FFCP PHASE1:Hg19::chr12:93963755..93963796,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:93963755..93963796,+
|short_description=p7@SOCS2
|description=CAGE_peak_7_at_SOCS2_5end
|association_with_transcript=157bp_to_NM_003877,uc001tcw.1_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8835 | |EntrezGene=8835 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19382 | |HGNC=19382 | ||
|TSSclassifier=strong | |||
|UniProt=A8K3D1,O14508 | |UniProt=A8K3D1,O14508 | ||
|association_with_transcript=157bp_to_NM_003877,uc001tcw.1_5end | |||
|cluster_id=chr12:93963755..93963796,+ | |||
|coexpression_cluster_id=C167 | |||
|description=CAGE_peak_7_at_SOCS2_5end | |||
|id=chr12:93963755..93963796,+ | |||
|ontology_enrichment_celltype=CL:0000080!8.48e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000767;8.77e-13;3!CL:0000081;1.46e-12;11!CL:0000094;2.24e-12;8!CL:0000097;3.00e-12;5!CL:0000771;5.67e-09;2!CL:0000163;8.24e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,9.16e-13,3;CL:0000081,1.42e-12,11;CL:0000094,2.17e-12,8;CL:0000097,3.11e-12,5;CL:0002028,3.11e-12,5;CL:0000771,5.16e-09,2;CL:0000163,8.39e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;5.28e-16;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.76e-16,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.95e-23!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;6.11e-09;4!UBERON:0010133;6.11e-09;4!UBERON:0001905;3.24e-08;2!UBERON:0002757;3.24e-08;2!UBERON:0010134;3.24e-08;2!UBERON:0005408;3.24e-08;2!UBERON:0001899;3.24e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,9.84e-09,4;UBERON:0010133,9.84e-09,4;UBERON:0001905,5.59e-08,2;UBERON:0002757,5.59e-08,2;UBERON:0010134,5.59e-08,2;UBERON:0005408,5.59e-08,2;UBERON:0001899,5.59e-08,2 | |||
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| ||
|short_description=p7@SOCS2 | |||
}} | }} |
Latest revision as of 00:06, 16 September 2015
Short description: | p7@SOCS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SOCS2_5end |
Coexpression cluster: | C167_Basophils_Mast_Eosinophils_Neutrophils_Peripheral_Whole_CD4 |
Association with transcript: | 157bp_to_NM_003877, uc001tcw.1_5end |
EntrezGene: | SOCS2 |
HGNC: | 19382 |
UniProt: | A8K3D1O14508 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 9.16e-13 | 3 |
blood cell | 1.42e-12 | 11 |
granulocyte | 2.17e-12 | 8 |
mast cell | 3.11e-12 | 5 |
basophil mast progenitor cell | 3.11e-12 | 5 |
eosinophil | 5.16e-09 | 2 |
endocrine cell | 8.39e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 9.84e-09 | 4 |
neuroendocrine gland | 9.84e-09 | 4 |
pineal body | 5.59e-08 | 2 |
regional part of epithalamus | 5.59e-08 | 2 |
secretory circumventricular organ | 5.59e-08 | 2 |
circumventricular organ | 5.59e-08 | 2 |
epithalamus | 5.59e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.76e-16 | 8 |