FFCP PHASE1:Hg19::chr12:95612024..95612042,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:95612024..95612042,+ to FFCP PHASE1:Hg19::chr12:95612024..95612042,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55591 | |EntrezGene=55591 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18258 | |HGNC=18258 | ||
|TSSclassifier=strong | |||
|UniProt=F8W0S0 | |UniProt=F8W0S0 | ||
|association_with_transcript=0bp_to_ENST00000546365,ENST00000546445,ENST00000551902_5end | |||
|cluster_id=chr12:95612024..95612042,+ | |||
|description=CAGE_peak_3_at_VEZT_5end | |||
|id=chr12:95612024..95612042,+ | |||
|ontology_enrichment_celltype=CL:0002321!5.29e-17!248;CL:0000220!1.66e-16!246;CL:0000066!1.12e-15!254;CL:0000076!1.70e-12!62;CL:0000222!7.65e-12!119;CL:0002139!6.80e-10!24;CL:0000213!2.32e-09!57;CL:0000215!2.32e-09!57;CL:0002076!9.70e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.34e-11;24!CL:0000213;2.26e-07;58!CL:0000215;2.26e-07;58!CL:0000071;6.10e-07;18!CL:0000077;9.86e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.30e-16,250;CL:0000222,2.61e-14,121;CL:0000076,7.48e-14,63;CL:0000066,1.09e-13,253;CL:0000213,1.12e-12,58;CL:0000215,1.12e-12,58;CL:0002139,5.82e-12,24;CL:0002078,7.72e-09,45;CL:0000115,2.00e-07,36;CL:0000071,2.21e-07,18;CL:0002546,2.21e-07,18;CL:0000077,6.04e-07,19 | |||
|ontology_enrichment_development_v019=CL:0002546;6.10e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.71e-12!659;UBERON:0000119!1.02e-11!312;UBERON:0000483!1.88e-11!309;UBERON:0000475!2.13e-10!365;UBERON:0000477!6.36e-10!286;UBERON:0000467!9.56e-10!625;UBERON:0004111!1.14e-09!241;UBERON:0000480!1.62e-09!626;UBERON:0000922!5.48e-09!612;UBERON:0000481!1.33e-08!347;UBERON:0002049!3.92e-08!79;UBERON:0007798!3.92e-08!79;UBERON:0002050!1.07e-07!605;UBERON:0005423!1.07e-07!605;UBERON:0005153!1.79e-07!37;UBERON:0000923!1.86e-07!604;UBERON:0005291!1.86e-07!604;UBERON:0006598!1.86e-07!604;UBERON:0002532!1.86e-07!604;UBERON:0000490!2.11e-07!138;UBERON:0000161!2.91e-07!35;UBERON:0003102!4.50e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.10e-07;18!UBERON:0001986;6.10e-07;18!UBERON:0004852;6.10e-07;18!UBERON:0003937;9.15e-07;12!UBERON:0005399;9.15e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.82e-10,99;UBERON:0002049,1.12e-08,78;UBERON:0007798,1.12e-08,78;UBERON:0000161,5.07e-08,36;UBERON:0000055,8.23e-08,68;UBERON:0000490,1.14e-07,148;UBERON:0004638,2.21e-07,18;UBERON:0001986,2.21e-07,18;UBERON:0004852,2.21e-07,18;UBERON:0000119,3.11e-07,309;UBERON:0003937,3.87e-07,12;UBERON:0005399,3.87e-07,12;UBERON:0000483,4.51e-07,306 | |||
|phase1_expression=0.181678379270557,1.2846031433459,0.140954404095971,3.00219895059391,0.893922188854576,0,0,0.631719873426831,0.783556884599516,0.491467873003018,0,0,0.263766978228454,5.69325223616215,0.994192127183747,3.36162573225888,3.61616716814386,1.46062018077475,1.46379839637152,0.123121058076788,0,0,0.85870796139317,0.821246550437305,0.753255837568817,0.152826811495903,0.246301768349837,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,1.84877005083394,0.387336002901508,0.284338464974843,0,0,0,0,0,0.32389366601898,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.449446968890169,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0.622822248995575,0,0,0,0,0,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0.196709770113833,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0.541607727530031,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0.821127996921047,0.201606743224732,0,0,0,2.01210257911091,1.79007586580942,1.0843174571537,0,0.724232594804119,0,0.486634870302636,1.13441780596881,0.886917589850256,0.702678285545008,0.916853528483988,0.728590576585084,0,0,0.348259474598534,0,0,0,0,2.78267370313387,2.58070378531837,2.77712401286075,1.69592382577203,2.09749718104953,2.47606237746061,1.25396979922086,4.65150166504792,6.75955899104749,6.6944122552934,2.81980521976403,2.28081631715554,2.4406205754817,1.83831540172934,0.81014194788176,4.01848777278359,4.4905874525234,2.47745257063309,0,0.949265659568129,1.83201743930407,0,0,0.436094052142534,0.993943903390637,1.51956613997496,1.72131935057184,4.01571269048339,0,1.12135520028461,0,0.98667019366864,1.24484414159907,2.55950276932407,1.14423332179421,1.81628913173918,5.76175924479999,0,1.24864030732128,0,1.34503812496621,2.46612447151906,2.5899671098901,1.12360645361799,2.65400422631361,1.84251475967652,1.13658359293342,0,0.494533858557114,0.910161361938026,0,2.02003336744879,1.50142223846357,1.6623846929051,0,0.612975591598039,0.45071417671979,1.70148274740032,0.89694817844431,1.2813443329114,1.48352330811693,0.300091096084402,1.54578793857658,1.03056216018252,1.11670113798954,1.5189869901714,1.55899208257918,1.7670364197088,1.47279837827679,4.52608959092673,1.42003837006646,1.10827308050404,0.508681776931463,5.60456474173561,6.2731607735892,4.58887352622406,1.95157929807353,1.45782745153634,2.09149097165133,1.86589899027667,2.77552935963191,0.36497735907583,0,1.92972281457866,0,2.78620756819187,1.44375896333917,0.118306800039844,0.337169380156203,0,0.330881918197182,0.217879444092406,0.237270619111097,0.674156540800822,0.196221465125346,0,2.21446636387394,0,0,0,0,0,0,0,0.614942192715568,0.686271241194102,6.14601598288303,1.1240175325762,4.92591964816991,9.35143296101149,0,0,1.44331342025273,0.811512834825538,1.29149563659404,2.88732895522148,3.70388410061289,6.08813287150714,0,0,0,0.468008530278475,0.148631162288728,3.74935335947108,7.8951600253464,5.38745369521069,6.26909658919938,4.06887513919547,3.83382679165211,4.92663237895944,0.176096868026452,0.414656231081544,0.144119953416961,0.37872730027914,0.253991577168676,0.763976851116555,0,0,0.719792448923265,0.901029173531752,1.42913216315289,0.448524337381443,1.30788020649984,1.3200891447771,1.55126058909333,0,0,0.797814349754612,0,0.257207374262142,0,0,1.57275793023962,0.542621605391443,0.823240336780769,0.325736184293735,2.13235169245527,0.791951872933429,2.1100756394171,2.61460037580088,2.39935178836937,0,0,2.10833939483032,0.479249710983165,0,1.42636905040718,1.73737568001095,0.410952645100767,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.502548796003046,0.637938751653163,0,0,0,2.33113834266366,5.50187573165645,2.17012018959788,2.28767947683888,3.39015078714607,2.52323864054295,3.5142424497814,0,0,2.0694614258501,1.32845119707087,0.184369168541703,2.43274120510632,0.587403472388222,0.343143423810856,0.206768026122887,0.215714200818617,0,0.303127571446259,0,0.604780586659361,0,0.153461973288062,0.280660094433074,0.384417447767103,2.04682899626681,0.321707842287215,0,0.771048469013278,0.177561725313127,0.98552587216571,1.55776328755086,0.813472649219715,0.483437798366489,5.61418116849198,3.03867263488458,2.52591785962135,1.45672934405374,4.327105693661,0.451199612907412,6.62331899097967,0,0,5.48868470242954,0,1.36074964221213,1.0795795805107,0,0.270946437543853,0.501689773854853,0,1.66215201785745,1.56712328305525,0,0.261435451024901,1.53870075069834,0,0,1.13345112812495,0.366277859273374,0.082509499920588,2.87132768998086,1.95018073810956,0,0.773365746336976,0.308097234229289,0.614014698904518,0.964856007391714,2.47066563197029,1.88521702088497,0.767039646744908,1.51354460599453,5.45440220691228,5.57351195358808,9.69856614958839,2.52894452138875,1.85938219718914,1.5740617341532,1.3940745403212,0.308033580176089,0,0.869932992075073,1.11194531462352,0.143124886741991,2.60510858551767,1.58189712359363,2.09693213316207,0,0.855877976067841,0,0.78494864019923,1.7987245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| ||
|short_description=p3@VEZT | |||
}} | }} |
Latest revision as of 02:20, 16 September 2015
Short description: | p3@VEZT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VEZT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000546365, ENST00000546445, ENST00000551902_5end |
EntrezGene: | VEZT |
HGNC: | 18258 |
UniProt: | F8W0S0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.30e-16 | 250 |
mesodermal cell | 2.61e-14 | 121 |
squamous epithelial cell | 7.48e-14 | 63 |
epithelial cell | 1.09e-13 | 253 |
lining cell | 1.12e-12 | 58 |
barrier cell | 1.12e-12 | 58 |
endothelial cell of vascular tree | 5.82e-12 | 24 |
meso-epithelial cell | 7.72e-09 | 45 |
endothelial cell | 2.00e-07 | 36 |
blood vessel endothelial cell | 2.21e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.21e-07 | 18 |
mesothelial cell | 6.04e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.82e-10 | 99 |
vasculature | 1.12e-08 | 78 |
vascular system | 1.12e-08 | 78 |
orifice | 5.07e-08 | 36 |
vessel | 8.23e-08 | 68 |
unilaminar epithelium | 1.14e-07 | 148 |
blood vessel endothelium | 2.21e-07 | 18 |
endothelium | 2.21e-07 | 18 |
cardiovascular system endothelium | 2.21e-07 | 18 |
cell layer | 3.11e-07 | 309 |
sex gland | 3.87e-07 | 12 |
male reproductive gland | 3.87e-07 | 12 |
epithelium | 4.51e-07 | 306 |