FFCP PHASE1:Hg19::chr20:36758065..36758096,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:36758065..36758096,-
|short_description=p4@TGM2
|description=CAGE_peak_4_at_TGM2_5end
|association_with_transcript=324bp_to_M98479_5end
|EntrezGene=7052
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7052 | |EntrezGene=7052 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11778 | |HGNC=11778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=324bp_to_M98479_5end | |||
|cluster_id=chr20:36758065..36758096,- | |||
|description=CAGE_peak_4_at_TGM2_5end | |||
|id=chr20:36758065..36758096,- | |||
|ontology_enrichment_celltype=CL:0002139!4.40e-09!24;CL:0000359!2.88e-08!32;CL:0000192!5.82e-08!42;CL:0000514!5.82e-08!42;CL:0000222!6.54e-08!119;CL:0000071!4.88e-07!18;CL:0002546!4.88e-07!18;CL:0000115!6.25e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.29e-14;19!CL:0002139;1.17e-08;24!CL:0002577;7.48e-08;3!CL:0000115;1.32e-07;36!CL:0002541;1.44e-07;3!CL:0000359;2.49e-07;32!CL:0002595;5.29e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.86e-14,19;CL:0002139,1.12e-08,24;CL:0000115,4.90e-08,36;CL:0002577,7.57e-08,3;CL:0002541,1.27e-07,3;CL:0000222,1.44e-07,121;CL:0000359,1.82e-07,32;CL:0002595,5.22e-07,5;CL:0002078,8.39e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!4.69e-20!118;UBERON:0002049!4.03e-18!79;UBERON:0007798!4.03e-18!79;UBERON:0004872!3.97e-17!84;UBERON:0000055!1.08e-16!69;UBERON:0001009!2.16e-15!113;UBERON:0000477!1.16e-14!286;UBERON:0004111!2.12e-14!241;UBERON:0004535!2.15e-14!110;UBERON:0001981!2.78e-14!60;UBERON:0007500!2.78e-14!60;UBERON:0004537!2.78e-14!60;UBERON:0006965!2.78e-14!60;UBERON:0000490!5.99e-13!138;UBERON:0000119!1.02e-12!312;UBERON:0000483!3.43e-12!309;UBERON:0005256!9.15e-12!143;UBERON:0005631!1.29e-11!14;UBERON:0000158!1.29e-11!14;UBERON:0000468!3.62e-11!659;UBERON:0000467!7.79e-11!625;UBERON:0002100!7.83e-11!216;UBERON:0000480!1.06e-10!626;UBERON:0000025!1.57e-10!194;UBERON:0001637!3.35e-09!42;UBERON:0003509!3.35e-09!42;UBERON:0004572!3.35e-09!42;UBERON:0000481!4.90e-09!347;UBERON:0000923!1.07e-07!604;UBERON:0005291!1.07e-07!604;UBERON:0006598!1.07e-07!604;UBERON:0002532!1.07e-07!604;UBERON:0003124!1.32e-07!7;UBERON:0002050!1.39e-07!605;UBERON:0005423!1.39e-07!605;UBERON:0004923!1.52e-07!57;UBERON:0000478!2.63e-07!24;UBERON:0004573!4.36e-07!33;UBERON:0004571!4.36e-07!33;UBERON:0001986!4.88e-07!18;UBERON:0004638!4.88e-07!18;UBERON:0004852!4.88e-07!18;UBERON:0000926!6.70e-07!448;UBERON:0004120!6.70e-07!448;UBERON:0006603!6.70e-07!448;UBERON:0000922!8.20e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.52e-12;24!UBERON:0005631;1.97e-10;10!UBERON:0000158;1.97e-10;10!UBERON:0001987;1.07e-09;4!UBERON:0004573;5.42e-09;33!UBERON:0004571;5.42e-09;33!UBERON:0000055;2.39e-08;65!UBERON:0002049;3.26e-08;75!UBERON:0007798;3.26e-08;75!UBERON:0000077;3.41e-08;27!UBERON:0001637;5.98e-08;42!UBERON:0003509;5.98e-08;42!UBERON:0004572;5.98e-08;42!UBERON:0003124;1.44e-07;3!UBERON:0000920;1.44e-07;3!UBERON:0007500;1.47e-07;56!UBERON:0001981;1.47e-07;56!UBERON:0004537;1.47e-07;56!UBERON:0003914;1.72e-07;74!UBERON:0003513;1.92e-07;7!UBERON:0003834;5.29e-07;5!UBERON:0001533;5.29e-07;5!UBERON:0003937;8.34e-07;12!UBERON:0005399;8.34e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,9.62e-19,117;UBERON:0005631,7.77e-18,14;UBERON:0000158,7.77e-18,14;UBERON:0004872,7.84e-17,83;UBERON:0003124,1.22e-15,7;UBERON:0002049,3.43e-15,78;UBERON:0007798,3.43e-15,78;UBERON:0000055,1.38e-14,68;UBERON:0004535,6.51e-13,109;UBERON:0000478,1.34e-12,24;UBERON:0007500,1.37e-12,59;UBERON:0001981,1.37e-12,59;UBERON:0004537,1.37e-12,59;UBERON:0006965,1.37e-12,59;UBERON:0001009,2.60e-12,112;UBERON:0002100,6.47e-12,199;UBERON:0001637,7.23e-12,42;UBERON:0003509,7.23e-12,42;UBERON:0004572,7.23e-12,42;UBERON:0004111,1.95e-11,240;UBERON:0005256,2.42e-11,122;UBERON:0000490,5.16e-11,148;UBERON:0003104,2.36e-10,160;UBERON:0009142,2.36e-10,160;UBERON:0004573,6.14e-10,33;UBERON:0004571,6.14e-10,33;UBERON:0006554,8.33e-10,47;UBERON:0001987,1.07e-09,4;UBERON:0004340,1.07e-09,4;UBERON:0001008,1.68e-09,48;UBERON:0000025,7.23e-09,192;UBERON:0000483,1.32e-08,306;UBERON:0000926,1.97e-08,315;UBERON:0004120,1.97e-08,315;UBERON:0006603,1.97e-08,315;UBERON:0000119,2.22e-08,309;UBERON:0003064,6.27e-08,28;UBERON:0003081,7.63e-08,203;UBERON:0000920,1.27e-07,3;UBERON:0000077,1.73e-07,29;UBERON:0003513,1.84e-07,7;UBERON:0009569,2.05e-07,112;UBERON:0003834,5.22e-07,5;UBERON:0001533,5.22e-07,5;UBERON:0003937,9.26e-07,12;UBERON:0005399,9.26e-07,12 | |||
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| ||
|short_description=p4@TGM2 | |||
}} | }} |
Latest revision as of 02:49, 16 September 2015
Short description: | p4@TGM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TGM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 324bp_to_M98479_5end |
EntrezGene: | TGM2 |
HGNC: | 11778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.86e-14 | 19 |
endothelial cell of vascular tree | 1.12e-08 | 24 |
endothelial cell | 4.90e-08 | 36 |
placental epithelial cell | 7.57e-08 | 3 |
chorionic membrane mesenchymal stem cell | 1.27e-07 | 3 |
mesodermal cell | 1.44e-07 | 121 |
vascular associated smooth muscle cell | 1.82e-07 | 32 |
smooth muscle cell of the subclavian artery | 5.22e-07 | 5 |
meso-epithelial cell | 8.39e-07 | 45 |