FFCP PHASE1:Hg19::chr8:126104155..126104162,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=286053 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26513 | |||
|TSSclassifier=strong | |||
|UniProt=E5RG00 | |||
|association_with_transcript=34bp_to_ENST00000518146_5end | |||
|cluster_id=chr8:126104155..126104162,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_NSMCE2_5end | |||
|id=chr8:126104155..126104162,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.99e-23!140;CL:0000037!3.38e-21!172;CL:0000566!3.38e-21!172;CL:0002031!4.66e-21!124;CL:0002087!4.14e-20!119;CL:0002057!5.49e-20!42;CL:0000988!5.71e-20!182;CL:0002032!1.42e-19!165;CL:0000837!1.42e-19!165;CL:0000860!1.50e-19!45;CL:0000766!1.81e-17!76;CL:0000839!1.71e-15!70;CL:0002194!6.07e-15!63;CL:0000576!6.07e-15!63;CL:0000040!6.07e-15!63;CL:0000559!6.07e-15!63;CL:0002009!9.34e-15!65;CL:0000557!5.44e-14!71;CL:0000763!1.43e-13!112;CL:0000049!1.43e-13!112;CL:0000219!3.52e-08!390;CL:0000134!7.55e-08!358;CL:0002320!2.96e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.27e-53;33!CL:0002057;5.27e-53;33!CL:0000473;2.71e-37;39!CL:0000234;2.71e-37;39!CL:0000576;2.32e-27;48!CL:0000766;1.06e-19;69!CL:0002087;1.41e-13;104!CL:0000763;1.39e-09;100!CL:0000738;2.65e-09;136!CL:0000236;3.59e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.00e-53,42;CL:0002057,2.00e-53,42;CL:0000473,1.34e-48,48;CL:0000234,1.34e-48,48;CL:0000766,6.73e-40,72;CL:0000738,9.63e-38,136;CL:0002194,6.20e-37,59;CL:0000576,6.20e-37,59;CL:0000040,6.20e-37,59;CL:0000559,6.20e-37,59;CL:0000839,1.69e-36,66;CL:0002009,1.97e-35,61;CL:0002087,3.32e-35,115;CL:0002031,5.66e-35,120;CL:0000557,1.16e-33,67;CL:0000037,3.55e-32,168;CL:0002032,2.51e-31,161;CL:0000837,2.51e-31,161;CL:0000988,8.29e-30,177;CL:0000763,7.94e-28,108;CL:0000049,7.94e-28,108;CL:0000134,2.68e-12,354;CL:0002320,9.02e-12,361;CL:0000219,3.43e-11,386;CL:0000048,8.77e-09,427;CL:0000034,1.25e-08,441;CL:0000723,1.86e-08,433;CL:0000236,9.29e-08,14 | |||
|ontology_enrichment_development_v019=CL:0002057;6.46e-38;42!CL:0000049;1.84e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.91e-12!86;UBERON:0002371!3.75e-11!80;UBERON:0004765!8.21e-10!101;UBERON:0001434!8.21e-10!101;UBERON:0002390!1.73e-09!102;UBERON:0003061!1.73e-09!102;UBERON:0002193!2.26e-08!112;UBERON:0002384!1.11e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.19e-29,82;UBERON:0002371,1.38e-28,76;UBERON:0004765,6.58e-26,90;UBERON:0002405,3.10e-23,93;UBERON:0002390,5.34e-23,98;UBERON:0003061,5.34e-23,98;UBERON:0001434,2.38e-22,100;UBERON:0002193,5.58e-20,108;UBERON:0002384,4.70e-11,371;UBERON:0002204,1.80e-10,167;UBERON:0003081,3.89e-07,203 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0,0,0.0764134057479513,0.410502947249729,0.0787107813136792,0.786728553697808,1.91914699048606,0.619264493264304,0,0,0,0.619737604642413,0.142169232487422,0.587200878669695,1.66198622559563,1.00272223735071,0.868043482863407,0.447830948479849,0.32389366601898,0.257575567634187,1.01778767145695,3.02300754951048,0.970336244751265,1.85943229524548,4.11167888021826,5.57471467611186,1.7261543539329,3.33008918487831,5.20260905754887,1.72372840368309,5.16387746867061,4.06279459783025,1.88242339542605,6.5497476013883,7.86532195557796,2.44867113896722,8.66508373105453,4.47535988059329,0.329851300186716,2.79249120670285,2.98357325372886,1.7412554317715,5.10646702222026,6.85104473895132,3.76872997885115,2.08593167368081,6.73285418585862,1.21079900526674,5.15588690382591,4.1140110367315,1.47878700418359,0,0.209658645508376,0.22465726229299,0.150176892841506,0.803627933485401,0.285012743741249,0.19891667719909,0,1.75996244461323,0.546138611262131,0.889509253863555,0.426730222566507,0,2.87376219977242,0.661044872784862,1.90810750907073,1.70763890732835,1.17447437874188,1.52909291250092,0,3.36305137788922,0.790152254325231,0.786839080455332,0,0.616804496998528,1.5046784585161,0.977766799900771,0.946895611469467,0,1.22551502573691,1.47302953737419,0.443067789167242,0.812411591295047,0.128091319725675,0.390178042679635,0,1.10540007114339,0.579606171470105,2.22429844743091,0.267540828089713,0,0.906474741580529,0,1.71813722741315,0.506039384039006,0.318565414324097,0,0,0.602300476311091,0.255973222308837,1.24930726552346,0,0.821127996921047,1.20964045934839,0.534880391567015,0.724122019413995,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.144846518960824,1.5905718941022,0,0.283604451492204,0.221729397462564,0.087834785693126,0.327447688744282,0,0,0.324547393654683,0,0.26591592103773,0,0.571994910780128,1.11437250398869,0.39752481473341,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0,0,0,0,0,0,0.357198913136319,0.22452937262617,0.112611480483322,0,0.949265659568129,0.183201743930407,1.31780417436063,3.87780264148325,0,0.496971951695318,0.379891534993739,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0.485618833104395,0,0,0.245668634623536,0,0,0.247266929278557,0,0,0.505008341862199,0.125118519871964,0.277064115484183,0,0,0,0.453728732640084,0.179389635688862,0,0.423863802319124,0.900273288253207,0.618315175430633,0.257640540045629,0.37223371266318,0.506328996723799,0.292311015483596,0.252433774244115,0.0920498986422993,0.161646056818812,1.06502877754984,0,0,0.193260853163297,0.272746120590835,0,0.243947412259191,0.662648841607426,0.580969714347592,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0.505754070234305,0.482022059766964,0.330881918197182,0.435758888184812,0.237270619111097,0.674156540800822,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0,0,0,0,0,0,0,0,1.04337364477569,0.117408694235822,0,0.462985512576611,0.190254152234598,0,0,0.246217006087397,0.936017060556951,0.297262324577456,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,1.47798971368783,0.176096868026452,0,0.144119953416961,0.37872730027914,0.126995788584338,0,0,0,0.205654985406647,0,0.571652865261156,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,3.48613383440118,0.299918973546171,1.2162378064119,0.502257091432126,0,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,2.1673383622212,1.2937654491571,0.898401253958239,1.27047312111232,0,0.773288812777695,0,0.637938751653163,0.749007023947182,0,2.07207756718018,0.36807447515742,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0,0,0,1.03473071292505,0,0.368738337083406,0.434418072340414,0,0,0,1.07857100409308,0.533637789017222,0.303127571446259,3.32870879020994,0,0.744323423456331,1.38115775959256,0,0.384417447767103,0,0,0,0.462629081407967,0.355123450626254,0.164254312027618,0.519254429183621,0.232420756919918,0.241718899183244,1.00253235151642,0,0.229628896329213,0.546273504020151,0.524497659837696,0,0.15403067420883,0,0,0.316654886678627,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,1.09629938322967,0.522870902049801,0.512900250232778,0,0.650756789328606,0.206082023295445,0.457847324091717,1.23764249880882,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0.15350367472613,0.275673144969061,0.214840489736547,0.290033387828457,0,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0.869932992075073,0,0,0.744316738719335,1.2655176988749,0,0,0,0,0.78494864019923,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0.430234056612155,0.196498082026242,0,0,0.844430541190656,0,0,0.349934720244983,0.192444225451024,0,0,0,0,0,0,0,0,0.764637207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| |||
|short_description=p4@NSMCE2 | |||
}} |
Latest revision as of 02:53, 16 September 2015
Short description: | p4@NSMCE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NSMCE2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 34bp_to_ENST00000518146_5end |
EntrezGene: | NSMCE2 |
HGNC: | 26513 |
UniProt: | E5RG00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.00e-53 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.00e-53 | 42 |
defensive cell | 1.34e-48 | 48 |
phagocyte | 1.34e-48 | 48 |
myeloid leukocyte | 6.73e-40 | 72 |
leukocyte | 9.63e-38 | 136 |
monopoietic cell | 6.20e-37 | 59 |
monocyte | 6.20e-37 | 59 |
monoblast | 6.20e-37 | 59 |
promonocyte | 6.20e-37 | 59 |
myeloid lineage restricted progenitor cell | 1.69e-36 | 66 |
macrophage dendritic cell progenitor | 1.97e-35 | 61 |
nongranular leukocyte | 3.32e-35 | 115 |
hematopoietic lineage restricted progenitor cell | 5.66e-35 | 120 |
granulocyte monocyte progenitor cell | 1.16e-33 | 67 |
hematopoietic stem cell | 3.55e-32 | 168 |
hematopoietic oligopotent progenitor cell | 2.51e-31 | 161 |
hematopoietic multipotent progenitor cell | 2.51e-31 | 161 |
hematopoietic cell | 8.29e-30 | 177 |
myeloid cell | 7.94e-28 | 108 |
common myeloid progenitor | 7.94e-28 | 108 |
mesenchymal cell | 2.68e-12 | 354 |
connective tissue cell | 9.02e-12 | 361 |
motile cell | 3.43e-11 | 386 |
multi fate stem cell | 8.77e-09 | 427 |
stem cell | 1.25e-08 | 441 |
somatic stem cell | 1.86e-08 | 433 |
B cell | 9.29e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.19e-29 | 82 |
bone marrow | 1.38e-28 | 76 |
skeletal element | 6.58e-26 | 90 |
immune system | 3.10e-23 | 93 |
hematopoietic system | 5.34e-23 | 98 |
blood island | 5.34e-23 | 98 |
skeletal system | 2.38e-22 | 100 |
hemolymphoid system | 5.58e-20 | 108 |
connective tissue | 4.70e-11 | 371 |
musculoskeletal system | 1.80e-10 | 167 |
lateral plate mesoderm | 3.89e-07 | 203 |