FFCP PHASE1:Hg19::chr12:105724613..105724666,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:105724613..105724666,+ to FFCP PHASE1:Hg19::chr12:105724613..105724666,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=387882 | |EntrezGene=387882 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=35164 | |HGNC=35164 | ||
|TSSclassifier=strong | |||
|UniProt=F8VQD4 | |UniProt=F8VQD4 | ||
|association_with_transcript=0bp_to_ENST00000546866,ENST00000549934_5end | |||
|cluster_id=chr12:105724613..105724666,+ | |||
|coexpression_cluster_id=C3224 | |||
|description=CAGE_peak_2_at_C12orf75_5end | |||
|id=chr12:105724613..105724666,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.75e-16!180;CL:0000057!1.28e-15!75;CL:0002620!2.72e-11!23;CL:0000192!3.87e-10!42;CL:0000514!3.87e-10!42;CL:0000144!8.24e-10!625;CL:0002371!2.12e-09!591;CL:0000359!4.99e-09!32;CL:0000003!1.84e-08!722;CL:0000680!2.43e-08!57;CL:0000056!2.43e-08!57;CL:0000355!2.43e-08!57;CL:0000183!1.02e-07!59;CL:0000187!1.19e-07!54;CL:0000048!2.41e-07!430;CL:0000723!4.90e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.22e-11;23!CL:0000359;1.11e-08;32!CL:0000192;3.14e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.01e-16,76;CL:0002620,2.44e-11,23;CL:0000192,6.24e-10,43;CL:0000514,6.24e-10,43;CL:0000359,4.59e-09,32;CL:0000680,2.77e-08,58;CL:0000056,2.77e-08,58;CL:0000355,2.77e-08,58;CL:0000048,4.57e-08,427;CL:0000723,9.74e-08,433;CL:0000187,1.35e-07,55;CL:0000034,5.05e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;3.14e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.85e-13!83;UBERON:0002329!1.85e-13!83;UBERON:0003077!1.85e-13!83;UBERON:0003059!1.85e-13!83;UBERON:0007282!1.85e-13!83;UBERON:0009618!1.85e-13!83;UBERON:0007285!1.85e-13!83;UBERON:0005256!8.81e-11!143;UBERON:0004290!1.57e-10!70;UBERON:0000486!2.92e-10!82;UBERON:0003102!5.77e-09!95;UBERON:0002199!1.78e-08!45;UBERON:0002416!1.78e-08!45;UBERON:0002097!7.49e-08!40;UBERON:0001134!7.76e-08!61;UBERON:0002036!7.76e-08!61;UBERON:0003082!7.76e-08!61;UBERON:0002385!2.19e-07!63;UBERON:0001015!2.19e-07!63;UBERON:0000383!2.19e-07!63;UBERON:0004573!3.16e-07!33;UBERON:0004571!3.16e-07!33;UBERON:0001637!4.03e-07!42;UBERON:0003509!4.03e-07!42;UBERON:0004572!4.03e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.73e-07;33!UBERON:0004571;9.73e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,9.53e-11,78;UBERON:0007524,1.42e-10,73;UBERON:0002329,1.77e-10,71;UBERON:0003059,1.77e-10,71;UBERON:0007282,1.77e-10,71;UBERON:0004290,1.77e-10,71;UBERON:0009618,1.77e-10,71;UBERON:0003102,3.44e-10,99;UBERON:0003077,3.82e-10,72;UBERON:0007285,3.82e-10,72;UBERON:0000486,3.91e-10,83;UBERON:0002199,7.13e-09,46;UBERON:0002416,7.13e-09,46;UBERON:0002097,3.02e-08,41;UBERON:0001134,8.63e-08,62;UBERON:0002036,8.63e-08,62;UBERON:0003082,8.63e-08,62;UBERON:0002385,2.40e-07,64;UBERON:0001015,2.40e-07,64;UBERON:0000383,2.40e-07,64;UBERON:0004573,2.96e-07,33;UBERON:0004571,2.96e-07,33;UBERON:0003104,3.32e-07,160;UBERON:0009142,3.32e-07,160;UBERON:0001637,3.79e-07,42;UBERON:0003509,3.79e-07,42;UBERON:0004572,3.79e-07,42 | |||
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| ||
|short_description=p2@C12orf75 | |||
}} | }} |
Latest revision as of 01:33, 16 September 2015
Short description: | p2@C12orf75 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C12orf75_5end |
Coexpression cluster: | C3224_Fibroblast_Dendritic_basal_chronic_leiomyoma_Renal_Aortic |
Association with transcript: | 0bp_to_ENST00000546866, ENST00000549934_5end |
EntrezGene: | C12orf75 |
HGNC: | 35164 |
UniProt: | F8VQD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.01e-16 | 76 |
skin fibroblast | 2.44e-11 | 23 |
smooth muscle cell | 6.24e-10 | 43 |
smooth muscle myoblast | 6.24e-10 | 43 |
vascular associated smooth muscle cell | 4.59e-09 | 32 |
muscle precursor cell | 2.77e-08 | 58 |
myoblast | 2.77e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.77e-08 | 58 |
multi fate stem cell | 4.57e-08 | 427 |
somatic stem cell | 9.74e-08 | 433 |
muscle cell | 1.35e-07 | 55 |
stem cell | 5.05e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 9.53e-11 | 78 |
dense mesenchyme tissue | 1.42e-10 | 73 |
somite | 1.77e-10 | 71 |
presomitic mesoderm | 1.77e-10 | 71 |
presumptive segmental plate | 1.77e-10 | 71 |
dermomyotome | 1.77e-10 | 71 |
trunk paraxial mesoderm | 1.77e-10 | 71 |
surface structure | 3.44e-10 | 99 |
paraxial mesoderm | 3.82e-10 | 72 |
presumptive paraxial mesoderm | 3.82e-10 | 72 |
multilaminar epithelium | 3.91e-10 | 83 |
integument | 7.13e-09 | 46 |
integumental system | 7.13e-09 | 46 |
skin of body | 3.02e-08 | 41 |
skeletal muscle tissue | 8.63e-08 | 62 |
striated muscle tissue | 8.63e-08 | 62 |
myotome | 8.63e-08 | 62 |
muscle tissue | 2.40e-07 | 64 |
musculature | 2.40e-07 | 64 |
musculature of body | 2.40e-07 | 64 |
systemic artery | 2.96e-07 | 33 |
systemic arterial system | 2.96e-07 | 33 |
mesenchyme | 3.32e-07 | 160 |
entire embryonic mesenchyme | 3.32e-07 | 160 |
artery | 3.79e-07 | 42 |
arterial blood vessel | 3.79e-07 | 42 |
arterial system | 3.79e-07 | 42 |