FFCP PHASE1:Hg19::chr16:28943267..28943316,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=930 | |EntrezGene=930 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1633 | |HGNC=1633 | ||
|TSSclassifier=strong | |||
|UniProt=P15391 | |UniProt=P15391 | ||
|association_with_transcript=0bp_to_ENST00000324662_5end | |association_with_transcript=0bp_to_ENST00000324662_5end | ||
|cluster_id=chr16:28943267..28943316,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_CD19_5end | |description=CAGE_peak_1_at_CD19_5end | ||
|id=chr16:28943267..28943316,+ | |id=chr16:28943267..28943316,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.17e-40!24;CL:0000826!2.17e-40!24;CL:0000236!6.19e-27!14;CL:0000542!5.94e-23!53;CL:0000051!5.94e-23!53;CL:0000838!1.14e-21!52;CL:0002087!3.98e-21!119;CL:0000738!8.26e-17!140;CL:0002031!2.26e-15!124;CL:0000037!1.16e-12!172;CL:0000566!1.16e-12!172;CL:0000988!1.26e-12!182;CL:0002032!1.11e-10!165;CL:0000837!1.11e-10!165;CL:0000817!7.32e-07!3 | |ontology_enrichment_celltype=CL:0000945!2.17e-40!24;CL:0000826!2.17e-40!24;CL:0000236!6.19e-27!14;CL:0000542!5.94e-23!53;CL:0000051!5.94e-23!53;CL:0000838!1.14e-21!52;CL:0002087!3.98e-21!119;CL:0000738!8.26e-17!140;CL:0002031!2.26e-15!124;CL:0000037!1.16e-12!172;CL:0000566!1.16e-12!172;CL:0000988!1.26e-12!182;CL:0002032!1.11e-10!165;CL:0000837!1.11e-10!165;CL:0000817!7.32e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.90e-67;24!CL:0000236;2.39e-41;13!CL:0000542;1.38e-20;53!CL:0000226;2.18e-09;3!CL:0000842;2.18e-09;3!CL:0002087;6.15e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.96e-67,24;CL:0000826,1.96e-67,24;CL:0000236,2.63e-44,14;CL:0000542,4.39e-32,53;CL:0000051,4.39e-32,53;CL:0000838,4.81e-30,52;CL:0002087,4.31e-18,115;CL:0000738,4.52e-14,136;CL:0002031,3.80e-12,120;CL:0000037,1.25e-11,168;CL:0000988,1.82e-11,177;CL:0000817,1.77e-10,3;CL:0000226,2.35e-09,3;CL:0000842,2.35e-09,3;CL:0002032,6.09e-09,161;CL:0000837,6.09e-09,161;CL:0000785,1.54e-07,2;CL:0000955,1.54e-07,2;CL:0000818,1.54e-07,2;CL:0000954,1.54e-07,2;CL:0000816,1.54e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.38e-20;53!CL:0000954;1.54e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;6.28e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.28e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.01e-16!115;UBERON:0000178!1.17e-15!15;UBERON:0000179!1.17e-15!15;UBERON:0000463!1.17e-15!15;UBERON:0002193!6.27e-09!112;UBERON:0002390!6.37e-09!102;UBERON:0003061!6.37e-09!102 | |ontology_enrichment_uberon=UBERON:0007023!2.01e-16!115;UBERON:0000178!1.17e-15!15;UBERON:0000179!1.17e-15!15;UBERON:0000463!1.17e-15!15;UBERON:0002193!6.27e-09!112;UBERON:0002390!6.37e-09!102;UBERON:0003061!6.37e-09!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.01e-26;15!UBERON:0000179;4.01e-26;15!UBERON:0000463;4.01e-26;15!UBERON:0002390;1.37e-20;32!UBERON:0002193;3.12e-14;42!UBERON:0004177;8.59e-10;5!UBERON:0005057;8.59e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.30e-26,15;UBERON:0000179,4.30e-26,15;UBERON:0000463,4.30e-26,15;UBERON:0007023,7.28e-08,114;UBERON:0002193,1.66e-07,108;UBERON:0004177,5.33e-07,7;UBERON:0005057,5.33e-07,7;UBERON:0003408,7.08e-07,10;UBERON:0002390,7.45e-07,98;UBERON:0003061,7.45e-07,98 | |||
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| ||
|short_description=p1@CD19 | |short_description=p1@CD19 | ||
}} | }} |
Latest revision as of 01:44, 16 September 2015
Short description: | p1@CD19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD19_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000324662_5end |
EntrezGene: | CD19 |
HGNC: | 1633 |
UniProt: | P15391 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.96e-67 | 24 |
pro-B cell | 1.96e-67 | 24 |
B cell | 2.63e-44 | 14 |
lymphocyte | 4.39e-32 | 53 |
common lymphoid progenitor | 4.39e-32 | 53 |
lymphoid lineage restricted progenitor cell | 4.81e-30 | 52 |
nongranular leukocyte | 4.31e-18 | 115 |
leukocyte | 4.52e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 3.80e-12 | 120 |
hematopoietic stem cell | 1.25e-11 | 168 |
hematopoietic cell | 1.82e-11 | 177 |
precursor B cell | 1.77e-10 | 3 |
single nucleate cell | 2.35e-09 | 3 |
mononuclear cell | 2.35e-09 | 3 |
hematopoietic oligopotent progenitor cell | 6.09e-09 | 161 |
hematopoietic multipotent progenitor cell | 6.09e-09 | 161 |
mature B cell | 1.54e-07 | 2 |
pre-B-II cell | 1.54e-07 | 2 |
transitional stage B cell | 1.54e-07 | 2 |
small pre-B-II cell | 1.54e-07 | 2 |
immature B cell | 1.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 4.30e-26 | 15 |
haemolymphatic fluid | 4.30e-26 | 15 |
organism substance | 4.30e-26 | 15 |
adult organism | 7.28e-08 | 114 |
hemolymphoid system | 1.66e-07 | 108 |
hemopoietic organ | 5.33e-07 | 7 |
immune organ | 5.33e-07 | 7 |
gland of gut | 7.08e-07 | 10 |
hematopoietic system | 7.45e-07 | 98 |
blood island | 7.45e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.28e-08 | 10 |