FFCP PHASE1:Hg19::chr2:102758135..102758166,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:102758135..102758166,+ to FFCP PHASE1:Hg19::chr2:102758135..102758166,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3554 | |EntrezGene=3554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5993 | |HGNC=5993 | ||
|TSSclassifier=strong | |||
|UniProt=C9J686 | |UniProt=C9J686 | ||
|association_with_transcript=-64bp_to_ENST00000450319_5end | |||
|cluster_id=chr2:102758135..102758166,+ | |||
|description=CAGE_peak_14_at_IL1R1_5end | |||
|id=chr2:102758135..102758166,+ | |||
|ontology_enrichment_celltype=CL:0000057!3.03e-20!75;CL:0000055!6.13e-18!180;CL:0000183!1.34e-10!59;CL:0000187!2.22e-10!54;CL:0000048!8.49e-10!430;CL:0000188!8.55e-10!9;CL:0000723!1.11e-09!436;CL:0000680!1.91e-09!57;CL:0000056!1.91e-09!57;CL:0000355!1.91e-09!57;CL:0000034!4.98e-09!444;CL:0000393!1.29e-08!60;CL:0000211!1.29e-08!60;CL:0002552!4.72e-08!5;CL:0002620!2.65e-07!23;CL:0000136!4.72e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002552;7.39e-14;5!CL:0002504;1.87e-13;3!CL:1000279;1.87e-13;3!CL:1000280;1.87e-13;3!CL:0002549;8.36e-10;2!CL:0002367;1.06e-09;2!CL:0000569;1.50e-09;4!CL:0002195;6.02e-09;2!CL:0002571;6.02e-09;2!CL:0002494;6.95e-09;16!CL:0000188;6.73e-08;9!CL:0000594;4.70e-07;3!CL:0000187;8.94e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,1.04e-13,3;CL:1000279,1.04e-13,3;CL:1000280,1.04e-13,3;CL:0002552,1.14e-13,5;CL:0000187,3.25e-10,55;CL:0002549,9.54e-10,2;CL:0002367,9.54e-10,2;CL:0000569,1.46e-09,4;CL:0000011,1.46e-09,4;CL:0000680,1.53e-09,58;CL:0000056,1.53e-09,58;CL:0000355,1.53e-09,58;CL:0000057,6.02e-09,76;CL:0000393,6.15e-09,61;CL:0000211,6.15e-09,61;CL:0002195,6.29e-09,2;CL:0002571,6.29e-09,2;CL:0002494,7.13e-09,16;CL:0000048,2.95e-08,427;CL:0000723,5.12e-08,433;CL:0000188,5.63e-08,9;CL:0000034,1.04e-07,441;CL:0000594,4.71e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000011;1.50e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.74e-12!83;UBERON:0002329!3.74e-12!83;UBERON:0003077!3.74e-12!83;UBERON:0003059!3.74e-12!83;UBERON:0007282!3.74e-12!83;UBERON:0009618!3.74e-12!83;UBERON:0007285!3.74e-12!83;UBERON:0003102!1.28e-10!95;UBERON:0004290!3.46e-10!70;UBERON:0002385!2.15e-09!63;UBERON:0001015!2.15e-09!63;UBERON:0000383!2.15e-09!63;UBERON:0005256!7.52e-09!143;UBERON:0001134!2.33e-08!61;UBERON:0002036!2.33e-08!61;UBERON:0003082!2.33e-08!61;UBERON:0002200!1.11e-07!11;UBERON:0006876!1.11e-07!11;UBERON:0005284!1.33e-07!5;UBERON:0002199!1.37e-07!45;UBERON:0002416!1.37e-07!45;UBERON:0000486!1.73e-07!82;UBERON:0000475!4.24e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;8.36e-10;2!UBERON:0005358;8.36e-10;2!UBERON:0001886;8.36e-10;2!UBERON:0004086;8.36e-10;2!UBERON:0005282;8.36e-10;2!UBERON:0005281;8.36e-10;2!UBERON:0006876;9.44e-10;11!UBERON:0005969;1.06e-09;2!UBERON:0003956;1.06e-09;2!UBERON:0001828;1.11e-08;8!UBERON:0005284;1.73e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,9.54e-10,2;UBERON:0005358,9.54e-10,2;UBERON:0005969,9.54e-10,2;UBERON:0001886,9.54e-10,2;UBERON:0004086,9.54e-10,2;UBERON:0005282,9.54e-10,2;UBERON:0005281,9.54e-10,2;UBERON:0003956,9.54e-10,2;UBERON:0006876,1.00e-09,11;UBERON:0001134,9.50e-09,62;UBERON:0002036,9.50e-09,62;UBERON:0003082,9.50e-09,62;UBERON:0001828,1.44e-08,8;UBERON:0002329,1.47e-08,71;UBERON:0003059,1.47e-08,71;UBERON:0007282,1.47e-08,71;UBERON:0004290,1.47e-08,71;UBERON:0009618,1.47e-08,71;UBERON:0005284,1.99e-08,5;UBERON:0003077,2.13e-08,72;UBERON:0007285,2.13e-08,72;UBERON:0002385,2.17e-08,64;UBERON:0001015,2.17e-08,64;UBERON:0000383,2.17e-08,64;UBERON:0007524,3.05e-08,73;UBERON:0000948,1.55e-07,24;UBERON:0005498,1.55e-07,24;UBERON:0004140,1.55e-07,24;UBERON:0009881,1.55e-07,24;UBERON:0004141,1.55e-07,24;UBERON:0003084,1.55e-07,24;UBERON:0007005,1.55e-07,24;UBERON:0004139,1.55e-07,24;UBERON:0004291,1.55e-07,24;UBERON:0007503,1.59e-07,78;UBERON:0005256,5.93e-07,122;UBERON:0000486,6.74e-07,83 | |||
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| ||
|short_description=p14@IL1R1 | |||
}} | }} |
Latest revision as of 01:31, 16 September 2015
Short description: | p14@IL1R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_IL1R1_5end |
Coexpression cluster: | NA |
Association with transcript: | -64bp_to_ENST00000450319_5end |
EntrezGene: | IL1R1 |
HGNC: | 5993 |
UniProt: | C9J686 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 1.04e-13 | 3 |
smooth muscle cell of large intestine | 1.04e-13 | 3 |
smooth muscle cell of colon | 1.04e-13 | 3 |
fibroblast of gingiva | 1.14e-13 | 5 |
muscle cell | 3.25e-10 | 55 |
fibroblast of choroid plexus | 9.54e-10 | 2 |
trabecular meshwork cell | 9.54e-10 | 2 |
cardiac mesenchymal cell | 1.46e-09 | 4 |
migratory trunk neural crest cell | 1.46e-09 | 4 |
muscle precursor cell | 1.53e-09 | 58 |
myoblast | 1.53e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.53e-09 | 58 |
fibroblast | 6.02e-09 | 76 |
electrically responsive cell | 6.15e-09 | 61 |
electrically active cell | 6.15e-09 | 61 |
hepatic stem cell | 6.29e-09 | 2 |
hepatic mesenchymal stem cell | 6.29e-09 | 2 |
cardiocyte | 7.13e-09 | 16 |
multi fate stem cell | 2.95e-08 | 427 |
somatic stem cell | 5.12e-08 | 433 |
cell of skeletal muscle | 5.63e-08 | 9 |
stem cell | 1.04e-07 | 441 |
skeletal muscle satellite cell | 4.71e-07 | 3 |