FFCP PHASE1:Hg19::chr9:134152417..134152430,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:134152417..134152430,- to FFCP PHASE1:Hg19::chr9:134152417..134152430,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=286336 | |EntrezGene=286336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25465 | |HGNC=25465 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JUQ0 | |UniProt=Q5JUQ0 | ||
|association_with_transcript=-483bp_to_ENST00000372271_5end | |||
|cluster_id=chr9:134152417..134152430,- | |||
|coexpression_cluster_id=C2938 | |||
|description=CAGE_peak_6_at_FAM78A_5end | |||
|id=chr9:134152417..134152430,- | |||
|ontology_enrichment_celltype=CL:0000037!3.14e-52!172;CL:0000566!3.14e-52!172;CL:0000988!7.77e-50!182;CL:0002032!2.74e-48!165;CL:0000837!2.74e-48!165;CL:0002087!8.19e-40!119;CL:0000738!1.02e-35!140;CL:0002031!8.88e-34!124;CL:0000763!1.04e-24!112;CL:0000049!1.04e-24!112;CL:0000542!3.60e-22!53;CL:0000051!3.60e-22!53;CL:0000838!1.02e-21!52;CL:0000084!5.33e-16!25;CL:0000827!5.33e-16!25;CL:0002194!3.00e-15!63;CL:0000576!3.00e-15!63;CL:0000040!3.00e-15!63;CL:0000559!3.00e-15!63;CL:0002009!2.42e-14!65;CL:0000791!3.44e-14!18;CL:0000789!3.44e-14!18;CL:0002420!3.44e-14!18;CL:0002419!3.44e-14!18;CL:0000790!3.44e-14!18;CL:0000766!7.05e-14!76;CL:0000839!7.50e-14!70;CL:0000557!7.83e-13!71;CL:0000134!3.39e-09!358;CL:0002057!3.86e-09!42;CL:0002320!2.07e-08!365;CL:0000860!5.62e-08!45;CL:0000625!9.31e-08!11;CL:0002393!1.76e-07!9;CL:0002397!1.76e-07!9;CL:0000624!2.02e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.53e-24;18!CL:0000789;1.53e-24;18!CL:0002419;1.53e-24;18!CL:0000084;2.79e-18;25!CL:0000625;4.46e-13;11!CL:0000624;6.05e-12;6!CL:0002393;2.45e-09;6!CL:0002397;2.45e-09;6!CL:0000542;3.98e-08;53!CL:0002087;1.24e-07;104!CL:0000763;1.90e-07;100!CL:0000623;4.24e-07;3!CL:0000988;7.57e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.73e-38,168;CL:0000988,1.85e-35,177;CL:0002032,2.58e-35,161;CL:0000837,2.58e-35,161;CL:0002087,2.83e-27,115;CL:0000738,1.92e-26,136;CL:0000791,7.07e-25,18;CL:0000789,7.07e-25,18;CL:0002420,7.07e-25,18;CL:0002419,7.07e-25,18;CL:0000790,7.07e-25,18;CL:0002031,1.41e-21,120;CL:0000763,2.78e-19,108;CL:0000049,2.78e-19,108;CL:0000084,2.09e-18,25;CL:0000827,2.09e-18,25;CL:0000838,1.15e-15,52;CL:0000542,3.15e-15,53;CL:0000051,3.15e-15,53;CL:0000625,2.24e-13,11;CL:0000624,5.86e-12,6;CL:0000766,1.82e-10,72;CL:0000134,2.07e-10,354;CL:0002320,7.65e-10,361;CL:0002194,9.65e-10,59;CL:0000576,9.65e-10,59;CL:0000040,9.65e-10,59;CL:0000559,9.65e-10,59;CL:0002009,3.13e-09,61;CL:0000557,1.06e-08,67;CL:0000839,4.27e-08,66;CL:0000219,7.01e-08,386;CL:0000623,3.92e-07,3;CL:0000825,3.92e-07,3;CL:0000473,8.63e-07,48;CL:0000234,8.63e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000790;1.53e-24;18!CL:0000051;3.98e-08;53!CL:0000049;3.39e-07;108 | |||
|ontology_enrichment_disease=DOID:1240!7.42e-17!39;DOID:2531!1.73e-16!51;DOID:0060083!1.73e-16!51;DOID:8692!2.60e-15!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.20e-11;31!DOID:1240;5.95e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.26e-12,31;DOID:1240,2.36e-11,39;DOID:2531,2.14e-08,51;DOID:0060083,2.14e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.39e-20!102;UBERON:0003061!9.39e-20!102;UBERON:0002193!9.25e-18!112;UBERON:0002371!1.63e-10!80;UBERON:0000178!4.88e-09!15;UBERON:0000179!4.88e-09!15;UBERON:0000463!4.88e-09!15;UBERON:0001474!7.13e-09!86;UBERON:0002405!1.13e-08!115;UBERON:0007023!2.35e-08!115;UBERON:0002384!1.14e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.17e-08;15!UBERON:0000179;1.17e-08;15!UBERON:0000463;1.17e-08;15!UBERON:0002390;6.64e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.08e-16,98;UBERON:0003061,2.08e-16,98;UBERON:0002193,8.25e-15,108;UBERON:0002405,2.52e-09,93;UBERON:0002384,4.48e-09,371;UBERON:0000178,1.14e-08,15;UBERON:0000179,1.14e-08,15;UBERON:0000463,1.14e-08,15;UBERON:0004177,5.76e-08,7;UBERON:0005057,5.76e-08,7;UBERON:0003081,9.42e-08,203;UBERON:0002370,3.35e-07,4;UBERON:0005058,3.35e-07,4;UBERON:0009113,3.35e-07,4;UBERON:0003295,3.35e-07,4;UBERON:0005562,3.35e-07,4;UBERON:0002371,5.54e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.903106483949403,0.393553906568396,1.57345710739562,1.91914699048606,2.47705797305722,0,0,0,0.154934401160603,0.426507697462265,0.587200878669695,2.76997704265939,1.60435557976113,2.17010870715852,2.46307021663917,2.59114932815184,1.80302897343931,2.03557534291391,3.02300754951048,1.94067248950253,0.232429036905685,0.411167888021826,0.309706370895104,0.575384784644301,1.0246428261164,0.236482229888585,0,0,1.35426486594342,0.188242339542605,0.818718450173537,0,0,0,0,0,0.398927315243264,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0.65156653411535,0,0,0,1.26753171787165,1.70083439972035,1.46761051855863,2.13424399178341,1.95229960693958,1.92870704036496,0.855038231223746,0.59675003159727,0.91332076882317,0,2.18455444504853,0,0.853460445133014,0.800791974072025,0.574752439954483,0.661044872784862,0,0,1.17447437874188,1.91136614062614,0,0.560508562981536,0.263384084775077,3.73748563216283,4.71612915298998,5.96244347098577,4.17966238476695,4.56291173287027,4.73447805734733,3.89653456815823,2.00538822393312,3.24066498222321,3.54454231333794,3.79125409271022,6.66074862573511,4.1618991219161,5.09757504271396,5.25065033793112,4.05724320029073,5.48660283699624,4.54819407752512,7.31748666634838,3.62589896632212,3.06576394881537,3.09264700934367,2.78321661221453,1.91139248594458,3.90650072313851,0,3.46322773878877,2.68771883424279,0,3.55165878066025,7.39015197228942,4.63695509416885,4.81392352410313,7.38604459802275,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.649094787309367,0.522389211897802,1.59549552622638,4.5313218618015,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,1.7859945656816,1.12264686313085,0.788280363383256,0,0.949265659568129,0.549605231791222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,2.70838706696137,0.936017060556951,2.0808362720422,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,2.43247561282381,3.01354254859276,0,0,0,0,0,0,0,2.35378802386407,5.12279976525011,4.74380664690938,5.90377966886842,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,2.15714200818617,5.65656056358255,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.431831832204279,4.62681758070868,0,0,0.254876273045038,0,0,0.438519753291869,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,2.27858874869665,2.85878130549347,3.29089818468955,0,1.62009431171434,3.17250070517708,0,0,0,0.557409525377156,0,0.213425530045242,0,1.39705560002972,0.766021480529467,0.635020748171649,1.62310970137278,0.842391534340376,1.36940807419915,1.88015874927628,2.50634477090067,1.18504244461122,2.56940920165919,2.01799707191048,0.851692475380653,0.687010689511529,0.921722292925374,0.671028323677248,1.83534055883099,1.75849285861836,0,0,1.89318974933188,1.99843180798692,0,0,0.439524537815682,0,0.66866030566487,0,0,0,0,0,0,0,0.988823245360557,0,0.398495976502139,0.276283915531148,0,0,0.861593638227486,0,0,0,2.55786185113436,0.197286811273867,7.18449277040819,0,0,0.0927680981618513,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0.69169171316418,1.6156375993759,0.651884231532048,0.638002319463839,1.09917112082235,1.06606955203727,1.02193298195737,1.41282230755522,0.997270091400938,1.80476528493745,1.17637520590644,1.1747511088309,0.37950746544837,0,0,0,0,0,0,0.176915129006678,0,0,0.617819694732514,0.417687798021821,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0.19871461170299,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,1.27746588066972,0,0.788662062837943,1.11712960508902,0,1.43574604915363,0.399358000997982,0.429226048136571,0.669514372325618,1.67958681216816,0,0,0,0,0,0,1.01607998478941,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,2.85878130549347,1.32418394073086,0,0,0,0,0,2.05231301873347,0,0,0,0,0.129282956361551,0,0,0,0.747511887973863,0,0.828478110694391,0.992332043623902,3.16178611036711,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0,0,0.332787154610557,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,0.853533837553127,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0.523813388962845,0,0,0.0675375846183947,0,0,0.0634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| ||
|short_description=p6@FAM78A | |||
}} | }} |
Latest revision as of 02:26, 16 September 2015
Short description: | p6@FAM78A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FAM78A_5end |
Coexpression cluster: | C2938_CD4_Peripheral_CD8_Natural_acute_chronic_Renal |
Association with transcript: | -483bp_to_ENST00000372271_5end |
EntrezGene: | FAM78A |
HGNC: | 25465 |
UniProt: | Q5JUQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.08e-16 | 98 |
blood island | 2.08e-16 | 98 |
hemolymphoid system | 8.25e-15 | 108 |
immune system | 2.52e-09 | 93 |
connective tissue | 4.48e-09 | 371 |
blood | 1.14e-08 | 15 |
haemolymphatic fluid | 1.14e-08 | 15 |
organism substance | 1.14e-08 | 15 |
hemopoietic organ | 5.76e-08 | 7 |
immune organ | 5.76e-08 | 7 |
lateral plate mesoderm | 9.42e-08 | 203 |
thymus | 3.35e-07 | 4 |
hemolymphoid system gland | 3.35e-07 | 4 |
thymic region | 3.35e-07 | 4 |
pharyngeal gland | 3.35e-07 | 4 |
thymus primordium | 3.35e-07 | 4 |
bone marrow | 5.54e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.26e-12 | 31 |
leukemia | 2.36e-11 | 39 |
hematologic cancer | 2.14e-08 | 51 |
immune system cancer | 2.14e-08 | 51 |