FFCP PHASE1:Hg19::chr19:13213662..13213686,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:13213662..13213686,- to FFCP PHASE1:Hg19::chr19:13213662..13213686,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4066 | |EntrezGene=4066 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6734 | |HGNC=6734 | ||
|TSSclassifier=strong | |||
|UniProt=P12980 | |UniProt=P12980 | ||
|association_with_transcript=0bp_to_ENST00000264824,uc002mwi.2_5end | |||
|cluster_id=chr19:13213662..13213686,- | |||
|coexpression_cluster_id=C3755 | |||
|description=CAGE_peak_1_at_LYL1_5end | |||
|id=chr19:13213662..13213686,- | |||
|ontology_enrichment_celltype=CL:0000037!5.16e-43!172;CL:0000566!5.16e-43!172;CL:0000988!3.48e-42!182;CL:0002032!9.83e-42!165;CL:0000837!9.83e-42!165;CL:0000763!4.80e-39!112;CL:0000049!4.80e-39!112;CL:0000766!6.06e-28!76;CL:0000738!1.17e-27!140;CL:0002031!1.45e-25!124;CL:0000839!2.07e-25!70;CL:0002087!2.89e-25!119;CL:0000557!1.85e-23!71;CL:0002057!3.24e-22!42;CL:0002194!4.35e-22!63;CL:0000576!4.35e-22!63;CL:0000040!4.35e-22!63;CL:0000559!4.35e-22!63;CL:0002009!2.55e-20!65;CL:0000860!7.89e-19!45;CL:0000115!2.05e-14!35;CL:0002139!7.86e-11!24;CL:0000945!9.16e-10!24;CL:0000826!9.16e-10!24;CL:0002078!3.68e-09!44;CL:0000071!4.33e-09!18;CL:0002546!4.33e-09!18;CL:0000236!8.77e-09!14;CL:0000213!3.13e-07!57;CL:0000215!3.13e-07!57;CL:0002393!6.74e-07!9;CL:0002397!6.74e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.15e-19;48!CL:0000860;1.05e-18;33!CL:0002057;1.05e-18;33!CL:0000473;2.38e-18;39!CL:0000234;2.38e-18;39!CL:0000763;9.99e-18;100!CL:0000766;1.79e-17;69!CL:0000115;5.09e-15;36!CL:0002139;3.77e-13;24!CL:0000945;5.05e-11;24!CL:0000071;6.30e-11;18!CL:0000236;1.52e-10;13!CL:0002087;3.00e-10;104!CL:0000988;9.27e-10;177!CL:0000738;3.32e-09;136!CL:0002078;1.28e-07;45!CL:1000413;5.15e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.15e-57,168;CL:0002032,2.43e-55,161;CL:0000837,2.43e-55,161;CL:0000988,2.20e-54,177;CL:0000763,1.71e-53,108;CL:0000049,1.71e-53,108;CL:0000766,3.13e-40,72;CL:0000738,9.05e-38,136;CL:0000839,4.88e-37,66;CL:0002031,1.58e-35,120;CL:0000557,5.89e-35,67;CL:0002087,1.14e-34,115;CL:0002194,8.83e-33,59;CL:0000576,8.83e-33,59;CL:0000040,8.83e-33,59;CL:0000559,8.83e-33,59;CL:0002009,7.63e-31,61;CL:0000473,3.81e-30,48;CL:0000234,3.81e-30,48;CL:0000860,3.02e-27,42;CL:0002057,3.02e-27,42;CL:0000115,1.56e-17,36;CL:0002139,4.42e-13,24;CL:0002078,2.99e-11,45;CL:0000945,4.72e-11,24;CL:0000826,4.72e-11,24;CL:0000071,6.43e-11,18;CL:0002546,6.43e-11,18;CL:0000236,1.54e-10,14;CL:0002393,3.37e-08,9;CL:0002397,3.37e-08,9;CL:0000134,1.24e-07,354;CL:0000213,2.03e-07,58;CL:0000215,2.03e-07,58;CL:1000413,5.35e-07,9;CL:0002320,8.77e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-19;42!CL:0000049;1.29e-15;108!CL:0002546;6.30e-11;18 | |||
|ontology_enrichment_disease=DOID:8692!1.12e-14!31;DOID:1240!2.79e-12!39;DOID:2531!4.71e-10!51;DOID:0060083!4.71e-10!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.60e-16;31!DOID:1240;6.42e-12;39!DOID:2531;8.01e-08;51!DOID:0060083;8.01e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.61e-17,31;DOID:1240,8.10e-15,39;DOID:2531,7.45e-13,51;DOID:0060083,7.45e-13,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!8.95e-30!112;UBERON:0002390!2.17e-27!102;UBERON:0003061!2.17e-27!102;UBERON:0003081!1.51e-22!216;UBERON:0002405!4.02e-21!115;UBERON:0002371!5.13e-20!80;UBERON:0001474!2.56e-16!86;UBERON:0007023!3.75e-16!115;UBERON:0004765!1.11e-11!101;UBERON:0001434!1.11e-11!101;UBERON:0000178!3.17e-09!15;UBERON:0000179!3.17e-09!15;UBERON:0000463!3.17e-09!15;UBERON:0001986!4.33e-09!18;UBERON:0004638!4.33e-09!18;UBERON:0004852!4.33e-09!18;UBERON:0004535!4.17e-07!110;UBERON:0001009!7.39e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.40e-11;15!UBERON:0000179;4.40e-11;15!UBERON:0000463;4.40e-11;15!UBERON:0004638;6.30e-11;18!UBERON:0001986;6.30e-11;18!UBERON:0004852;6.30e-11;18!UBERON:0000487;1.14e-07;22!UBERON:0002193;4.05e-07;42!UBERON:0003915;5.15e-07;9!UBERON:0004700;5.15e-07;9!UBERON:0001917;5.15e-07;9!UBERON:0002390;6.54e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.35e-43,108;UBERON:0002390,7.81e-40,98;UBERON:0003061,7.81e-40,98;UBERON:0002405,5.42e-33,93;UBERON:0002371,2.83e-30,76;UBERON:0003081,2.45e-29,203;UBERON:0001474,5.96e-26,82;UBERON:0004765,3.44e-21,90;UBERON:0001434,1.79e-16,100;UBERON:0007023,3.62e-15,114;UBERON:0000178,4.37e-11,15;UBERON:0000179,4.37e-11,15;UBERON:0000463,4.37e-11,15;UBERON:0004638,6.43e-11,18;UBERON:0001986,6.43e-11,18;UBERON:0004852,6.43e-11,18;UBERON:0000926,1.96e-08,315;UBERON:0004120,1.96e-08,315;UBERON:0006603,1.96e-08,315;UBERON:0000487,1.16e-07,22;UBERON:0003915,5.35e-07,9;UBERON:0004700,5.35e-07,9;UBERON:0001917,5.35e-07,9 | |||
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| ||
|short_description=p1@LYL1 | |||
}} | }} |
Latest revision as of 00:09, 16 September 2015
Short description: | p1@LYL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LYL1_5end |
Coexpression cluster: | C3755_CD14CD16_acute_CD19_granulocyte_CD133_CD14_Whole |
Association with transcript: | 0bp_to_ENST00000264824, uc002mwi.2_5end |
EntrezGene: | LYL1 |
HGNC: | 6734 |
UniProt: | P12980 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.35e-43 | 108 |
hematopoietic system | 7.81e-40 | 98 |
blood island | 7.81e-40 | 98 |
immune system | 5.42e-33 | 93 |
bone marrow | 2.83e-30 | 76 |
lateral plate mesoderm | 2.45e-29 | 203 |
bone element | 5.96e-26 | 82 |
skeletal element | 3.44e-21 | 90 |
skeletal system | 1.79e-16 | 100 |
adult organism | 3.62e-15 | 114 |
blood | 4.37e-11 | 15 |
haemolymphatic fluid | 4.37e-11 | 15 |
organism substance | 4.37e-11 | 15 |
blood vessel endothelium | 6.43e-11 | 18 |
endothelium | 6.43e-11 | 18 |
cardiovascular system endothelium | 6.43e-11 | 18 |
mesoderm | 1.96e-08 | 315 |
mesoderm-derived structure | 1.96e-08 | 315 |
presumptive mesoderm | 1.96e-08 | 315 |
simple squamous epithelium | 1.16e-07 | 22 |
endothelial tube | 5.35e-07 | 9 |
arterial system endothelium | 5.35e-07 | 9 |
endothelium of artery | 5.35e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.61e-17 | 31 |
leukemia | 8.10e-15 | 39 |
hematologic cancer | 7.45e-13 | 51 |
immune system cancer | 7.45e-13 | 51 |