FFCP PHASE1:Hg19::chr1:227505915..227505941,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8476 | |EntrezGene=8476 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1737 | |HGNC=1737 | ||
|TSSclassifier=strong | |||
|UniProt=E9PEF7,Q5VT25 | |UniProt=E9PEF7,Q5VT25 | ||
|association_with_transcript=-89bp_to_ENST00000334218,ENST00000366762,ENST00000366764,ENST00000366766,NM_003607,NM_014826,uc001hqr.2,uc001hqs.2,uc009xes.2,uc010pvs.1_5end | |association_with_transcript=-89bp_to_ENST00000334218,ENST00000366762,ENST00000366764,ENST00000366766,NM_003607,NM_014826,uc001hqr.2,uc001hqs.2,uc009xes.2,uc010pvs.1_5end | ||
|cluster_id=chr1:227505915..227505941,- | |||
|description=CAGE_peak_4_at_CDC42BPA_5end | |description=CAGE_peak_4_at_CDC42BPA_5end | ||
|id=chr1:227505915..227505941,- | |id=chr1:227505915..227505941,- | ||
|ontology_enrichment_celltype=CL:0002139!2.74e-10!24;CL:0000071!5.29e-09!18;CL:0002546!5.29e-09!18;CL:0000115!2.28e-08!35;CL:0002078!5.43e-07!44 | |ontology_enrichment_celltype=CL:0002139!2.74e-10!24;CL:0000071!5.29e-09!18;CL:0002546!5.29e-09!18;CL:0000115!2.28e-08!35;CL:0002078!5.43e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.18e-10;24!CL:0000071;7.11e-10;18!CL:0000115;7.53e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.06e-11,24;CL:0000071,6.12e-10,18;CL:0002546,6.12e-10,18;CL:0000115,1.94e-09,36;CL:0002078,5.14e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;7.11e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!8.23e-17!241;UBERON:0000025!6.94e-16!194;UBERON:0007023!3.74e-15!115;UBERON:0000477!2.23e-14!286;UBERON:0001049!9.46e-14!57;UBERON:0005068!9.46e-14!57;UBERON:0006241!9.46e-14!57;UBERON:0007135!9.46e-14!57;UBERON:0000955!1.35e-13!69;UBERON:0006238!1.35e-13!69;UBERON:0001017!3.14e-13!82;UBERON:0000073!5.08e-13!94;UBERON:0001016!5.08e-13!94;UBERON:0002616!1.27e-12!59;UBERON:0003080!6.04e-12!42;UBERON:0005743!7.16e-12!86;UBERON:0002780!1.49e-11!41;UBERON:0001890!1.49e-11!41;UBERON:0006240!1.49e-11!41;UBERON:0000119!1.11e-10!312;UBERON:0000483!1.15e-10!309;UBERON:0000475!2.64e-10!365;UBERON:0000468!5.75e-10!659;UBERON:0001893!1.36e-09!34;UBERON:0002020!1.72e-09!34;UBERON:0003528!1.72e-09!34;UBERON:0000467!1.93e-09!625;UBERON:0002791!2.87e-09!33;UBERON:0000480!3.34e-09!626;UBERON:0001986!5.29e-09!18;UBERON:0004638!5.29e-09!18;UBERON:0004852!5.29e-09!18;UBERON:0001869!1.06e-08!32;UBERON:0003075!1.54e-08!86;UBERON:0007284!1.54e-08!86;UBERON:0004121!3.29e-08!169;UBERON:0002619!3.29e-08!22;UBERON:0001950!3.44e-08!20;UBERON:0002346!4.80e-08!90;UBERON:0000924!6.30e-08!173;UBERON:0006601!6.30e-08!173;UBERON:0000481!6.67e-08!347;UBERON:0000487!9.03e-08!22;UBERON:0000033!3.20e-07!123;UBERON:0006914!3.82e-07!25;UBERON:0000956!4.37e-07!25;UBERON:0000203!4.37e-07!25;UBERON:0000922!4.99e-07!612;UBERON:0002050!7.17e-07!605;UBERON:0005423!7.17e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.11e-10;18!UBERON:0001986;7.11e-10;18!UBERON:0004852;7.11e-10;18!UBERON:0000487;4.58e-09;22!UBERON:0001950;5.08e-09;20!UBERON:0002619;1.21e-08;22!UBERON:0002780;1.49e-08;41!UBERON:0001890;1.49e-08;41!UBERON:0003528;1.01e-07;34!UBERON:0002020;1.01e-07;34!UBERON:0001893;1.01e-07;34!UBERON:0000073;1.40e-07;53!UBERON:0002616;1.40e-07;53!UBERON:0002791;1.51e-07;32!UBERON:0001869;1.70e-07;32!UBERON:0006914;1.79e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.33e-16,114;UBERON:0000025,2.86e-13,192;UBERON:0001049,3.17e-13,56;UBERON:0005068,3.17e-13,56;UBERON:0006241,3.17e-13,56;UBERON:0007135,3.17e-13,56;UBERON:0004111,7.85e-13,240;UBERON:0001016,1.92e-12,89;UBERON:0000073,1.92e-12,53;UBERON:0002616,1.92e-12,53;UBERON:0000955,7.15e-12,68;UBERON:0006238,7.15e-12,68;UBERON:0001017,1.60e-11,81;UBERON:0002780,2.56e-11,41;UBERON:0001890,2.56e-11,41;UBERON:0003080,2.56e-11,41;UBERON:0006240,2.56e-11,41;UBERON:0011216,5.26e-10,223;UBERON:0004638,6.12e-10,18;UBERON:0001986,6.12e-10,18;UBERON:0004852,6.12e-10,18;UBERON:0001893,2.16e-09,34;UBERON:0003528,2.78e-09,34;UBERON:0002020,2.78e-09,34;UBERON:0000487,4.44e-09,22;UBERON:0001950,5.02e-09,20;UBERON:0003075,1.13e-08,82;UBERON:0007284,1.13e-08,82;UBERON:0002619,1.19e-08,22;UBERON:0002791,1.69e-08,32;UBERON:0001869,2.00e-08,32;UBERON:0002346,3.73e-08,86;UBERON:0010314,4.20e-08,132;UBERON:0006914,1.69e-07,25;UBERON:0000483,2.50e-07,306;UBERON:0000119,3.10e-07,309;UBERON:0010371,4.21e-07,104 | |||
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| ||
|short_description=p4@CDC42BPA | |short_description=p4@CDC42BPA | ||
}} | }} |
Latest revision as of 02:35, 16 September 2015
Short description: | p4@CDC42BPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDC42BPA_5end |
Coexpression cluster: | NA |
Association with transcript: | -89bp_to_ENST00000334218, ENST00000366762, ENST00000366764, ENST00000366766, NM_003607, NM_014826, uc001hqr.2, uc001hqs.2, uc009xes.2, uc010pvs.1_5end |
EntrezGene: | CDC42BPA |
HGNC: | 1737 |
UniProt: | E9PEF7Q5VT25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.06e-11 | 24 |
blood vessel endothelial cell | 6.12e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.12e-10 | 18 |
endothelial cell | 1.94e-09 | 36 |
meso-epithelial cell | 5.14e-07 | 45 |