FFCP PHASE2:Hg19::chr4:147560042..147560046,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5458 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:9219 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9219 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q12837 | ||
|association_with_transcript=0bp_to_ENST00000281321,NM_004575,uc003ikv.2_5end | |association_with_transcript=0bp_to_ENST00000281321,NM_004575,uc003ikv.2_5end | ||
|cluster_id=chr4:147560042..147560046,+ | |cluster_id=chr4:147560042..147560046,+ |
Latest revision as of 23:53, 15 September 2015
Short description: | p1@POU4F2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_POU4F2_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 0bp_to_ENST00000281321, NM_004575, uc003ikv.2_5end |
EntrezGene: | POU4F2 |
HGNC: | 9219 |
UniProt: | Q12837 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@POU4F2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mast cell | 6.55e-08 | 5 |
basophil mast progenitor cell | 6.55e-08 | 5 |
smooth muscle cell of the subclavian artery | 7.01e-08 | 5 |
chondroblast | 7.17e-07 | 6 |
chondrocyte | 7.17e-07 | 6 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
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neural tissue | 7.67e-18 | 2 |
cartilage tissue | 1.85e-12 | 3 |
skeletal tissue | 1.85e-12 | 3 |
sympathetic nervous system | 6.13e-08 | 5 |
autonomic nervous system | 6.13e-08 | 5 |
thoracic segment blood vessel | 7.01e-08 | 5 |
subclavian artery | 7.01e-08 | 5 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.84e-34 | 1 |
extraosseous chondrosarcoma | 1.84e-34 | 1 |
myxoid chondrosarcoma | 1.84e-34 | 1 |
extraskeletal myxoid chondrosarcoma | 1.84e-34 | 1 |
peripheral nerve sheath neoplasm | 7.67e-18 | 2 |
neurofibroma | 7.67e-18 | 2 |
neuroectodermal tumor | 3.71e-14 | 10 |
peripheral nervous system neoplasm | 2.31e-12 | 3 |
sarcoma | 1.21e-07 | 20 |
germ cell and embryonal cancer | 5.74e-07 | 22 |
Showing 1 to 10 of 14 entries