FFCP PHASE1:Hg19::chr2:103089739..103089749,+: Difference between revisions
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|id=chr2:103089739..103089749,+
|short_description=p4@SLC9A4
|description=CAGE_peak_4_at_SLC9A4_5end
|association_with_transcript=-12bp_to_ENST00000295269,NM_001011...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=389015 | |EntrezGene=389015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11077 | |HGNC=11077 | ||
|TSSclassifier=strong | |||
|UniProt=Q6AI14 | |UniProt=Q6AI14 | ||
|association_with_transcript=-12bp_to_ENST00000295269,NM_001011552,uc002tbz.3_5end | |||
|cluster_id=chr2:103089739..103089749,+ | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_4_at_SLC9A4_5end | |||
|id=chr2:103089739..103089749,+ | |||
|ontology_enrichment_celltype=CL:1000507!1.24e-07!12;CL:1000494!1.24e-07!12;CL:0002681!4.42e-07!13;CL:0002584!4.42e-07!13 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.34e-66;1!UBERON:0004161;2.55e-07;11 | |||
|ontology_enrichment_disease=DOID:0050619!5.05e-11!1;DOID:1357!5.05e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:5409;7.35e-18;4!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,7.35e-18,4;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0002110!3.88e-14!3;UBERON:0006242!3.88e-14!3;UBERON:0001764!5.05e-11!1;UBERON:0001825!5.05e-11!1;UBERON:0002372!1.77e-10!1;UBERON:0001961!1.77e-10!1;UBERON:0001744!1.77e-10!1;UBERON:0001735!1.77e-10!1;UBERON:0005177!3.78e-09!107;UBERON:0002113!9.86e-09!27;UBERON:0003918!9.86e-09!27;UBERON:0005095!9.86e-09!27;UBERON:0007687!9.86e-09!27;UBERON:0005172!7.26e-08!55;UBERON:0005173!7.26e-08!55;UBERON:0000464!9.93e-08!104;UBERON:0003104!1.12e-07!238;UBERON:0009142!1.12e-07!238;UBERON:0009773!1.24e-07!12;UBERON:0001231!1.24e-07!12;UBERON:0004810!1.24e-07!12;UBERON:0006554!2.39e-07!44;UBERON:0000489!2.42e-07!32;UBERON:0001008!3.56e-07!45;UBERON:0000077!3.57e-07!130;UBERON:0001225!4.42e-07!13;UBERON:0008987!4.42e-07!13;UBERON:0009569!4.95e-07!113;UBERON:0002417!5.11e-07!61;UBERON:0000916!5.11e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;3.66e-23;3!UBERON:0000945;1.71e-14;5!UBERON:0010039;1.71e-14;5!UBERON:0002294;9.43e-11;7!UBERON:0001173;9.43e-11;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,3.27e-23,3;UBERON:0006242,3.27e-23,3;UBERON:0000945,1.47e-09,8;UBERON:0010039,1.47e-09,8;UBERON:0002294,1.12e-08,9;UBERON:0001173,1.12e-08,9;UBERON:0004912,1.12e-08,9 | |||
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|short_description=p4@SLC9A4 | |||
}} | }} |
Latest revision as of 02:41, 16 September 2015
Short description: | p4@SLC9A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC9A4_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | -12bp_to_ENST00000295269, NM_001011552, uc002tbz.3_5end |
EntrezGene: | SLC9A4 |
HGNC: | 11077 |
UniProt: | Q6AI14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gallbladder | 3.27e-23 | 3 |
gall bladder primordium | 3.27e-23 | 3 |
stomach | 1.47e-09 | 8 |
food storage organ | 1.47e-09 | 8 |
biliary system | 1.12e-08 | 9 |
biliary tree | 1.12e-08 | 9 |
biliary bud | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.35e-18 | 4 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |