FFCP PHASE1:Hg19::chr2:234601514..234601520,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54578 | |EntrezGene=54578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12538 | |HGNC=12538 | ||
|TSSclassifier=strong | |||
|UniProt=P19224,Q5DSZ8 | |UniProt=P19224,Q5DSZ8 | ||
|association_with_transcript=2bp_to_ENST00000305139,NM_001072,uc002vuv.3,uc010zmy.1_5end | |association_with_transcript=2bp_to_ENST00000305139,NM_001072,uc002vuv.3,uc010zmy.1_5end | ||
|cluster_id=chr2:234601514..234601520,+ | |||
|coexpression_cluster_id=C1504 | |||
|description=CAGE_peak_8_at_UGT1A6_5end | |description=CAGE_peak_8_at_UGT1A6_5end | ||
|id=chr2:234601514..234601520,+ | |id=chr2:234601514..234601520,+ | ||
|ontology_enrichment_celltype=CL:0000159!1.01e-09!2;CL:0000066!1.46e-08!254;CL:0000223!8.64e-07!59 | |ontology_enrichment_celltype=CL:0000159!1.01e-09!2;CL:0000066!1.46e-08!254;CL:0000223!8.64e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.60e-12;12!CL:1000415;3.86e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.06e-12,12;CL:1000415,4.02e-09,2;CL:0000066,1.40e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.79e-11;13!UBERON:0001041;1.84e-08;30!UBERON:0003104;9.52e-08;31!UBERON:0003918;5.34e-07;10!UBERON:0007687;5.34e-07;10 | |||
|ontology_enrichment_disease=DOID:305!2.63e-13!106;DOID:0050687!1.05e-09!143;DOID:299!9.30e-08!25;DOID:1749!1.85e-07!14 | |ontology_enrichment_disease=DOID:305!2.63e-13!106;DOID:0050687!1.05e-09!143;DOID:299!9.30e-08!25;DOID:1749!1.85e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:5662;2.25e-16;1!DOID:3493;4.70e-09;2!DOID:7;9.04e-09;39!DOID:305;8.44e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,3.07e-16,1;DOID:305,1.55e-13,106;DOID:0050687,6.36e-12,143;DOID:7,7.80e-10,39;DOID:3493,4.34e-09,2;DOID:162,9.02e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0003127!1.15e-09!2;UBERON:0001255!1.42e-09!2;UBERON:0001556!1.42e-09!2;UBERON:0005177!4.13e-09!107;UBERON:0004119!5.11e-09!169;UBERON:0000925!5.11e-09!169;UBERON:0006595!5.11e-09!169;UBERON:0009497!4.12e-08!25;UBERON:0000015!4.12e-08!25;UBERON:0002423!4.12e-08!25;UBERON:0006235!4.12e-08!25;UBERON:0004161!4.12e-08!25;UBERON:0005911!1.80e-07!82;UBERON:0009569!2.32e-07!113;UBERON:0008835!6.20e-07!22;UBERON:0003894!6.20e-07!22 | |ontology_enrichment_uberon=UBERON:0003127!1.15e-09!2;UBERON:0001255!1.42e-09!2;UBERON:0001556!1.42e-09!2;UBERON:0005177!4.13e-09!107;UBERON:0004119!5.11e-09!169;UBERON:0000925!5.11e-09!169;UBERON:0006595!5.11e-09!169;UBERON:0009497!4.12e-08!25;UBERON:0000015!4.12e-08!25;UBERON:0002423!4.12e-08!25;UBERON:0006235!4.12e-08!25;UBERON:0004161!4.12e-08!25;UBERON:0005911!1.80e-07!82;UBERON:0009569!2.32e-07!113;UBERON:0008835!6.20e-07!22;UBERON:0003894!6.20e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.98e-15;25!UBERON:0002294;6.55e-10;7!UBERON:0001173;6.55e-10;7!UBERON:0005172;4.04e-09;52!UBERON:0005173;4.04e-09;52!UBERON:0006562;4.70e-09;2!UBERON:0002107;7.90e-08;19!UBERON:0006925;7.90e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,2.17e-15,25;UBERON:0000015,2.17e-15,25;UBERON:0002423,2.17e-15,25;UBERON:0006235,2.17e-15,25;UBERON:0004161,2.17e-15,25;UBERON:0008835,1.88e-11,22;UBERON:0003894,1.88e-11,22;UBERON:0009854,5.74e-11,23;UBERON:0007499,4.11e-10,25;UBERON:0005172,6.04e-10,54;UBERON:0005173,6.04e-10,54;UBERON:0009856,9.83e-10,26;UBERON:0002417,6.33e-09,60;UBERON:0000916,6.33e-09,60;UBERON:0002294,6.77e-08,9;UBERON:0001173,6.77e-08,9;UBERON:0004912,6.77e-08,9;UBERON:0002107,8.38e-08,19;UBERON:0006925,8.38e-08,19;UBERON:0008836,8.38e-08,19;UBERON:0003929,4.03e-07,54;UBERON:0005177,6.27e-07,101 | |||
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| ||
|short_description=p8@UGT1A6 | |short_description=p8@UGT1A6 | ||
}} | }} |
Latest revision as of 23:30, 15 September 2015
Short description: | p8@UGT1A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_UGT1A6_5end |
Coexpression cluster: | C1504_signet_endometrial_bile_hepatoma_kidney_mesothelioma_liver |
Association with transcript: | 2bp_to_ENST00000305139, NM_001072, uc002vuv.3, uc010zmy.1_5end |
EntrezGene: | UGT1A6 |
HGNC: | 12538 |
UniProt: | P19224Q5DSZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.06e-12 | 12 |
epithelial cell of gall bladder | 4.02e-09 | 2 |
epithelial cell | 1.40e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 2.17e-15 | 25 |
anatomical boundary | 2.17e-15 | 25 |
hepatobiliary system | 2.17e-15 | 25 |
foregut-midgut junction | 2.17e-15 | 25 |
septum transversum | 2.17e-15 | 25 |
hepatic diverticulum | 1.88e-11 | 22 |
liver primordium | 1.88e-11 | 22 |
digestive tract diverticulum | 5.74e-11 | 23 |
epithelial sac | 4.11e-10 | 25 |
abdomen element | 6.04e-10 | 54 |
abdominal segment element | 6.04e-10 | 54 |
sac | 9.83e-10 | 26 |
abdominal segment of trunk | 6.33e-09 | 60 |
abdomen | 6.33e-09 | 60 |
biliary system | 6.77e-08 | 9 |
biliary tree | 6.77e-08 | 9 |
biliary bud | 6.77e-08 | 9 |
liver | 8.38e-08 | 19 |
digestive gland | 8.38e-08 | 19 |
liver bud | 8.38e-08 | 19 |
gut epithelium | 4.03e-07 | 54 |
trunk region element | 6.27e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 3.07e-16 | 1 |
carcinoma | 1.55e-13 | 106 |
cell type cancer | 6.36e-12 | 143 |
disease of anatomical entity | 7.80e-10 | 39 |
signet ring cell adenocarcinoma | 4.34e-09 | 2 |
cancer | 9.02e-07 | 235 |