FFCP PHASE1:Hg19::chr12:95945246..95945270,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84101 | |EntrezGene=84101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20064 | |HGNC=20064 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H0E7 | |UniProt=Q9H0E7 | ||
|association_with_transcript=0bp_to_ENST00000258499,NM_032147,uc001teh.2_5end | |association_with_transcript=0bp_to_ENST00000258499,NM_032147,uc001teh.2_5end | ||
|cluster_id=chr12:95945246..95945270,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_4_at_USP44_5end | |description=CAGE_peak_4_at_USP44_5end | ||
|id=chr12:95945246..95945270,- | |id=chr12:95945246..95945270,- | ||
|ontology_enrichment_celltype=CL:0002322!3.59e-33!5;CL:0000039!9.73e-15!7;CL:0000586!9.73e-15!7;CL:0000540!1.80e-10!6;CL:0000031!1.80e-10!6;CL:0000404!1.80e-10!6;CL:0000047!5.81e-08!8;CL:0000819!1.30e-07!1;CL:0002127!2.80e-07!1;CL:0000914!2.80e-07!1;CL:0000911!2.80e-07!1;CL:0000814!2.80e-07!1;CL:0002042!2.80e-07!1;CL:0002039!2.80e-07!1;CL:0002040!2.80e-07!1;CL:0002041!2.80e-07!1 | |ontology_enrichment_celltype=CL:0002322!3.59e-33!5;CL:0000039!9.73e-15!7;CL:0000586!9.73e-15!7;CL:0000540!1.80e-10!6;CL:0000031!1.80e-10!6;CL:0000404!1.80e-10!6;CL:0000047!5.81e-08!8;CL:0000819!1.30e-07!1;CL:0002127!2.80e-07!1;CL:0000914!2.80e-07!1;CL:0000911!2.80e-07!1;CL:0000814!2.80e-07!1;CL:0002042!2.80e-07!1;CL:0002039!2.80e-07!1;CL:0002040!2.80e-07!1;CL:0002041!2.80e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.05e-53;5!CL:0002321;6.27e-18;15!CL:0000540;1.18e-16;6!CL:0000404;1.18e-16;6!CL:0000039;5.32e-14;7!CL:0000586;5.32e-14;7!CL:0000785;1.63e-11;1!CL:0000819;1.63e-11;1!CL:0000148;2.66e-10;10!CL:0000147;1.69e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.05e-53,5;CL:0000540,1.18e-16,6;CL:0000031,1.18e-16,6;CL:0000404,1.18e-16,6;CL:0000039,5.68e-14,7;CL:0000586,5.68e-14,7;CL:0000047,1.22e-12,8;CL:0000819,1.63e-11,1;CL:0000148,2.57e-10,10;CL:0000541,2.57e-10,10;CL:0000147,1.65e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.03e-37;10!UBERON:0005564;6.03e-37;10!CL:0000031;1.18e-16;6 | |||
|ontology_enrichment_disease=DOID:3095!7.94e-10!22;DOID:2994!7.94e-10!22;DOID:2531!2.54e-08!51;DOID:0060083!2.54e-08!51;DOID:0060073!1.30e-07!1;DOID:8675!1.30e-07!1;DOID:3371!2.47e-07!1;DOID:4549!2.47e-07!1;DOID:5861!2.47e-07!1;DOID:6496!2.47e-07!1;DOID:1240!6.87e-07!39 | |ontology_enrichment_disease=DOID:3095!7.94e-10!22;DOID:2994!7.94e-10!22;DOID:2531!2.54e-08!51;DOID:0060083!2.54e-08!51;DOID:0060073!1.30e-07!1;DOID:8675!1.30e-07!1;DOID:3371!2.47e-07!1;DOID:4549!2.47e-07!1;DOID:5861!2.47e-07!1;DOID:6496!2.47e-07!1;DOID:1240!6.87e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:0060073;1.63e-11;1!DOID:8675;1.63e-11;1!DOID:3095;9.17e-08;22!DOID:2994;9.17e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.63e-11,1;DOID:8675,1.63e-11,1;DOID:3095,9.25e-08,22;DOID:2994,9.25e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.80e-28!8;UBERON:0003135!1.94e-20!11;UBERON:0000991!4.76e-14!21;UBERON:0009196!4.76e-14!21;UBERON:0009117!4.76e-14!21;UBERON:0005564!4.76e-14!21;UBERON:0004176!2.26e-13!22;UBERON:0003101!5.93e-10!22;UBERON:0000079!5.93e-10!22;UBERON:0002370!7.29e-07!4;UBERON:0005058!7.29e-07!4;UBERON:0009113!7.29e-07!4;UBERON:0003295!7.29e-07!4;UBERON:0005562!7.29e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.63e-32;8!UBERON:0003135;1.15e-23;11!UBERON:0000991;1.86e-17;21!UBERON:0003101;8.15e-12;22!UBERON:0000079;8.15e-12;22!UBERON:0000922;9.29e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.74e-32,8;UBERON:0003135,1.21e-23,11;UBERON:0000991,1.86e-17,21;UBERON:0009196,1.86e-17,21;UBERON:0009117,1.86e-17,21;UBERON:0005564,1.86e-17,21;UBERON:0004176,1.19e-16,22;UBERON:0003101,8.34e-12,22;UBERON:0000079,8.34e-12,22;UBERON:0002323,9.20e-08,46;UBERON:0003133,2.02e-07,48;UBERON:0004458,2.92e-07,49 | |||
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|short_description=p4@USP44 | |short_description=p4@USP44 | ||
}} | }} |
Latest revision as of 02:44, 16 September 2015
Short description: | p4@USP44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_USP44_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000258499, NM_032147, uc001teh.2_5end |
EntrezGene: | USP44 |
HGNC: | 20064 |
UniProt: | Q9H0E7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.05e-53 | 5 |
neuron | 1.18e-16 | 6 |
neuroblast | 1.18e-16 | 6 |
electrically signaling cell | 1.18e-16 | 6 |
germ line cell | 5.68e-14 | 7 |
germ cell | 5.68e-14 | 7 |
neuronal stem cell | 1.22e-12 | 8 |
B-1 B cell | 1.63e-11 | 1 |
melanocyte | 2.57e-10 | 10 |
melanoblast | 2.57e-10 | 10 |
pigment cell | 1.65e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 1.74e-32 | 8 |
male reproductive organ | 1.21e-23 | 11 |
gonad | 1.86e-17 | 21 |
indifferent external genitalia | 1.86e-17 | 21 |
indifferent gonad | 1.86e-17 | 21 |
gonad primordium | 1.86e-17 | 21 |
external genitalia | 1.19e-16 | 22 |
male organism | 8.34e-12 | 22 |
male reproductive system | 8.34e-12 | 22 |
body cavity | 9.20e-08 | 46 |
reproductive organ | 2.02e-07 | 48 |
body cavity or lining | 2.92e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.63e-11 | 1 |
lymphosarcoma | 1.63e-11 | 1 |
germ cell and embryonal cancer | 9.25e-08 | 22 |
germ cell cancer | 9.25e-08 | 22 |