FFCP PHASE1:Hg19::chr19:14049032..14049055,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:14049032..14049055,- to FFCP PHASE1:Hg19::chr19:14049032..14049055,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79883 | |EntrezGene=79883 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26275 | |HGNC=26275 | ||
|TSSclassifier=strong | |||
|UniProt=Q6PEZ8 | |UniProt=Q6PEZ8 | ||
|association_with_transcript=-154bp_to_ENST00000254320,uc010xni.1_5end | |||
|cluster_id=chr19:14049032..14049055,- | |||
|description=CAGE_peak_4_at_PODNL1_5end | |||
|id=chr19:14049032..14049055,- | |||
|ontology_enrichment_celltype=CL:0000055!1.16e-18!180;CL:0000057!9.84e-15!75;CL:0002620!3.33e-09!23;CL:0000667!2.12e-07!6;CL:0000058!2.12e-07!6;CL:0000138!2.12e-07!6;CL:0000499!6.29e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000138;8.36e-12;6!CL:0002580;3.17e-09;3!CL:0000499;3.72e-09;28!CL:0002579;6.56e-09;3!CL:0002559;2.95e-08;5!CL:0000135;2.95e-08;3!CL:0000388;2.95e-08;3!CL:0000327;4.67e-08;15!CL:0002334;8.34e-08;12!CL:0000153;1.04e-07;9!CL:0000447;1.04e-07;9!CL:0002620;1.62e-07;23!CL:0000057;8.20e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.64e-16,76;CL:0000058,8.71e-12,6;CL:0000138,8.71e-12,6;CL:0002580,2.63e-09,3;CL:0002320,3.22e-09,361;CL:0000499,3.76e-09,28;CL:0002579,7.15e-09,3;CL:0002559,2.24e-08,5;CL:0000134,2.31e-08,354;CL:0000327,4.46e-08,15;CL:0000135,4.61e-08,3;CL:0000388,4.61e-08,3;CL:0002334,7.97e-08,12;CL:0000153,1.06e-07,9;CL:0000447,1.06e-07,9;CL:0000219,1.34e-07,386;CL:0002620,1.50e-07,23;CL:0000048,3.91e-07,427;CL:0000723,7.45e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.70e-08!365;UBERON:0003688!1.69e-07!6;UBERON:0002358!1.69e-07!6;UBERON:0003684!1.69e-07!6;UBERON:0001178!1.69e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.99e-11;6!UBERON:0002358;3.99e-11;6!UBERON:0003684;3.99e-11;6!UBERON:0001178;3.99e-11;6!UBERON:0002073;2.95e-08;5!UBERON:0007846;2.95e-08;3!UBERON:0000043;2.95e-08;3!UBERON:0007845;2.95e-08;3!UBERON:0004457;2.81e-07;9!UBERON:0000042;2.81e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.61e-11,6;UBERON:0002358,3.61e-11,6;UBERON:0003684,3.61e-11,6;UBERON:0001178,3.61e-11,6;UBERON:0002384,7.87e-10,371;UBERON:0002073,2.24e-08,5;UBERON:0005086,2.24e-08,5;UBERON:0007846,4.61e-08,3;UBERON:0000043,4.61e-08,3;UBERON:0007845,4.61e-08,3;UBERON:0002199,8.43e-08,46;UBERON:0002416,8.43e-08,46;UBERON:0002097,1.10e-07,41 | |||
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| ||
|short_description=p4@PODNL1 | |||
}} | }} |
Latest revision as of 02:58, 16 September 2015
Short description: | p4@PODNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PODNL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -154bp_to_ENST00000254320, uc010xni.1_5end |
EntrezGene: | PODNL1 |
HGNC: | 26275 |
UniProt: | Q6PEZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.64e-16 | 76 |
chondroblast | 8.71e-12 | 6 |
chondrocyte | 8.71e-12 | 6 |
preadipocyte of the breast | 2.63e-09 | 3 |
connective tissue cell | 3.22e-09 | 361 |
stromal cell | 3.76e-09 | 28 |
omentum preadipocyte | 7.15e-09 | 3 |
hair follicle cell | 2.24e-08 | 5 |
mesenchymal cell | 2.31e-08 | 354 |
extracellular matrix secreting cell | 4.46e-08 | 15 |
fibrocyte | 4.61e-08 | 3 |
tendon cell | 4.61e-08 | 3 |
preadipocyte | 7.97e-08 | 12 |
GAG secreting cell | 1.06e-07 | 9 |
carbohydrate secreting cell | 1.06e-07 | 9 |
motile cell | 1.34e-07 | 386 |
skin fibroblast | 1.50e-07 | 23 |
multi fate stem cell | 3.91e-07 | 427 |
somatic stem cell | 7.45e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.61e-11 | 6 |
peritoneum | 3.61e-11 | 6 |
abdominal cavity | 3.61e-11 | 6 |
visceral peritoneum | 3.61e-11 | 6 |
connective tissue | 7.87e-10 | 371 |
hair follicle | 2.24e-08 | 5 |
hair follicle placode | 2.24e-08 | 5 |
dense regular connective tissue | 4.61e-08 | 3 |
tendon | 4.61e-08 | 3 |
regular connective tissue | 4.61e-08 | 3 |
integument | 8.43e-08 | 46 |
integumental system | 8.43e-08 | 46 |
skin of body | 1.10e-07 | 41 |