FFCP PHASE1:Hg19::chr2:234602089..234602097,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54578 | |EntrezGene=54578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12538 | |HGNC=12538 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-213bp_to_ENST00000484784_5end | |||
|cluster_id=chr2:234602089..234602097,+ | |||
|coexpression_cluster_id=C1898 | |||
|description=CAGE_peak_11_at_UGT1A6_5end | |||
|id=chr2:234602089..234602097,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.75e-12!254;CL:1001319!6.80e-07!1;CL:1000600!6.80e-07!1;CL:0000319!8.49e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.96e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.21e-09,58;CL:0000182,2.96e-08,12;CL:0000066,8.89e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0009497;7.00e-16;13!UBERON:0001041;3.44e-12;30!UBERON:0004161;6.35e-09;11 | |||
|ontology_enrichment_disease=DOID:1749!3.10e-18!14;DOID:305!4.43e-16!106;DOID:0050687!4.26e-12!143;DOID:162!5.93e-08!235;DOID:14566!1.10e-07!239;DOID:5662!6.08e-07!1;DOID:3030!8.49e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:5662;4.10e-23;1!DOID:1749;8.45e-15;14!DOID:7;5.67e-11;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,5.13e-23,1;DOID:305,1.31e-16,106;DOID:1749,8.07e-15,14;DOID:7,2.52e-14,39;DOID:0050687,2.95e-12,143;DOID:162,2.69e-07,235;DOID:14566,3.89e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001255!1.62e-11!2;UBERON:0001556!1.62e-11!2;UBERON:0000365!1.68e-10!5;UBERON:0004119!3.41e-09!169;UBERON:0000925!3.41e-09!169;UBERON:0006595!3.41e-09!169;UBERON:0005910!7.97e-09!6;UBERON:0005911!1.72e-08!82;UBERON:0000344!2.45e-07!12;UBERON:0004645!6.80e-07!1;UBERON:0001256!6.80e-07!1;UBERON:0001259!6.80e-07!1;UBERON:0000998!9.48e-07!1;UBERON:0006868!9.48e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0006562;1.85e-12;2!UBERON:0002423;1.41e-08;25!UBERON:0002394;7.27e-07;4!UBERON:0003928;7.27e-07;4!UBERON:0003343;9.10e-07;4!UBERON:0004785;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,1.16e-09,22;UBERON:0003894,1.16e-09,22;UBERON:0009854,2.86e-09,23;UBERON:0007499,1.41e-08,25;UBERON:0009497,1.41e-08,25;UBERON:0000015,1.41e-08,25;UBERON:0002423,1.41e-08,25;UBERON:0006235,1.41e-08,25;UBERON:0004161,1.41e-08,25;UBERON:0009856,2.86e-08,26;UBERON:0003343,8.14e-07,4;UBERON:0004785,8.14e-07,4 | |||
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|short_description=p11@UGT1A6 | |||
}} | }} |
Latest revision as of 23:32, 15 September 2015
Short description: | p11@UGT1A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_UGT1A6_5end |
Coexpression cluster: | C1898_oral_lung_pharyngeal_bronchial_pleomorphic_squamous_Urothelial |
Association with transcript: | -213bp_to_ENST00000484784_5end |
EntrezGene: | UGT1A6 |
HGNC: | 12538 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.21e-09 | 58 |
hepatocyte | 2.96e-08 | 12 |
epithelial cell | 8.89e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 1.16e-09 | 22 |
liver primordium | 1.16e-09 | 22 |
digestive tract diverticulum | 2.86e-09 | 23 |
epithelial sac | 1.41e-08 | 25 |
epithelium of foregut-midgut junction | 1.41e-08 | 25 |
anatomical boundary | 1.41e-08 | 25 |
hepatobiliary system | 1.41e-08 | 25 |
foregut-midgut junction | 1.41e-08 | 25 |
septum transversum | 1.41e-08 | 25 |
sac | 2.86e-08 | 26 |
mucosa of oral region | 8.14e-07 | 4 |
respiratory system mucosa | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 5.13e-23 | 1 |
carcinoma | 1.31e-16 | 106 |
squamous cell carcinoma | 8.07e-15 | 14 |
disease of anatomical entity | 2.52e-14 | 39 |
cell type cancer | 2.95e-12 | 143 |
cancer | 2.69e-07 | 235 |
disease of cellular proliferation | 3.89e-07 | 239 |