FFCP PHASE1:Hg19::chr12:105629852..105629969,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55198 | |EntrezGene=55198 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18242 | |HGNC=18242 | ||
|TSSclassifier=strong | |||
|UniProt=F8W1P5,F8VWV2 | |UniProt=F8W1P5,F8VWV2 | ||
|association_with_transcript=0bp_to_ENST00000551662,ENST00000553097_5end | |association_with_transcript=0bp_to_ENST00000551662,ENST00000553097_5end | ||
|cluster_id=chr12:105629852..105629969,- | |||
|description=CAGE_peak_1_at_APPL2_5end | |description=CAGE_peak_1_at_APPL2_5end | ||
|id=chr12:105629852..105629969,- | |id=chr12:105629852..105629969,- | ||
|ontology_enrichment_celltype=CL:0000057!2.00e-14!75;CL:0002620!5.84e-13!23;CL:0000055!1.06e-08!180 | |ontology_enrichment_celltype=CL:0000057!2.00e-14!75;CL:0002620!5.84e-13!23;CL:0000055!1.06e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.98e-13;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.89e-15,76;CL:0002620,5.84e-13,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.77e-20!115;UBERON:0000475!3.76e-19!365;UBERON:0000468!9.90e-17!659;UBERON:0001049!7.14e-16!57;UBERON:0005068!7.14e-16!57;UBERON:0006241!7.14e-16!57;UBERON:0007135!7.14e-16!57;UBERON:0000062!1.24e-15!511;UBERON:0000467!1.10e-14!625;UBERON:0000480!2.12e-14!626;UBERON:0002616!3.29e-13!59;UBERON:0000955!8.92e-12!69;UBERON:0006238!8.92e-12!69;UBERON:0003080!2.27e-11!42;UBERON:0002780!7.38e-11!41;UBERON:0001890!7.38e-11!41;UBERON:0006240!7.38e-11!41;UBERON:0001017!1.14e-10!82;UBERON:0005743!1.83e-10!86;UBERON:0003075!2.33e-10!86;UBERON:0007284!2.33e-10!86;UBERON:0000481!3.36e-10!347;UBERON:0000033!4.77e-09!123;UBERON:0000025!5.48e-09!194;UBERON:0000073!7.31e-09!94;UBERON:0001016!7.31e-09!94;UBERON:0004111!9.20e-09!241;UBERON:0002020!9.33e-09!34;UBERON:0003528!9.33e-09!34;UBERON:0001893!2.01e-08!34;UBERON:0002346!2.42e-08!90;UBERON:0002791!2.87e-08!33;UBERON:0000153!5.72e-08!129;UBERON:0007811!5.72e-08!129;UBERON:0002050!8.34e-08!605;UBERON:0005423!8.34e-08!605;UBERON:0000923!1.34e-07!604;UBERON:0005291!1.34e-07!604;UBERON:0006598!1.34e-07!604;UBERON:0002532!1.34e-07!604;UBERON:0001869!1.50e-07!32;UBERON:0002199!1.73e-07!45;UBERON:0002416!1.73e-07!45;UBERON:0000477!1.87e-07!286;UBERON:0000922!2.42e-07!612;UBERON:0002097!4.96e-07!40;UBERON:0000119!9.49e-07!312;UBERON:0003056!9.83e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!4.77e-20!115;UBERON:0000475!3.76e-19!365;UBERON:0000468!9.90e-17!659;UBERON:0001049!7.14e-16!57;UBERON:0005068!7.14e-16!57;UBERON:0006241!7.14e-16!57;UBERON:0007135!7.14e-16!57;UBERON:0000062!1.24e-15!511;UBERON:0000467!1.10e-14!625;UBERON:0000480!2.12e-14!626;UBERON:0002616!3.29e-13!59;UBERON:0000955!8.92e-12!69;UBERON:0006238!8.92e-12!69;UBERON:0003080!2.27e-11!42;UBERON:0002780!7.38e-11!41;UBERON:0001890!7.38e-11!41;UBERON:0006240!7.38e-11!41;UBERON:0001017!1.14e-10!82;UBERON:0005743!1.83e-10!86;UBERON:0003075!2.33e-10!86;UBERON:0007284!2.33e-10!86;UBERON:0000481!3.36e-10!347;UBERON:0000033!4.77e-09!123;UBERON:0000025!5.48e-09!194;UBERON:0000073!7.31e-09!94;UBERON:0001016!7.31e-09!94;UBERON:0004111!9.20e-09!241;UBERON:0002020!9.33e-09!34;UBERON:0003528!9.33e-09!34;UBERON:0001893!2.01e-08!34;UBERON:0002346!2.42e-08!90;UBERON:0002791!2.87e-08!33;UBERON:0000153!5.72e-08!129;UBERON:0007811!5.72e-08!129;UBERON:0002050!8.34e-08!605;UBERON:0005423!8.34e-08!605;UBERON:0000923!1.34e-07!604;UBERON:0005291!1.34e-07!604;UBERON:0006598!1.34e-07!604;UBERON:0002532!1.34e-07!604;UBERON:0001869!1.50e-07!32;UBERON:0002199!1.73e-07!45;UBERON:0002416!1.73e-07!45;UBERON:0000477!1.87e-07!286;UBERON:0000922!2.42e-07!612;UBERON:0002097!4.96e-07!40;UBERON:0000119!9.49e-07!312;UBERON:0003056!9.83e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.86e-08;53!UBERON:0002616;1.86e-08;53!UBERON:0002780;2.28e-08;41!UBERON:0001890;2.28e-08;41!UBERON:0003528;1.98e-07;34!UBERON:0002020;1.98e-07;34!UBERON:0002791;3.44e-07;32!UBERON:0001893;4.18e-07;34!UBERON:0001869;6.38e-07;32 | |||
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| ||
|short_description=p1@APPL2 | |short_description=p1@APPL2 | ||
}} | }} |
Latest revision as of 01:22, 16 September 2015
Short description: | p1@APPL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APPL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000551662, ENST00000553097_5end |
EntrezGene: | APPL2 |
HGNC: | 18242 |
UniProt: | F8W1P5F8VWV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.89e-15 | 76 |
skin fibroblast | 5.84e-13 | 23 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.03e-19 | 114 |
neural tube | 2.43e-15 | 56 |
neural rod | 2.43e-15 | 56 |
future spinal cord | 2.43e-15 | 56 |
neural keel | 2.43e-15 | 56 |
regional part of nervous system | 7.57e-14 | 53 |
regional part of brain | 7.57e-14 | 53 |
structure with developmental contribution from neural crest | 1.17e-12 | 132 |
brain | 2.54e-11 | 68 |
future brain | 2.54e-11 | 68 |
neural plate | 2.71e-11 | 82 |
presumptive neural plate | 2.71e-11 | 82 |
regional part of forebrain | 7.37e-11 | 41 |
forebrain | 7.37e-11 | 41 |
anterior neural tube | 7.37e-11 | 41 |
future forebrain | 7.37e-11 | 41 |
central nervous system | 2.98e-10 | 81 |
neurectoderm | 4.22e-09 | 86 |
brain grey matter | 9.33e-09 | 34 |
gray matter | 9.33e-09 | 34 |
nervous system | 1.28e-08 | 89 |
anatomical conduit | 1.31e-08 | 240 |
tube | 1.38e-08 | 192 |
telencephalon | 2.01e-08 | 34 |
regional part of telencephalon | 8.02e-08 | 32 |
integument | 9.07e-08 | 46 |
integumental system | 9.07e-08 | 46 |
cerebral hemisphere | 1.50e-07 | 32 |
ecto-epithelium | 2.00e-07 | 104 |
skin of body | 2.59e-07 | 41 |
cell layer | 3.26e-07 | 309 |
epithelium | 3.53e-07 | 306 |
pre-chordal neural plate | 9.31e-07 | 61 |