FFCP PHASE1:Hg19::chr3:150264734..150264749,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:150264734..150264749,- to FFCP PHASE1:Hg19::chr3:150264734..150264749,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27230 | |EntrezGene=27230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10759 | |HGNC=10759 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=214bp_to_uc003exy.2_5end | |||
|cluster_id=chr3:150264734..150264749,- | |||
|description=CAGE_peak_10_at_SERP1_5end | |||
|id=chr3:150264734..150264749,- | |||
|ontology_enrichment_celltype=CL:0000012!1.80e-14!682;CL:0000548!1.43e-13!679;CL:0000004!1.43e-13!679;CL:0000255!1.43e-13!679;CL:0000144!2.64e-11!625;CL:0000003!3.70e-11!722;CL:0002139!1.75e-09!24;CL:0002371!1.34e-08!591;CL:0000071!5.27e-08!18;CL:0002546!5.27e-08!18;CL:0000063!8.17e-08!578;CL:0000222!1.44e-07!119;CL:0000115!5.65e-07!35;CL:0000076!8.17e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000071;2.20e-18;18!CL:0002139;3.49e-15;24!CL:0000945;1.84e-13;24!CL:1000413;1.09e-11;9!CL:0000115;1.29e-10;36!CL:0002543;3.10e-09;6!CL:0000542;2.10e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,3.81e-19,18;CL:0002546,3.81e-19,18;CL:0002139,8.53e-16,24;CL:0000945,8.12e-14,24;CL:0000826,8.12e-14,24;CL:0000115,1.45e-12,36;CL:1000413,2.40e-12,9;CL:0000838,2.34e-11,52;CL:0000542,4.74e-11,53;CL:0000051,4.74e-11,53;CL:0002087,8.49e-10,115;CL:0000738,1.82e-09,136;CL:0002543,2.65e-09,6;CL:0002078,3.03e-09,45;CL:0002031,4.38e-09,120;CL:0000988,8.48e-08,177;CL:0000213,2.97e-07,58;CL:0000215,2.97e-07,58;CL:0000817,3.37e-07,3;CL:0002032,9.33e-07,161;CL:0000837,9.33e-07,161;CL:0000037,9.42e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002546;2.20e-18;18!CL:0000051;2.10e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.59e-18;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.13e-18,10 | |||
|ontology_enrichment_uberon=UBERON:0000055!8.81e-13!69;UBERON:0001981!4.92e-11!60;UBERON:0007500!4.92e-11!60;UBERON:0004537!4.92e-11!60;UBERON:0006965!4.92e-11!60;UBERON:0002049!5.93e-11!79;UBERON:0007798!5.93e-11!79;UBERON:0001637!1.70e-09!42;UBERON:0003509!1.70e-09!42;UBERON:0004572!1.70e-09!42;UBERON:0004872!3.29e-09!84;UBERON:0004535!2.82e-08!110;UBERON:0001986!5.27e-08!18;UBERON:0004638!5.27e-08!18;UBERON:0004852!5.27e-08!18;UBERON:0004573!6.08e-08!33;UBERON:0004571!6.08e-08!33;UBERON:0001009!2.16e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.20e-18;18!UBERON:0001986;2.20e-18;18!UBERON:0004852;2.20e-18;18!UBERON:0000487;1.91e-14;22!UBERON:0006914;2.50e-12;25!UBERON:0003915;1.09e-11;9!UBERON:0004700;1.09e-11;9!UBERON:0001917;1.09e-11;9!UBERON:0000490;3.73e-11;33!UBERON:0007500;8.16e-10;56!UBERON:0001981;8.16e-10;56!UBERON:0004537;8.16e-10;56!UBERON:0001637;9.63e-09;42!UBERON:0003509;9.63e-09;42!UBERON:0004572;9.63e-09;42!UBERON:0000055;2.59e-08;65!UBERON:0000947;2.57e-07;21!UBERON:0010191;2.57e-07;21!UBERON:0004573;9.65e-07;33!UBERON:0004571;9.65e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.81e-19,18;UBERON:0001986,3.81e-19,18;UBERON:0004852,3.81e-19,18;UBERON:0000487,4.71e-15,22;UBERON:0007500,6.64e-15,59;UBERON:0001981,6.64e-15,59;UBERON:0004537,6.64e-15,59;UBERON:0006965,6.64e-15,59;UBERON:0000055,2.19e-13,68;UBERON:0006914,7.49e-13,25;UBERON:0003915,2.40e-12,9;UBERON:0004700,2.40e-12,9;UBERON:0001917,2.40e-12,9;UBERON:0004872,4.40e-12,83;UBERON:0002049,5.43e-12,78;UBERON:0007798,5.43e-12,78;UBERON:0001637,1.37e-10,42;UBERON:0003509,1.37e-10,42;UBERON:0004572,1.37e-10,42;UBERON:0004535,2.28e-08,109;UBERON:0003081,3.28e-08,203;UBERON:0001009,5.72e-08,112;UBERON:0004573,1.04e-07,33;UBERON:0004571,1.04e-07,33;UBERON:0000947,1.40e-07,21;UBERON:0010191,1.40e-07,21 | |||
|phase1_expression=0.54503513781167,0,0.422863212287913,0,0,0.872338524100369,0,1.26343974685366,0.261185628199839,0.245733936501509,0.697801167972428,0.873765488520689,0.527533956456907,0.495065411840187,0,2.01697543935533,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0.821246550437305,0.376627918784408,1.68109492645493,1.39571002064908,1.18066171970519,0,0.383829398097213,0.619264493264304,0,0.30120591877825,0,1.62681121218633,0,0.880801318004542,0,0.401088894940283,0.217010870715852,0,0,0,0.581592955118259,0.377875943688809,0,0.464858073811369,0,1.54853185447552,0.575384784644301,1.2808035326455,0.47296445977717,1.03423704220986,0.645484683583826,0,0.188242339542605,0,1.12361742222542,1.53041946185451,1.92557416245656,2.55734850319616,0,0.797854630486527,0,1.16083695451434,0.56738522469114,0,0.251248665256743,1.0429658368404,0.65156653411535,0,1.84138817993782,1.58231193720442,0.211255286311942,0,0.209658645508376,0.22465726229299,0,0,0.285012743741249,0,0,0,0,0.889509253863555,1.70692089026603,0.800791974072025,0,0,0,0.569212969109448,0,0.764546456250458,1.32171328579026,0.560508562981536,0.263384084775077,0,0.786021525498329,0.411202997999018,0,0,0.473447805734733,0,0,0,0,0,0,0.260118695119756,0.164437904603676,0.276350017785848,0,0.296573126324121,0,0,0.113309342697566,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0.604820229674197,0,0.289648807765598,0,0.670700859703636,0.767175371061182,0.361439152384566,0.50133791063589,0,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0.370784442784429,0.649094787309367,0.348259474598534,0.930705723632056,0.715471872916026,0.571994910780128,0,1.39133685156694,1.72046919021225,1.38856200643038,0,1.67799774483962,1.92582629358047,1.25396979922086,0.516833518338658,0.35576626268671,0.33472061276467,0.402829317109147,1.52054421143703,0,0.735326160691737,2.43042584364528,1.25019619597712,0.673588117878509,1.12611480483322,1.53316637465883,1.89853131913626,1.28241220751285,1.31780417436063,7.75560528296651,0.436094052142534,0,1.13967460498122,1.45650098894541,0.286836620748814,0.354668382198357,0.560677600142307,0,0.74000264525148,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,1.19558944441441,0.352303495931295,0.161872944368132,0.140450806702248,0,0.122834317311768,0,1.18800285728205,0.494533858557114,0.910161361938026,0,0.168336113954066,0,0.277064115484183,0,0,0.150238058906597,0.794025282120147,0.179389635688862,0.213557388818567,0.635795703478686,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0.292311015483596,0,0,0.323292113637624,0,0.201504196455281,0.339121184620975,0.193260853163297,0.272746120590835,0,0.609868530647977,0.795178609928912,1.2781333715647,0.725627385107593,0.252320850875628,1.09493207722749,1.56449532329816,0.643240938192885,0,1.85747171212792,0,0.354920400119532,0.505754070234305,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0.392442930250692,0,1.4763109092493,0,0,0,0,0.982827216677626,0,1.32438929824395,0.122988438543114,0,0.768251997860379,2.24803506515239,0,0.277765335475589,0.325808305310325,0,1.44331342025273,0,0.234817388471643,0.721832238805369,1.38895653772983,0.761016608938393,0.790204397959275,0.858486162094873,0.246217006087397,0,0.148631162288728,0,0.335964256397719,0.708875486211932,0.268675568108545,0.290633938513962,0,0,0.176096868026452,0.207328115540772,0,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.7333828582095,0.258543431515556,0,0,0.531876233169741,0,0.257207374262142,0,0,0.428933980974443,0,0,0.325736184293735,0,0,0,0,0.899756920638513,0,0,0,0.479249710983165,1.14861935834114,0,0.289562613335158,0,0,0.112085143993527,0.985153801009636,1.50939302401662,0.256686072559497,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0.647142602455851,0.74709290462411,1.5156378572313,1.66435439510497,0.30239029332968,0,0,0.561320188866147,0.640695746278505,0,0.804269605718038,0,0,1.06537035187876,0.328508624055237,0.519254429183621,0.348631135379878,0.362578348774867,0.802025881213139,0.460404944679482,0.34444334449382,0.182091168006717,0.131124414959424,0.451199612907412,0.15403067420883,0,1.46139224653261,0.316654886678627,0,0,0.431831832204279,0,0,0,0,0,0.447749509444357,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0.154048617114644,0.307007349452259,0.275673144969061,0.107420244868274,0.290033387828457,0.0852266274161009,0.267096106940212,0.330569830721956,0,0.255225424989168,0.4046311234222,0.929691098594572,0,0,0.616067160352178,1.59691809095107,1.73986598415015,0.74129687641568,1.00187420719394,0,0.316379424718726,0.571890581771475,0.511795582622668,0.42793898803392,0.318203247925937,0.78494864019923,0.179872457583315,0,0.117812402345686,0.4043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| ||
|short_description=p10@SERP1 | |||
}} | }} |
Latest revision as of 23:53, 15 September 2015
Short description: | p10@SERP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SERP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 214bp_to_uc003exy.2_5end |
EntrezGene: | SERP1 |
HGNC: | 10759 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 3.81e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.81e-19 | 18 |
endothelial cell of vascular tree | 8.53e-16 | 24 |
lymphocyte of B lineage | 8.12e-14 | 24 |
pro-B cell | 8.12e-14 | 24 |
endothelial cell | 1.45e-12 | 36 |
endothelial cell of artery | 2.40e-12 | 9 |
lymphoid lineage restricted progenitor cell | 2.34e-11 | 52 |
lymphocyte | 4.74e-11 | 53 |
common lymphoid progenitor | 4.74e-11 | 53 |
nongranular leukocyte | 8.49e-10 | 115 |
leukocyte | 1.82e-09 | 136 |
vein endothelial cell | 2.65e-09 | 6 |
meso-epithelial cell | 3.03e-09 | 45 |
hematopoietic lineage restricted progenitor cell | 4.38e-09 | 120 |
hematopoietic cell | 8.48e-08 | 177 |
lining cell | 2.97e-07 | 58 |
barrier cell | 2.97e-07 | 58 |
precursor B cell | 3.37e-07 | 3 |
hematopoietic oligopotent progenitor cell | 9.33e-07 | 161 |
hematopoietic multipotent progenitor cell | 9.33e-07 | 161 |
hematopoietic stem cell | 9.42e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.81e-19 | 18 |
endothelium | 3.81e-19 | 18 |
cardiovascular system endothelium | 3.81e-19 | 18 |
simple squamous epithelium | 4.71e-15 | 22 |
epithelial tube open at both ends | 6.64e-15 | 59 |
blood vessel | 6.64e-15 | 59 |
blood vasculature | 6.64e-15 | 59 |
vascular cord | 6.64e-15 | 59 |
vessel | 2.19e-13 | 68 |
squamous epithelium | 7.49e-13 | 25 |
endothelial tube | 2.40e-12 | 9 |
arterial system endothelium | 2.40e-12 | 9 |
endothelium of artery | 2.40e-12 | 9 |
splanchnic layer of lateral plate mesoderm | 4.40e-12 | 83 |
vasculature | 5.43e-12 | 78 |
vascular system | 5.43e-12 | 78 |
artery | 1.37e-10 | 42 |
arterial blood vessel | 1.37e-10 | 42 |
arterial system | 1.37e-10 | 42 |
cardiovascular system | 2.28e-08 | 109 |
lateral plate mesoderm | 3.28e-08 | 203 |
circulatory system | 5.72e-08 | 112 |
systemic artery | 1.04e-07 | 33 |
systemic arterial system | 1.04e-07 | 33 |
aorta | 1.40e-07 | 21 |
aortic system | 1.40e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.13e-18 | 10 |