FFCP PHASE1:Hg19::chr3:150264272..150264329,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27230 | |EntrezGene=27230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10759 | |HGNC=10759 | ||
|TSSclassifier=strong | |||
|UniProt=C9JSB0,C9JUH5 | |UniProt=C9JSB0,C9JUH5 | ||
|association_with_transcript=0bp_to_ENST00000487153,ENST00000491660_5end | |association_with_transcript=0bp_to_ENST00000487153,ENST00000491660_5end | ||
|cluster_id=chr3:150264272..150264329,- | |||
|description=CAGE_peak_1_at_SERP1_5end | |description=CAGE_peak_1_at_SERP1_5end | ||
|id=chr3:150264272..150264329,- | |id=chr3:150264272..150264329,- | ||
|ontology_enrichment_celltype=CL:0000055!4.96e-19!180;CL:0000680!3.29e-13!57;CL:0000056!3.29e-13!57;CL:0000355!3.29e-13!57;CL:0000187!4.37e-13!54;CL:0000192!6.98e-13!42;CL:0000514!6.98e-13!42;CL:0000183!1.33e-12!59;CL:0002321!1.95e-12!248;CL:0000220!2.01e-12!246;CL:0000393!2.30e-11!60;CL:0000211!2.30e-11!60;CL:0000057!3.60e-11!75;CL:0000359!2.31e-09!32;CL:0000548!9.53e-09!679;CL:0000004!9.53e-09!679;CL:0000255!9.53e-09!679;CL:0000012!5.60e-08!682;CL:0000222!5.18e-07!119 | |ontology_enrichment_celltype=CL:0000055!4.96e-19!180;CL:0000680!3.29e-13!57;CL:0000056!3.29e-13!57;CL:0000355!3.29e-13!57;CL:0000187!4.37e-13!54;CL:0000192!6.98e-13!42;CL:0000514!6.98e-13!42;CL:0000183!1.33e-12!59;CL:0002321!1.95e-12!248;CL:0000220!2.01e-12!246;CL:0000393!2.30e-11!60;CL:0000211!2.30e-11!60;CL:0000057!3.60e-11!75;CL:0000359!2.31e-09!32;CL:0000548!9.53e-09!679;CL:0000004!9.53e-09!679;CL:0000255!9.53e-09!679;CL:0000012!5.60e-08!682;CL:0000222!5.18e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000192;3.27e-09;43!CL:0000359;7.36e-09;32!CL:0000187;4.87e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.37e-13,58;CL:0000056,3.37e-13,58;CL:0000355,3.37e-13,58;CL:0000187,4.54e-13,55;CL:0000192,7.83e-13,43;CL:0000514,7.83e-13,43;CL:0002321,2.16e-12,250;CL:0000057,1.43e-11,76;CL:0000393,2.25e-11,61;CL:0000211,2.25e-11,61;CL:0000359,2.31e-09,32;CL:0000222,6.06e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;3.27e-09;43!CL:0000355;2.05e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!4.56e-24!216;UBERON:0005256!1.78e-22!143;UBERON:0003104!2.88e-19!238;UBERON:0009142!2.88e-19!238;UBERON:0000475!3.13e-15!365;UBERON:0000914!5.29e-14!83;UBERON:0002329!5.29e-14!83;UBERON:0003077!5.29e-14!83;UBERON:0003059!5.29e-14!83;UBERON:0007282!5.29e-14!83;UBERON:0009618!5.29e-14!83;UBERON:0007285!5.29e-14!83;UBERON:0000486!2.10e-13!82;UBERON:0004290!1.19e-12!70;UBERON:0000490!2.15e-12!138;UBERON:0000481!1.93e-11!347;UBERON:0009569!7.04e-11!113;UBERON:0001134!9.53e-11!61;UBERON:0002036!9.53e-11!61;UBERON:0003082!9.53e-11!61;UBERON:0004119!1.68e-10!169;UBERON:0000925!1.68e-10!169;UBERON:0006595!1.68e-10!169;UBERON:0002385!4.29e-10!63;UBERON:0001015!4.29e-10!63;UBERON:0000383!4.29e-10!63;UBERON:0005911!4.99e-10!82;UBERON:0000466!5.12e-10!126;UBERON:0003102!1.11e-09!95;UBERON:0003929!6.66e-09!54;UBERON:0001007!2.92e-08!155;UBERON:0001555!2.92e-08!155;UBERON:0007026!2.92e-08!155;UBERON:0003914!1.17e-07!118;UBERON:0002530!1.53e-07!59;UBERON:0000119!4.17e-07!312;UBERON:0000077!7.59e-07!130;UBERON:0005156!7.71e-07!59;UBERON:0000990!7.71e-07!59;UBERON:0000483!8.38e-07!309 | |ontology_enrichment_uberon=UBERON:0002100!4.56e-24!216;UBERON:0005256!1.78e-22!143;UBERON:0003104!2.88e-19!238;UBERON:0009142!2.88e-19!238;UBERON:0000475!3.13e-15!365;UBERON:0000914!5.29e-14!83;UBERON:0002329!5.29e-14!83;UBERON:0003077!5.29e-14!83;UBERON:0003059!5.29e-14!83;UBERON:0007282!5.29e-14!83;UBERON:0009618!5.29e-14!83;UBERON:0007285!5.29e-14!83;UBERON:0000486!2.10e-13!82;UBERON:0004290!1.19e-12!70;UBERON:0000490!2.15e-12!138;UBERON:0000481!1.93e-11!347;UBERON:0009569!7.04e-11!113;UBERON:0001134!9.53e-11!61;UBERON:0002036!9.53e-11!61;UBERON:0003082!9.53e-11!61;UBERON:0004119!1.68e-10!169;UBERON:0000925!1.68e-10!169;UBERON:0006595!1.68e-10!169;UBERON:0002385!4.29e-10!63;UBERON:0001015!4.29e-10!63;UBERON:0000383!4.29e-10!63;UBERON:0005911!4.99e-10!82;UBERON:0000466!5.12e-10!126;UBERON:0003102!1.11e-09!95;UBERON:0003929!6.66e-09!54;UBERON:0001007!2.92e-08!155;UBERON:0001555!2.92e-08!155;UBERON:0007026!2.92e-08!155;UBERON:0003914!1.17e-07!118;UBERON:0002530!1.53e-07!59;UBERON:0000119!4.17e-07!312;UBERON:0000077!7.59e-07!130;UBERON:0005156!7.71e-07!59;UBERON:0000990!7.71e-07!59;UBERON:0000483!8.38e-07!309 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p1@SERP1 | |short_description=p1@SERP1 | ||
}} | }} |
Latest revision as of 23:50, 15 September 2015
Short description: | p1@SERP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SERP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000487153, ENST00000491660_5end |
EntrezGene: | SERP1 |
HGNC: | 10759 |
UniProt: | C9JSB0C9JUH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.37e-13 | 58 |
myoblast | 3.37e-13 | 58 |
multi-potent skeletal muscle stem cell | 3.37e-13 | 58 |
muscle cell | 4.54e-13 | 55 |
smooth muscle cell | 7.83e-13 | 43 |
smooth muscle myoblast | 7.83e-13 | 43 |
embryonic cell | 2.16e-12 | 250 |
fibroblast | 1.43e-11 | 76 |
electrically responsive cell | 2.25e-11 | 61 |
electrically active cell | 2.25e-11 | 61 |
vascular associated smooth muscle cell | 2.31e-09 | 32 |
mesodermal cell | 6.06e-07 | 121 |