FFCP PHASE1:Hg19::chr12:95945196..95945210,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84101 | |EntrezGene=84101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20064 | |HGNC=20064 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H0E7 | |UniProt=Q9H0E7 | ||
|association_with_transcript=52bp_to_NM_032147,uc001teh.2_5end | |association_with_transcript=52bp_to_NM_032147,uc001teh.2_5end | ||
|cluster_id=chr12:95945196..95945210,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_5_at_USP44_5end | |description=CAGE_peak_5_at_USP44_5end | ||
|id=chr12:95945196..95945210,- | |id=chr12:95945196..95945210,- | ||
|ontology_enrichment_celltype=CL:0002322;7.02e-83;5!CL:0002321;7.74e-28;15!CL:0000540;1.35e-25;6!CL:0000404;1.35e-25;6!CL:0000039;1.49e-21;7!CL:0000586;1.49e-21;7!CL:0000148;1.20e-15;10!CL:0000147;2.32e-11;14!CL:0000710;4.00e-08;20 | |ontology_enrichment_celltype=CL:0002322!2.47e-37!5;CL:0000039!7.18e-17!7;CL:0000586!7.18e-17!7;CL:0000540!7.86e-12!6;CL:0000031!7.86e-12!6;CL:0000404!7.86e-12!6;CL:0000047!5.44e-09!8;CL:0000148!2.86e-07!10;CL:0000541!2.86e-07!10 | ||
| | |ontology_enrichment_celltype_v019=CL:0002322;7.02e-83;5!CL:0002321;7.74e-28;15!CL:0000540;1.35e-25;6!CL:0000404;1.35e-25;6!CL:0000039;1.49e-21;7!CL:0000586;1.49e-21;7!CL:0000148;1.20e-15;10!CL:0000147;2.32e-11;14!CL:0000710;4.00e-08;20 | ||
|ontology_enrichment_disease=DOID:3095;2.78e-07;22!DOID:2994;2.78e-07;22 | |ontology_enrichment_celltype_v019_2=CL:0002322,7.64e-83,5;CL:0000540,1.30e-25,6;CL:0000031,1.30e-25,6;CL:0000404,1.30e-25,6;CL:0000039,1.54e-21,7;CL:0000586,1.54e-21,7;CL:0000047,2.13e-19,8;CL:0000148,1.23e-15,10;CL:0000541,1.23e-15,10;CL:0000147,2.36e-11,14;CL:0000133,1.17e-09,59;CL:0000710,4.05e-08,20;CL:0000221,6.42e-08,72 | ||
|ontology_enrichment_uberon=UBERON:0000473;5.93e-19;8!UBERON:0003135;5.65e-14;11!UBERON:0000922;3.48e-12;49!UBERON:0000991;1.33e-07;21!UBERON:0003101;2.78e-07;22!UBERON:0000079;2.78e-07;22 | |ontology_enrichment_development_v019=CL:0000031;1.35e-25;6!UBERON:0009117;2.64e-15;10!UBERON:0005564;2.64e-15;10 | ||
|ontology_enrichment_disease=DOID:3095!2.16e-11!22;DOID:2994!2.16e-11!22;DOID:3371!2.64e-08!1;DOID:4549!2.64e-08!1;DOID:5861!2.64e-08!1;DOID:6496!2.64e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.78e-07;22!DOID:2994;2.78e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.81e-07,22;DOID:2994,2.81e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!6.00e-32!8;UBERON:0003135!3.97e-23!11;UBERON:0000991!4.92e-16!21;UBERON:0009196!4.92e-16!21;UBERON:0009117!4.92e-16!21;UBERON:0005564!4.92e-16!21;UBERON:0004176!2.86e-15!22;UBERON:0003101!2.51e-11!22;UBERON:0000079!2.51e-11!22;UBERON:0003133!1.84e-08!48;UBERON:0002370!9.19e-08!4;UBERON:0005058!9.19e-08!4;UBERON:0009113!9.19e-08!4;UBERON:0003295!9.19e-08!4;UBERON:0005562!9.19e-08!4;UBERON:0002323!7.09e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.93e-19;8!UBERON:0003135;5.65e-14;11!UBERON:0000922;3.48e-12;49!UBERON:0000991;1.33e-07;21!UBERON:0003101;2.78e-07;22!UBERON:0000079;2.78e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.12e-19,8;UBERON:0003135,5.78e-14,11;UBERON:0000991,1.34e-07,21;UBERON:0009196,1.34e-07,21;UBERON:0009117,1.34e-07,21;UBERON:0005564,1.34e-07,21;UBERON:0004176,2.81e-07,22;UBERON:0003101,2.81e-07,22;UBERON:0000079,2.81e-07,22 | |||
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|short_description=p5@USP44 | |short_description=p5@USP44 | ||
}} | }} |
Latest revision as of 02:41, 16 September 2015
Short description: | p5@USP44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_USP44_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 52bp_to_NM_032147, uc001teh.2_5end |
EntrezGene: | USP44 |
HGNC: | 20064 |
UniProt: | Q9H0E7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.64e-83 | 5 |
neuron | 1.30e-25 | 6 |
neuroblast | 1.30e-25 | 6 |
electrically signaling cell | 1.30e-25 | 6 |
germ line cell | 1.54e-21 | 7 |
germ cell | 1.54e-21 | 7 |
neuronal stem cell | 2.13e-19 | 8 |
melanocyte | 1.23e-15 | 10 |
melanoblast | 1.23e-15 | 10 |
pigment cell | 2.36e-11 | 14 |
neurectodermal cell | 1.17e-09 | 59 |
neurecto-epithelial cell | 4.05e-08 | 20 |
ectodermal cell | 6.42e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 6.12e-19 | 8 |
male reproductive organ | 5.78e-14 | 11 |
gonad | 1.34e-07 | 21 |
indifferent external genitalia | 1.34e-07 | 21 |
indifferent gonad | 1.34e-07 | 21 |
gonad primordium | 1.34e-07 | 21 |
external genitalia | 2.81e-07 | 22 |
male organism | 2.81e-07 | 22 |
male reproductive system | 2.81e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.81e-07 | 22 |
germ cell cancer | 2.81e-07 | 22 |