FFCP PHASE1:Hg19::chrX:56258929..56258941,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11279 | |EntrezGene=11279 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6351 | |HGNC=6351 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_ENST00000462627_5end | |association_with_transcript=22bp_to_ENST00000462627_5end | ||
|cluster_id=chrX:56258929..56258941,+ | |||
|coexpression_cluster_id=C2960 | |coexpression_cluster_id=C2960 | ||
|description=CAGE_peak_7_at_KLF8_5end | |description=CAGE_peak_7_at_KLF8_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000990!1.08e-09!8;CL:0000236!1.31e-09!14;CL:0000453!3.70e-08!5;CL:0000945!1.36e-07!24;CL:0000826!1.36e-07!24;CL:0000451!1.46e-07!10 | |ontology_enrichment_celltype=CL:0000990!1.08e-09!8;CL:0000236!1.31e-09!14;CL:0000453!3.70e-08!5;CL:0000945!1.36e-07!24;CL:0000826!1.36e-07!24;CL:0000451!1.46e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.49e-29;13!CL:0002541;1.47e-24;3!CL:0000945;1.10e-15;24!CL:0002623;1.04e-11;3!CL:0000349;1.88e-10;19!CL:0000453;1.85e-07;5!CL:0002537;2.01e-07;5!CL:0000622;2.28e-07;5 | |ontology_enrichment_celltype_v019=CL:0000236;1.49e-29;13!CL:0002541;1.47e-24;3!CL:0000945;1.10e-15;24!CL:0002623;1.04e-11;3!CL:0000349;1.88e-10;19!CL:0000453;1.85e-07;5!CL:0002537;2.01e-07;5!CL:0000622;2.28e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.03e-27,14;CL:0002541,3.18e-24,3;CL:0000945,7.27e-16,24;CL:0000826,7.27e-16,24;CL:0002623,1.22e-11,3;CL:0000349,2.11e-10,19;CL:0002537,1.77e-07,5;CL:0000453,1.83e-07,5;CL:0000622,2.51e-07,5;CL:0000838,6.77e-07,52;CL:0000542,9.46e-07,53;CL:0000051,9.46e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0009143;9.83e-10;1 | |ontology_enrichment_development_v019=UBERON:0009143;9.83e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.33e-09!115;UBERON:0005631!1.83e-08!14;UBERON:0000158!1.83e-08!14 | |ontology_enrichment_uberon=UBERON:0007023!2.33e-09!115;UBERON:0005631!1.83e-08!14;UBERON:0000158!1.83e-08!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.47e-24;3!UBERON:0000920;1.47e-24;3!UBERON:0005631;5.65e-20;10!UBERON:0000158;5.65e-20;10!UBERON:0002372;3.12e-09;1!UBERON:0007029;3.12e-09;1!UBERON:0001961;3.12e-09;1!UBERON:0001744;3.12e-09;1!UBERON:0001042;3.12e-09;1!UBERON:0001735;3.12e-09;1!UBERON:0000478;3.10e-08;24 | |ontology_enrichment_uberon_v019=UBERON:0003124;1.47e-24;3!UBERON:0000920;1.47e-24;3!UBERON:0005631;5.65e-20;10!UBERON:0000158;5.65e-20;10!UBERON:0002372;3.12e-09;1!UBERON:0007029;3.12e-09;1!UBERON:0001961;3.12e-09;1!UBERON:0001744;3.12e-09;1!UBERON:0001042;3.12e-09;1!UBERON:0001735;3.12e-09;1!UBERON:0000478;3.10e-08;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.18e-24,3;UBERON:0005631,3.60e-14,14;UBERON:0000158,3.60e-14,14;UBERON:0003124,1.01e-10,7;UBERON:0002372,1.84e-09,1;UBERON:0001961,1.84e-09,1;UBERON:0001744,1.84e-09,1;UBERON:0001735,1.84e-09,1;UBERON:0007029,4.15e-09,1;UBERON:0000478,3.38e-08,24 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.305653622991805,0.328402357799783,0.314843125254717,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,1.63841583378639,1.77901850772711,1.70692089026603,0.800791974072025,2.87376219977242,3.30522436392431,1.90810750907073,0.569212969109448,3.52342313622563,0.382273228125229,0,0,0,0.196709770113833,0,0.205601498999509,1.83905144929746,0,0,0,0.445641827540694,0,0.443067789167242,0.270803863765016,0,0,0,0,0.289803085735052,0,0,0,0.453237370790265,0,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.649094787309367,0.870648686496336,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0.818238361772504,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0.503946384596579,0.283550194484773,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0.192190067365106,0.638063562472921,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0.334330152832435,0,3.10367830158997,0.593929361665277,1.84296421259539,0,0.281338832821026,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.153900517007594,0,0.922255617552241,0.0897576444097721,0.108647371922008,2.23300811812344,1.37396390102793,1.06606955203727,0,0,0.166211681900156,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,3.29762656060626,0.353024506766001,0,0,0,0.189932387867636,0,0.0801588202515337,0,0,0,0,0,0,0.248505071130865,0.707082103850386,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0.674921674654501,12.3808312729272,0.242998226632099,0,0.315222829196793,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,1.57204305099666,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.974301544196942,0.930053882193542,1.63565394255844,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0.366857197043358,0.115525666150338,0,0,0,0.0752103283492573,0,0,0.785720083444267,0,0,0,0,0,0.19024743058172,0,0,0.992422356778588,0,0,0,0,0,0,0.0887023701626388,0,0,0.203909198930495,0.263091094251396,0,0,0.078493092850514,0.628462359664008,0,0.913158720509496,0,0,0.0714765441766563,0,0.116241425368125,0,0,0.207216164163037,1.53646629384555,2.07377898544228,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0.917458566809082,0,0,0.271965960763659,0,0,0,0,0,0,0,0.126698501011437,0,0.26721740526556,0.643264296743914,0,0.0757786982182394,0.267964130156178,0,0,1.49263787330687,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0,0.435433495793923,0.684466602170562,1.88585748440845,0.143444410785353,0.332660356546013,0,0,0,0,0,0.366724332548599,0.406896178315738,0,1.00636896795513,0 | |phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.305653622991805,0.328402357799783,0.314843125254717,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,1.63841583378639,1.77901850772711,1.70692089026603,0.800791974072025,2.87376219977242,3.30522436392431,1.90810750907073,0.569212969109448,3.52342313622563,0.382273228125229,0,0,0,0.196709770113833,0,0.205601498999509,1.83905144929746,0,0,0,0.445641827540694,0,0.443067789167242,0.270803863765016,0,0,0,0,0.289803085735052,0,0,0,0.453237370790265,0,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.649094787309367,0.870648686496336,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0.818238361772504,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0.503946384596579,0.283550194484773,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0.192190067365106,0.638063562472921,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0.334330152832435,0,3.10367830158997,0.593929361665277,1.84296421259539,0,0.281338832821026,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.153900517007594,0,0.922255617552241,0.0897576444097721,0.108647371922008,2.23300811812344,1.37396390102793,1.06606955203727,0,0,0.166211681900156,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,3.29762656060626,0.353024506766001,0,0,0,0.189932387867636,0,0.0801588202515337,0,0,0,0,0,0,0.248505071130865,0.707082103850386,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0.674921674654501,12.3808312729272,0.242998226632099,0,0.315222829196793,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,1.57204305099666,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.974301544196942,0.930053882193542,1.63565394255844,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0.366857197043358,0.115525666150338,0,0,0,0.0752103283492573,0,0,0.785720083444267,0,0,0,0,0,0.19024743058172,0,0,0.992422356778588,0,0,0,0,0,0,0.0887023701626388,0,0,0.203909198930495,0.263091094251396,0,0,0.078493092850514,0.628462359664008,0,0.913158720509496,0,0,0.0714765441766563,0,0.116241425368125,0,0,0.207216164163037,1.53646629384555,2.07377898544228,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0.917458566809082,0,0,0.271965960763659,0,0,0,0,0,0,0,0.126698501011437,0,0.26721740526556,0.643264296743914,0,0.0757786982182394,0.267964130156178,0,0,1.49263787330687,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0,0.435433495793923,0.684466602170562,1.88585748440845,0.143444410785353,0.332660356546013,0,0,0,0,0,0.366724332548599,0.406896178315738,0,1.00636896795513,0 | ||
|short_description=p7@KLF8 | |short_description=p7@KLF8 | ||
}} | }} |
Latest revision as of 02:14, 16 September 2015
Short description: | p7@KLF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_KLF8_5end |
Coexpression cluster: | C2960_immature_chorionic_migratory_lung_CD19_Small_amniotic |
Association with transcript: | 22bp_to_ENST00000462627_5end |
EntrezGene: | KLF8 |
HGNC: | 6351 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.03e-27 | 14 |
chorionic membrane mesenchymal stem cell | 3.18e-24 | 3 |
lymphocyte of B lineage | 7.27e-16 | 24 |
pro-B cell | 7.27e-16 | 24 |
acinar cell of salivary gland | 1.22e-11 | 3 |
extraembryonic cell | 2.11e-10 | 19 |
amnion mesenchymal stem cell | 1.77e-07 | 5 |
Langerhans cell | 1.83e-07 | 5 |
acinar cell | 2.51e-07 | 5 |
lymphoid lineage restricted progenitor cell | 6.77e-07 | 52 |
lymphocyte | 9.46e-07 | 53 |
common lymphoid progenitor | 9.46e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.18e-24 | 3 |
extraembryonic membrane | 3.60e-14 | 14 |
membranous layer | 3.60e-14 | 14 |
chorion | 1.01e-10 | 7 |
tonsil | 1.84e-09 | 1 |
mucosa-associated lymphoid tissue | 1.84e-09 | 1 |
lymphoid tissue | 1.84e-09 | 1 |
tonsillar ring | 1.84e-09 | 1 |
surface | 4.15e-09 | 1 |
extraembryonic structure | 3.38e-08 | 24 |