FFCP PHASE1:Hg19::chr11:118215036..118215085,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=917 | |EntrezGene=917 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1675 | |HGNC=1675 | ||
|TSSclassifier=strong | |||
|UniProt=P09693,A8MUH3,B0YIY5 | |UniProt=P09693,A8MUH3,B0YIY5 | ||
|association_with_transcript=0bp_to_ENST00000292144,ENST00000392883,ENST00000527777,ENST00000532917,ENST00000533462,NM_000073,uc001psu.2_5end | |association_with_transcript=0bp_to_ENST00000292144,ENST00000392883,ENST00000527777,ENST00000532917,ENST00000533462,NM_000073,uc001psu.2_5end | ||
|cluster_id=chr11:118215036..118215085,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_1_at_CD3G_5end | |description=CAGE_peak_1_at_CD3G_5end | ||
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|ontology_enrichment_celltype=CL:0000738!9.51e-28!140;CL:0002087!1.26e-22!119;CL:0000037!5.54e-22!172;CL:0000566!5.54e-22!172;CL:0000084!4.57e-20!25;CL:0000827!4.57e-20!25;CL:0000988!3.99e-19!182;CL:0002031!4.00e-19!124;CL:0002032!1.89e-18!165;CL:0000837!1.89e-18!165;CL:0000791!2.00e-18!18;CL:0000789!2.00e-18!18;CL:0002420!2.00e-18!18;CL:0002419!2.00e-18!18;CL:0000790!2.00e-18!18;CL:0000838!3.98e-12!52;CL:0000625!7.42e-12!11;CL:0000542!1.10e-11!53;CL:0000051!1.10e-11!53;CL:0002057!1.65e-11!42;CL:0000766!4.27e-11!76;CL:0000860!4.15e-10!45;CL:0002009!1.31e-09!65;CL:0002194!1.38e-09!63;CL:0000576!1.38e-09!63;CL:0000040!1.38e-09!63;CL:0000559!1.38e-09!63;CL:0000557!2.12e-08!71;CL:0000763!3.27e-08!112;CL:0000049!3.27e-08!112;CL:0000839!4.38e-08!70;CL:0000624!2.34e-07!6 | |ontology_enrichment_celltype=CL:0000738!9.51e-28!140;CL:0002087!1.26e-22!119;CL:0000037!5.54e-22!172;CL:0000566!5.54e-22!172;CL:0000084!4.57e-20!25;CL:0000827!4.57e-20!25;CL:0000988!3.99e-19!182;CL:0002031!4.00e-19!124;CL:0002032!1.89e-18!165;CL:0000837!1.89e-18!165;CL:0000791!2.00e-18!18;CL:0000789!2.00e-18!18;CL:0002420!2.00e-18!18;CL:0002419!2.00e-18!18;CL:0000790!2.00e-18!18;CL:0000838!3.98e-12!52;CL:0000625!7.42e-12!11;CL:0000542!1.10e-11!53;CL:0000051!1.10e-11!53;CL:0002057!1.65e-11!42;CL:0000766!4.27e-11!76;CL:0000860!4.15e-10!45;CL:0002009!1.31e-09!65;CL:0002194!1.38e-09!63;CL:0000576!1.38e-09!63;CL:0000040!1.38e-09!63;CL:0000559!1.38e-09!63;CL:0000557!2.12e-08!71;CL:0000763!3.27e-08!112;CL:0000049!3.27e-08!112;CL:0000839!4.38e-08!70;CL:0000624!2.34e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;4.19e-27;25!CL:0000791;3.48e-26;18!CL:0000789;3.48e-26;18!CL:0002419;3.48e-26;18!CL:0000625;1.41e-16;11!CL:0000624;5.01e-10;6!CL:0002087;7.97e-09;104!CL:0000542;1.09e-08;53 | |ontology_enrichment_celltype_v019=CL:0000084;4.19e-27;25!CL:0000791;3.48e-26;18!CL:0000789;3.48e-26;18!CL:0002419;3.48e-26;18!CL:0000625;1.41e-16;11!CL:0000624;5.01e-10;6!CL:0002087;7.97e-09;104!CL:0000542;1.09e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.27e-27,25;CL:0000827,4.27e-27,25;CL:0000791,3.54e-26,18;CL:0000789,3.54e-26,18;CL:0002420,3.54e-26,18;CL:0002419,3.54e-26,18;CL:0000790,3.54e-26,18;CL:0000738,8.42e-26,136;CL:0002087,1.48e-21,115;CL:0000037,2.23e-20,168;CL:0000988,2.36e-18,177;CL:0002032,2.34e-17,161;CL:0000837,2.34e-17,161;CL:0002031,8.56e-17,120;CL:0000625,1.42e-16,11;CL:0000838,5.51e-15,52;CL:0000542,1.54e-14,53;CL:0000051,1.54e-14,53;CL:0000624,5.06e-10,6;CL:0000766,2.47e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000790;3.48e-26;18!CL:0000051;1.09e-08;53 | |ontology_enrichment_development_v019=CL:0000790;3.48e-26;18!CL:0000051;1.09e-08;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.42e-27!115;UBERON:0002390!4.95e-15!102;UBERON:0003061!4.95e-15!102;UBERON:0002193!1.17e-13!112;UBERON:0000178!7.99e-09!15;UBERON:0000179!7.99e-09!15;UBERON:0000463!7.99e-09!15;UBERON:0002371!9.72e-07!80 | |ontology_enrichment_uberon=UBERON:0007023!4.42e-27!115;UBERON:0002390!4.95e-15!102;UBERON:0003061!4.95e-15!102;UBERON:0002193!1.17e-13!112;UBERON:0000178!7.99e-09!15;UBERON:0000179!7.99e-09!15;UBERON:0000463!7.99e-09!15;UBERON:0002371!9.72e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.41e-13;15!UBERON:0000179;7.41e-13;15!UBERON:0000463;7.41e-13;15!UBERON:0002390;5.79e-08;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;7.41e-13;15!UBERON:0000179;7.41e-13;15!UBERON:0000463;7.41e-13;15!UBERON:0002390;5.79e-08;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.43e-13,98;UBERON:0003061,2.43e-13,98;UBERON:0000178,7.36e-13,15;UBERON:0000179,7.36e-13,15;UBERON:0000463,7.36e-13,15;UBERON:0002193,9.79e-13,108;UBERON:0007023,1.11e-09,114;UBERON:0004177,5.19e-08,7;UBERON:0005057,5.19e-08,7;UBERON:0002370,2.95e-07,4;UBERON:0005058,2.95e-07,4;UBERON:0009113,2.95e-07,4;UBERON:0003295,2.95e-07,4;UBERON:0005562,2.95e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.2748495655963,100.56330230147,11.3015770020735,0,0,0,1.39440961044543,0,0.293600439334847,23.8218025668707,33.4909227275137,15.1907609501096,4.70222495903841,19.4336199611388,6.95454032612304,0.436194716338694,0.377875943688809,1.4555043671269,0.697287110717054,0.822335776043652,0.309706370895104,1.1507695692886,1.0246428261164,0.709446689665756,3.10271112662957,1.93645405075148,0,1.12945403725563,0.818718450173537,1.12361742222542,2.44867113896722,5.77672248736969,1.91801137739712,0.659702600373432,0.797854630486527,0.426224750532694,2.32167390902867,2.8369261234557,1.24564449799115,1.00499466102697,0.521482918420201,1.3031330682307,3.02699751316684,3.31449872388808,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.800791974072025,0,0,0,0,0,1.52909291250092,0,11.7706798226123,0,147.729037355489,122.619357977739,118.837666421716,228.376752703666,120.591238654428,78.118887946231,132.48217531738,351.277170558952,164.095490463484,158.396734627289,336.880006523679,164.98161980667,184.554214187467,143.389852814406,152.268859800002,290.382691906523,211.308352505936,192.629396224593,167.256838087963,260.498178861705,118.798353016596,88.9995083800011,267.947853848653,68.4915640796808,72.9213468319189,70.3334512891797,151.026844435006,173.677831336546,68.7118996037902,81.9249292072298,77.1860317105784,200.397102765384,123.824810647764,116.728469529536,0,0,0,0,0,0,0,0,0,0,0.263504357079378,3.27447688744282,0,0,1.62273696827342,1.74129737299267,0.797747763113191,0.715471872916026,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,19.3890132074163,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0.590789906681404,154.512084795128,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.8847786698122,152.698839156494,136.923510035793,43.379946262555,0,0,0,0,0,0,0,7.45947924184864,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,132.951840797017,41.6328407579931,74.9227455780179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1754700926492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98818933778395,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.422215270595328,0,0,0,0,1.34060455107157,0,3.10674542563371,0,0,0,0,65.968189200182,64.9941626071019,43.8628334124105,101.963199895934,102.429205998462,64.198857808079,69.1240239664787,38.070008462125,0,0,0,0,0,213.0698208285,172.818079638043,0.997896857164083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,1.75809815126273,0,0.780103689942349,0,0,1.18785872333055,0,0,0.140669416410513,0,0,0,1.39473591775749,13.2616279454951,0,0,0,0,0,0,0,2.07151151837561,57.4759421632656,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0,1.07730361905316,0,0,0,0,0.638002319463839,0,2.13213910407454,124.675823798799,0,0,1.57916962432026,1.76456280885966,1.84603745673427,1.13852239634511,0,0,0,1.83758992864123,0,3.98104772431402,4.5113357896703,3.05515072466813,0,0,0,0.606610196826093,0,0,0.182454789215666,0,0,0.394584402849391,10.8891644443797,0,6.69777744061972,0,0.103688191397247,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,2.71569246167574,0,0,0,0,0.633107959558787,0,0,3.62870091056899,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.687481272035051,0.717873024576814,0,0.429226048136571,0.223171457441873,0.403100834920358,0,0,0,0,0,0.0984274815147488,0.338693328263138,0.795229689809303,0.272406812223151,0.160753148465019,0,0,0.674921674654501,0,0.242998226632099,0,1.89133697518076,0.577000469484979,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0.26446520348538,0,0,8.1158433551448,2.35806457649499,4.14239055347196,26.2967991560334,0,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0.1251909307065,0,0.776503360757966,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,4.28692679446655,5.18172877222116,0.981392365535065,0,0,0,46.9970380259085,0,0,0,0,0,4.97661808026378,0,0,0,0,0.509197589862076,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.138314504928436,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,1.35378591028663,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0.253663240775627,0,2.74128883428591,1.98484471355718,0,0,0,0,0,0.227662191351298,0.443511850813194,0,0,0.40781839786099,0,0,0,1.88383422841234,0,0,0,0,0,1.6439605160631,0,0,0,0,0,0,0,4.30227358820278,0,0,0,0,0,0,0,0,0,0,0.615976841137482,0,0.485710993059139,0,0,0,0.11294608203896,0,0,11.113078767544,5.4639890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| ||
|short_description=p1@CD3G | |short_description=p1@CD3G | ||
}} | }} |
Latest revision as of 00:05, 16 September 2015
Short description: | p1@CD3G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD3G_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000292144, ENST00000392883, ENST00000527777, ENST00000532917, ENST00000533462, NM_000073, uc001psu.2_5end |
EntrezGene: | CD3G |
HGNC: | 1675 |
UniProt: | P09693A8MUH3B0YIY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.27e-27 | 25 |
pro-T cell | 4.27e-27 | 25 |
mature alpha-beta T cell | 3.54e-26 | 18 |
alpha-beta T cell | 3.54e-26 | 18 |
immature T cell | 3.54e-26 | 18 |
mature T cell | 3.54e-26 | 18 |
immature alpha-beta T cell | 3.54e-26 | 18 |
leukocyte | 8.42e-26 | 136 |
nongranular leukocyte | 1.48e-21 | 115 |
hematopoietic stem cell | 2.23e-20 | 168 |
hematopoietic cell | 2.36e-18 | 177 |
hematopoietic oligopotent progenitor cell | 2.34e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.34e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 8.56e-17 | 120 |
CD8-positive, alpha-beta T cell | 1.42e-16 | 11 |
lymphoid lineage restricted progenitor cell | 5.51e-15 | 52 |
lymphocyte | 1.54e-14 | 53 |
common lymphoid progenitor | 1.54e-14 | 53 |
CD4-positive, alpha-beta T cell | 5.06e-10 | 6 |
myeloid leukocyte | 2.47e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.43e-13 | 98 |
blood island | 2.43e-13 | 98 |
blood | 7.36e-13 | 15 |
haemolymphatic fluid | 7.36e-13 | 15 |
organism substance | 7.36e-13 | 15 |
hemolymphoid system | 9.79e-13 | 108 |
adult organism | 1.11e-09 | 114 |
hemopoietic organ | 5.19e-08 | 7 |
immune organ | 5.19e-08 | 7 |
thymus | 2.95e-07 | 4 |
hemolymphoid system gland | 2.95e-07 | 4 |
thymic region | 2.95e-07 | 4 |
pharyngeal gland | 2.95e-07 | 4 |
thymus primordium | 2.95e-07 | 4 |