FFCP PHASE1:Hg19::chr3:150481170..150481179,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6478 | |EntrezGene=6478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10858 | |HGNC=10858 | ||
|TSSclassifier=strong | |||
|UniProt=O43255 | |UniProt=O43255 | ||
|association_with_transcript=-6bp_to_ENST00000312960_5end | |association_with_transcript=-6bp_to_ENST00000312960_5end | ||
|cluster_id=chr3:150481170..150481179,- | |||
|description=CAGE_peak_12_at_SIAH2_5end | |description=CAGE_peak_12_at_SIAH2_5end | ||
|id=chr3:150481170..150481179,- | |id=chr3:150481170..150481179,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.12e-15;2!CL:0000558;1.12e-15;2!CL:0000182;9.55e-15;12!CL:0002032;2.05e-08;1!CL:0000557;2.05e-08;1 | |ontology_enrichment_celltype_v019=CL:0000764;1.12e-15;2!CL:0000558;1.12e-15;2!CL:0000182;9.55e-15;12!CL:0002032;2.05e-08;1!CL:0000557;2.05e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,9.32e-16,2;CL:0000765,9.32e-16,2;CL:0000050,9.32e-16,2;CL:0000038,9.32e-16,2;CL:0000558,9.32e-16,2;CL:0000547,9.32e-16,2;CL:0000549,9.32e-16,2;CL:0000550,9.32e-16,2;CL:0000552,9.32e-16,2;CL:0000182,9.05e-15,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.24e-16;11!UBERON:0009497;1.34e-13;13!UBERON:0003104;7.72e-08;31 | |ontology_enrichment_development_v019=UBERON:0004161;4.24e-16;11!UBERON:0009497;1.34e-13;13!UBERON:0003104;7.72e-08;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.96e-13;19!UBERON:0006925;4.96e-13;19!UBERON:0002423;8.75e-10;25!UBERON:0000178;7.92e-08;15!UBERON:0000179;7.92e-08;15!UBERON:0000463;7.92e-08;15!UBERON:0002390;1.34e-07;32!UBERON:0002368;3.76e-07;33!UBERON:0002365;3.86e-07;31!UBERON:0002330;3.86e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0002107;4.96e-13;19!UBERON:0006925;4.96e-13;19!UBERON:0002423;8.75e-10;25!UBERON:0000178;7.92e-08;15!UBERON:0000179;7.92e-08;15!UBERON:0000463;7.92e-08;15!UBERON:0002390;1.34e-07;32!UBERON:0002368;3.76e-07;33!UBERON:0002365;3.86e-07;31!UBERON:0002330;3.86e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.82e-13,19;UBERON:0006925,4.82e-13,19;UBERON:0008836,4.82e-13,19;UBERON:0008835,3.38e-11,22;UBERON:0003894,3.38e-11,22;UBERON:0009854,1.09e-10,23;UBERON:0007499,8.56e-10,25;UBERON:0009497,8.56e-10,25;UBERON:0000015,8.56e-10,25;UBERON:0002423,8.56e-10,25;UBERON:0006235,8.56e-10,25;UBERON:0004161,8.56e-10,25;UBERON:0009856,2.13e-09,26;UBERON:0000178,7.58e-08,15;UBERON:0000179,7.58e-08,15;UBERON:0000463,7.58e-08,15;UBERON:0002365,8.48e-08,31;UBERON:0002330,8.48e-08,31;UBERON:0002368,7.57e-07,35 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0.436882744260345,0.791300934685361,0.123766352960047,0,0,0,0,0,0,0,0.626909442956176,0,0.136874425072884,0,0.229240217243854,0.328402357799783,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0,0.651032612147555,0,0,0.257575567634187,0,0,0,0.232429036905685,0.822335776043652,0,0.863077176966451,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0.188242339542605,0.545812300115692,0.224723484445085,0,0.320929027076094,0,0,0,0.426224750532694,3.48251086354301,0,0.622822248995575,0.251248665256743,0,0,2.42159801053347,1.10483290796269,2.84816148696796,0.422510572623884,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.474541238222193,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0.245976877086227,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.977208552881205,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0.224170287987055,0,0,0,0,0,0,0,0,0,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0.533637789017222,0.606255142892519,0,0.604780586659361,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0,0,0.120859449591622,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0.254876273045038,0,0,1.53481913652154,4.18296721639841,0,0,0,0.412164046590889,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.170453254832202,0.356128142586949,0.330569830721956,0,0,0.30347334256665,0.929691098594572,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.847294206991012,0,1.68471475667626,0,0,1.01489521846434,0,0,0.476463550915578,0.411362273086194,0,0,1.58625035258854,0.106824071127473,0,0.245040215981032,0.557409525377156,0,0.782560276832555,0,0,0,0.211673582723883,0.324621940274555,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0.540911356951966,0,0,0,0,0,0.111443384277478,0,1.19372242368845,0,0.614321404198464,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,1.96935688737711,0.311039587661807,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0.520855522170466,0,0.724999575434793,0,0.254253650292766,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.41827123283581,0.769502585037971,0,0.23056390438806,0.269272933229316,3.04212641381623,0,0,0,0,0.156980256395025,0.166211681900156,0.225595660617181,0.588187602953219,0.167821586975843,0.37950746544837,0.635746315921515,0,0,0.282706142867882,0.432777279484182,0,0.0884575645033392,0,1.77912677208373,0.247127877893006,0.730953646538188,0,0,0,0,0,0,0,0,0,0.189559738885464,0.901940516486955,0,0,0,0,0,0,0,0,0.293977192243133,0,0.34945333648406,0,0,0.0730893170861856,0.0821154570532092,0.290967049465258,0,0,0,0,0,0.195551382734803,0,0,0,0,0.229073192331831,0,1.00838358591705,0,0.235694034616795,0,0,0.101998217636322,0,0,0,1.27746588066972,0.429765441419957,1.05154941711726,0,0,0,0.599037001496973,0,0,0.268733889946905,0,1.16495949527454,1.41809728153003,2.30764403467266,1.61768505250044,0,0.338693328263138,0,0,0.160753148465019,0.137539436597234,0,0.2249738915515,0,0,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0.164185041498678,0,0,0.439656701034247,1.32506888912221,0,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0.487170393523584,0.638341257770182,0.544017803369474,0,0,0,0.314108192500469,0,0,0,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.930053882193542,0.817826971279221,0,0,0,0.999936979274649,0.106691729694141,0.172214979660816,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.235939446695481,0.183428598521679,0.231051332300676,0.381382095467167,0.690359926060101,0.198916222116275,0.150420656698515,0.20170506870352,0,0,0.327543835020193,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.887023701626388,0.345701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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0.436882744260345,0.791300934685361,0.123766352960047,0,0,0,0,0,0,0,0.626909442956176,0,0.136874425072884,0,0.229240217243854,0.328402357799783,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0,0.651032612147555,0,0,0.257575567634187,0,0,0,0.232429036905685,0.822335776043652,0,0.863077176966451,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0.188242339542605,0.545812300115692,0.224723484445085,0,0.320929027076094,0,0,0,0.426224750532694,3.48251086354301,0,0.622822248995575,0.251248665256743,0,0,2.42159801053347,1.10483290796269,2.84816148696796,0.422510572623884,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.474541238222193,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0.245976877086227,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.977208552881205,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0.224170287987055,0,0,0,0,0,0,0,0,0,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0.533637789017222,0.606255142892519,0,0.604780586659361,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0,0,0.120859449591622,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0.254876273045038,0,0,1.53481913652154,4.18296721639841,0,0,0,0.412164046590889,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.170453254832202,0.356128142586949,0.330569830721956,0,0,0.30347334256665,0.929691098594572,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.847294206991012,0,1.68471475667626,0,0,1.01489521846434,0,0,0.476463550915578,0.411362273086194,0,0,1.58625035258854,0.106824071127473,0,0.245040215981032,0.557409525377156,0,0.782560276832555,0,0,0,0.211673582723883,0.324621940274555,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0.540911356951966,0,0,0,0,0,0.111443384277478,0,1.19372242368845,0,0.614321404198464,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,1.96935688737711,0.311039587661807,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0.520855522170466,0,0.724999575434793,0,0.254253650292766,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.41827123283581,0.769502585037971,0,0.23056390438806,0.269272933229316,3.04212641381623,0,0,0,0,0.156980256395025,0.166211681900156,0.225595660617181,0.588187602953219,0.167821586975843,0.37950746544837,0.635746315921515,0,0,0.282706142867882,0.432777279484182,0,0.0884575645033392,0,1.77912677208373,0.247127877893006,0.730953646538188,0,0,0,0,0,0,0,0,0,0.189559738885464,0.901940516486955,0,0,0,0,0,0,0,0,0.293977192243133,0,0.34945333648406,0,0,0.0730893170861856,0.0821154570532092,0.290967049465258,0,0,0,0,0,0.195551382734803,0,0,0,0,0.229073192331831,0,1.00838358591705,0,0.235694034616795,0,0,0.101998217636322,0,0,0,1.27746588066972,0.429765441419957,1.05154941711726,0,0,0,0.599037001496973,0,0,0.268733889946905,0,1.16495949527454,1.41809728153003,2.30764403467266,1.61768505250044,0,0.338693328263138,0,0,0.160753148465019,0.137539436597234,0,0.2249738915515,0,0,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0.164185041498678,0,0,0.439656701034247,1.32506888912221,0,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0.487170393523584,0.638341257770182,0.544017803369474,0,0,0,0.314108192500469,0,0,0,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.930053882193542,0.817826971279221,0,0,0,0.999936979274649,0.106691729694141,0.172214979660816,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.235939446695481,0.183428598521679,0.231051332300676,0.381382095467167,0.690359926060101,0.198916222116275,0.150420656698515,0.20170506870352,0,0,0.327543835020193,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.887023701626388,0.345701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| ||
|short_description=p12@SIAH2 | |short_description=p12@SIAH2 | ||
}} | }} |
Latest revision as of 00:15, 16 September 2015
Short description: | p12@SIAH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SIAH2_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000312960_5end |
EntrezGene: | SIAH2 |
HGNC: | 10858 |
UniProt: | O43255 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 9.32e-16 | 2 |
erythroblast | 9.32e-16 | 2 |
megakaryocyte-erythroid progenitor cell | 9.32e-16 | 2 |
erythroid progenitor cell | 9.32e-16 | 2 |
reticulocyte | 9.32e-16 | 2 |
proerythroblast | 9.32e-16 | 2 |
basophilic erythroblast | 9.32e-16 | 2 |
polychromatophilic erythroblast | 9.32e-16 | 2 |
orthochromatic erythroblast | 9.32e-16 | 2 |
hepatocyte | 9.05e-15 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.82e-13 | 19 |
digestive gland | 4.82e-13 | 19 |
liver bud | 4.82e-13 | 19 |
hepatic diverticulum | 3.38e-11 | 22 |
liver primordium | 3.38e-11 | 22 |
digestive tract diverticulum | 1.09e-10 | 23 |
epithelial sac | 8.56e-10 | 25 |
epithelium of foregut-midgut junction | 8.56e-10 | 25 |
anatomical boundary | 8.56e-10 | 25 |
hepatobiliary system | 8.56e-10 | 25 |
foregut-midgut junction | 8.56e-10 | 25 |
septum transversum | 8.56e-10 | 25 |
sac | 2.13e-09 | 26 |
blood | 7.58e-08 | 15 |
haemolymphatic fluid | 7.58e-08 | 15 |
organism substance | 7.58e-08 | 15 |
exocrine gland | 8.48e-08 | 31 |
exocrine system | 8.48e-08 | 31 |
endocrine gland | 7.57e-07 | 35 |