,0,0,6.25798129319264,13.5080597020506,2.76269842704961,12.0735661288315,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0,0.462942225792648,0.651616610620649,1.03993478527958,0,0.115930404975077,4.46153038096122,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.358234090811393,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,6.20504235637333,67.9547247118577,0.845302752556,3.45719551560332,2.08014873822732,1.54324424557285,0,0.266422179016099,8.86463560680515,9.22456729165453,0.823240336780769,0,6.75244702610837,1.58390374586686,0,0,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,5.70547620162874,0.723906533337896,0.205476322550383,2.86497541183833,0,0,0,0,0,0,0,0,0,0,0,0,5.64380861908043,4.50153468953709,0.542530047399471,3.74347550755453,3.92543775353756,2.05013139544115,1.63997980989798,10.2321673907424,31.8370505678379,1.03473071292505,1.32845119707087,2.02806085395873,3.99664626553181,1.95801157462741,2.05886054286514,0,0,0,0,0,0.30239029332968,9.17998888929474,6.29194090481056,8.13914273855913,6.27881831352935,10.2341449813341,9.49038134747284,7.42090332224955,0.308419387605311,2.13074070375753,0.0821271560138091,0.519254429183621,0.232420756919918,0,0,0,5.0518357192427,0.728364672026868,3.40923478894503,0,0,0,0,0,0,0,0.215915916102139,0,0.541892875087706,1.00337954770971,0,0,0,0,0,0,1.64007322849853,0.325378394664303,0.309123034943167,0,0.165018999841176,0,0,1.6068392984416,0.870036464629098,0.154048617114644,0.15350367472613,0.137836572484531,6.01553371262332,2.75531718437034,0.255679882248303,2.67096106940212,0.330569830721956,0.768760269460425,1.91419068741876,1.11273558941105,1.39453664789186,3.77774816196768,1.3940745403212,0,0,0,0.74129687641568,0.286249773483982,0.744316738719335,2.21465597303108,2.85945290885737,1.27948895655667,0,0.95460974377781,0,1.79872457583315,7.41249980287348,2.12062324222236,0.202182481573316,1.58510321173008,0,4.38870365180631,1.70599442741899,0,2.18399858252777,7.21167702963935,0,0.551365343546124,0,0,1.15755106853338,0.655894752046633,0,0.30982349809975,0.281695602532241,2.72481569187698,8.44941752712842,0,0.709522128141196,3.79993743535795,2.96365403663912,0.379473173765715,3.49934720244983,0.192444225451024,0,0,0.659006605437454,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0.23874448473769,0,0,0,0.281338832821026,0.111308705022906,0,0,1.59398390600856,1.10513566212459,0,0.102268682502155,0,0.622079175323615,0,0,0,0.295930216910801,0,4.44547960578548,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0.438770794307945,0,0,1.07730361905316,4.67162428972705,0,0,0,2.55200927785536,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0,0,0,0,0.789168805698781,0,0,3.47526187956684,0,0,0,0,0,0,0.284609546029793,0,0,0.489961987071888,0,0.34945333648406,0,0,0,0,0.0969890164884194,0.264768380074501,1.58186518546373,0.137041924646751,0.19871461170299,0,0,8.41667612641104,1.06726497369676,0,0,0,0,0,0,0,4.89255141865011,3.55649677461933,2.44795722327172,2.31160471921215,0,0.273810757783986,0,0.429765441419957,0,0.837847203816763,0.229160424011684,0,0,0,0,0,9.36779697210249,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,1.27134268827375,0,0,0.326587360109409,0,0,2.04465626142506,3.9659232032044,0.146552233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| |||
|short_description=p2@PODNL1 | |||
}} |
Latest revision as of 03:00, 16 September 2015
Short description: | p2@PODNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PODNL1_5end |
Coexpression cluster: | C1421_Mesenchymal_Preadipocyte_Fibroblast_tenocyte_Adipocyte_Osteoblast_Nucleus |
Association with transcript: | 117bp_to_ENST00000339560, NM_024825, uc002mxr.2_5end |
EntrezGene: | PODNL1 |
HGNC: | 26275 |
UniProt: | A8K3W6B7Z3M0Q6PEZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.75e-19 | 76 |
skin fibroblast | 1.56e-11 | 23 |
multi fate stem cell | 1.41e-10 | 427 |
somatic stem cell | 4.85e-10 | 433 |
stem cell | 2.35e-09 | 441 |
connective tissue cell | 5.09e-09 | 361 |
stromal cell | 6.77e-08 | 28 |
motile cell | 1.59e-07 | 386 |
hair follicle cell | 1.83e-07 | 5 |
GAG secreting cell | 3.15e-07 | 9 |
carbohydrate secreting cell | 3.15e-07 | 9 |
mesenchymal cell | 3.71e-07 | 354 |
preadipocyte | 6.03e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.05e-10 | 371 |
integument | 1.07e-09 | 46 |
integumental system | 1.07e-09 | 46 |
skin of body | 2.43e-09 | 41 |
omentum | 3.76e-09 | 6 |
peritoneum | 3.76e-09 | 6 |
abdominal cavity | 3.76e-09 | 6 |
visceral peritoneum | 3.76e-09 | 6 |
surface structure | 1.50e-07 | 99 |
hair follicle | 1.83e-07 | 5 |
hair follicle placode | 1.83e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.32e-07 | 5 |
myotonic disease | 8.32e-07 | 5 |
muscle tissue disease | 8.32e-07 | 5 |
myopathy | 8.32e-07 | 5 |
muscular disease | 8.32e-07 | 5 |
myotonic dystrophy | 8.32e-07 | 5 |