FFCP PHASE1:Hg19::chr2:234600339..234600365,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54578 | |EntrezGene=54578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12538 | |HGNC=12538 | ||
|TSSclassifier=strong | |||
|UniProt=B5MCT4 | |UniProt=B5MCT4 | ||
|association_with_transcript=0bp_to_ENST00000446481,ENST00000480628_5end | |association_with_transcript=0bp_to_ENST00000446481,ENST00000480628_5end | ||
|cluster_id=chr2:234600339..234600365,+ | |||
|coexpression_cluster_id=C1898 | |||
|description=CAGE_peak_1_at_UGT1A6_5end | |description=CAGE_peak_1_at_UGT1A6_5end | ||
|id=chr2:234600339..234600365,+ | |id=chr2:234600339..234600365,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.35e-32!254;CL:0002076!1.29e-25!43;CL:0000223!1.48e-20!59;CL:0002251!1.75e-13!21;CL:0002368!1.07e-10!13;CL:0000076!2.35e-10!62;CL:0002159!1.00e-08!13 | |ontology_enrichment_celltype=CL:0000066!4.35e-32!254;CL:0002076!1.29e-25!43;CL:0000223!1.48e-20!59;CL:0002251!1.75e-13!21;CL:0002368!1.07e-10!13;CL:0000076!2.35e-10!62;CL:0002159!1.00e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.26e-21;42!CL:0002251;1.10e-14;20!CL:0002368;6.66e-13;13!CL:0002159;2.53e-11;14!CL:0000244;6.36e-09;4!CL:0000731;6.36e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.21e-30,253;CL:0002076,3.61e-27,42;CL:0000223,4.21e-22,58;CL:0002251,1.15e-14,20;CL:0002368,6.07e-13,13;CL:0000076,9.24e-13,63;CL:0002159,2.55e-11,14;CL:0000244,6.31e-09,4;CL:0000731,6.31e-09,4;CL:0002202,9.75e-07,9;CL:0002632,9.75e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;1.85e-12;58 | |||
|ontology_enrichment_disease=DOID:305!2.38e-17!106;DOID:1749!1.71e-14!14;DOID:0050687!1.01e-10!143;DOID:299!7.03e-09!25 | |ontology_enrichment_disease=DOID:305!2.38e-17!106;DOID:1749!1.71e-14!14;DOID:0050687!1.01e-10!143;DOID:299!7.03e-09!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;4.90e-18;14!DOID:299;9.15e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.51e-18,14;DOID:305,1.03e-14,106;DOID:0050687,1.26e-09,143;DOID:299,8.58e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.12e-20!169;UBERON:0000925!8.12e-20!169;UBERON:0006595!8.12e-20!169;UBERON:0001004!1.67e-18!72;UBERON:0001007!2.50e-14!155;UBERON:0001555!2.50e-14!155;UBERON:0007026!2.50e-14!155;UBERON:0000065!2.61e-14!53;UBERON:0004921!6.46e-13!129;UBERON:0004185!6.46e-13!129;UBERON:0000077!2.31e-12!130;UBERON:0000161!2.49e-11!35;UBERON:0005153!8.13e-10!37;UBERON:0001041!1.14e-09!98;UBERON:0005178!2.20e-09!34;UBERON:0002224!2.20e-09!34;UBERON:0005911!2.35e-09!82;UBERON:0000072!3.29e-09!46;UBERON:0008947!5.91e-09!38;UBERON:0003258!5.91e-09!38;UBERON:0005181!6.00e-09!35;UBERON:0000166!2.99e-08!21;UBERON:0000344!5.15e-08!12;UBERON:0000365!5.41e-08!5;UBERON:0000915!1.07e-07!52;UBERON:0003729!4.49e-07!5;UBERON:0005157!4.72e-07!51;UBERON:0000974!8.11e-07!10 | |ontology_enrichment_uberon=UBERON:0004119!8.12e-20!169;UBERON:0000925!8.12e-20!169;UBERON:0006595!8.12e-20!169;UBERON:0001004!1.67e-18!72;UBERON:0001007!2.50e-14!155;UBERON:0001555!2.50e-14!155;UBERON:0007026!2.50e-14!155;UBERON:0000065!2.61e-14!53;UBERON:0004921!6.46e-13!129;UBERON:0004185!6.46e-13!129;UBERON:0000077!2.31e-12!130;UBERON:0000161!2.49e-11!35;UBERON:0005153!8.13e-10!37;UBERON:0001041!1.14e-09!98;UBERON:0005178!2.20e-09!34;UBERON:0002224!2.20e-09!34;UBERON:0005911!2.35e-09!82;UBERON:0000072!3.29e-09!46;UBERON:0008947!5.91e-09!38;UBERON:0003258!5.91e-09!38;UBERON:0005181!6.00e-09!35;UBERON:0000166!2.99e-08!21;UBERON:0000344!5.15e-08!12;UBERON:0000365!5.41e-08!5;UBERON:0000915!1.07e-07!52;UBERON:0003729!4.49e-07!5;UBERON:0005157!4.72e-07!51;UBERON:0000974!8.11e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;9.00e-11;5!UBERON:0000344;1.15e-10;20!UBERON:0000974;2.02e-10;6!UBERON:0005911;1.80e-09;36!UBERON:0000486;3.05e-09;12!UBERON:0005178;6.41e-09;34!UBERON:0002224;6.41e-09;34!UBERON:0005910;7.33e-09;6!UBERON:0005181;2.69e-08;35!UBERON:0003343;7.03e-08;4!UBERON:0004785;7.03e-08;4!UBERON:0003729;1.11e-07;13!UBERON:0003350;1.18e-07;8!UBERON:0000065;4.95e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.46e-19,160;UBERON:0000925,3.46e-19,160;UBERON:0006595,3.46e-19,160;UBERON:0001007,4.03e-13,145;UBERON:0001555,4.03e-13,145;UBERON:0007026,4.03e-13,145;UBERON:0001004,1.09e-12,74;UBERON:0000365,8.93e-11,5;UBERON:0000344,1.16e-10,20;UBERON:0000065,1.21e-10,54;UBERON:0004921,2.79e-10,118;UBERON:0000161,4.44e-10,36;UBERON:0005911,6.92e-10,82;UBERON:0005178,9.82e-10,34;UBERON:0002224,9.82e-10,34;UBERON:0005181,2.45e-09,35;UBERON:0005910,7.28e-09,6;UBERON:0005153,2.43e-08,37;UBERON:0003102,4.42e-08,99;UBERON:0003343,6.79e-08,4;UBERON:0004785,6.79e-08,4;UBERON:0003729,1.10e-07,13;UBERON:0003350,1.22e-07,8;UBERON:0005157,1.30e-07,47;UBERON:0000915,1.98e-07,52;UBERON:0001008,2.31e-07,48;UBERON:0001041,6.08e-07,87;UBERON:0005177,7.47e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,2.75826367343678,6.6265302131215,12.5716363456708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,5.82872461268068,5.56176664176644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54141078213801,0,0,0,0,0,1.12135520028461,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25173876959253,7.36414525595254,2.58124135850103,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,33.9448090378993,0,25.4620662148011,15.7362454560667,9.4497234066933,10.4624943029138,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,13.1227367581488,5.03946384596579,4.53680311175637,5.46306988487375,0.581267877027924,1.53353071666084,0,0,0,0,0,0.126995788584338,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80863626235752,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,8.32177197552485,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0859449591622,38.0962293576241,4.51196845785892,0,0,0,0.902399225814824,1.00119938235739,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.309123034943167,0,0.082509499920588,10.9110452219273,12.3511446746939,0,0,0,0,0,0,0,0,0,60.163709191396,26.9066094311149,62.7854545473354,27.3126008309985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.62221127255121,11.3951386841084,6.53345909167936,0.753150406214233,49.9386232298627,32.0095803768489,60.7499310345246,99.2405088894065,0,0,0,0,0,0,0,0,0,0,73.7571050102905,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,0,0.23874448473769,6.83018765915069,1.22864280839693,0,0,0,0,0,1.59398390600856,0,0,0,0,0,0,42.607039572795,0,6.01724774385295,0,0,0,0,0,1.5625665665114,4.63537999979837,0,182.638484498227,0,6.61885508950222,0,0,0,0,0,0,0,0,0,0,15.0577643820892,1.15425387755696,0.113942055847001,0.23056390438806,0,0,0,5.31266041730801,0.533034776018635,0,0.941881538370149,0,0,0,0,0,0,0,46.6845831335162,2.26164914294305,0,0,0.0884575645033392,1.22206028986725,0,0.123563938946503,0,0.067401132980677,0,0,0,26.6103881747642,0,0.789168805698781,0,0,0,0,0,0,0,0,0,31.3070500632772,0,0,94.2686863126313,41.4401823322716,1.04836000945218,0,0.387025325156341,0.511625219603299,0.574808199372465,18.5249021492881,0,1.35588444468319,0,0,0,41.4568931397782,4.56905275433742,0,8.19219399286734,5.18725501754782,0,0,0,0,37.9467395733041,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,1.08270229666224,0,0,0,0,0,0,2.0247650239635,17.0236430002749,0,44.6128134507024,8.27459926641581,1.15400093896996,0,0.179287339332845,56.2311528145975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,317.166760042502,1.60181118851542,0.314408610199332,2.48543433208317,0,0,0,7.66009509324218,0,0,0,0,8.00975890876195,0,0,0,0,0,0,0,3.37447101497688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26705925512272,0.463044948647668,0,3.22359913946677,0.926404341482917,9.86778223104182,0,0,3.7167336943676,9.48093618775403,0,0,0,0,0,0.163565394255844,0,8.60205180638018,0,0,0,0,0,0,3.91662621614445,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8498955957492,294.098520305917,1.46742878817343,9.47310462432773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,228.311458191957,0,0,0,0.455324382702595,0.266107110487916,0,128.958983096939,0,0,0,0.444925607568277,2.43328587836593,0,0,0,3.67076905071656,1.9110067515482,0.0714765441766563,0,0,0,0,0.414432328326074,0.3414369541879,0,0.860454717640555,0,0,0.423387050190929,0.4582137370881,0.93061915699296,0,13.6463626793307,0.294450700845729,73.760344614273,0,0,0,1.45713297917742,0,0,0,20.4432408490518,0,0,0.0771741581079447,0,0,2.20633489578515,0,0,0,0,0,0,0,0,81.4205960041799,2.82315897372553,0.0802413666891683,1.46067277649303,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,6.18378547512845,1.42838658878244,0.581300188524055,0.372448285775147,0,0,0,9.14410341167238,3.08009970976753,12.5274818607133,10.9734974250795,3.65926392200615,64.5527920085028,0,0,0,0,0.366724332548599,0.813792356631477,1.99727032255654,0.201273793591026,0 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| ||
|short_description=p1@UGT1A6 | |short_description=p1@UGT1A6 | ||
}} | }} |
Latest revision as of 23:28, 15 September 2015
Short description: | p1@UGT1A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UGT1A6_5end |
Coexpression cluster: | C1898_oral_lung_pharyngeal_bronchial_pleomorphic_squamous_Urothelial |
Association with transcript: | 0bp_to_ENST00000446481, ENST00000480628_5end |
EntrezGene: | UGT1A6 |
HGNC: | 12538 |
UniProt: | B5MCT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.21e-30 | 253 |
endo-epithelial cell | 3.61e-27 | 42 |
endodermal cell | 4.21e-22 | 58 |
epithelial cell of alimentary canal | 1.15e-14 | 20 |
respiratory epithelial cell | 6.07e-13 | 13 |
squamous epithelial cell | 9.24e-13 | 63 |
general ecto-epithelial cell | 2.55e-11 | 14 |
transitional epithelial cell | 6.31e-09 | 4 |
urothelial cell | 6.31e-09 | 4 |
epithelial cell of tracheobronchial tree | 9.75e-07 | 9 |
epithelial cell of lower respiratory tract | 9.75e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.46e-19 | 160 |
endoderm | 3.46e-19 | 160 |
presumptive endoderm | 3.46e-19 | 160 |
digestive system | 4.03e-13 | 145 |
digestive tract | 4.03e-13 | 145 |
primitive gut | 4.03e-13 | 145 |
respiratory system | 1.09e-12 | 74 |
urothelium | 8.93e-11 | 5 |
mucosa | 1.16e-10 | 20 |
respiratory tract | 1.21e-10 | 54 |
subdivision of digestive tract | 2.79e-10 | 118 |
orifice | 4.44e-10 | 36 |
endo-epithelium | 6.92e-10 | 82 |
thoracic cavity element | 9.82e-10 | 34 |
thoracic cavity | 9.82e-10 | 34 |
thoracic segment organ | 2.45e-09 | 35 |
transitional epithelium | 7.28e-09 | 6 |
epithelial bud | 2.43e-08 | 37 |
surface structure | 4.42e-08 | 99 |
mucosa of oral region | 6.79e-08 | 4 |
respiratory system mucosa | 6.79e-08 | 4 |
mouth mucosa | 1.10e-07 | 13 |
epithelium of mucosa | 1.22e-07 | 8 |
epithelial fold | 1.30e-07 | 47 |
thoracic segment of trunk | 1.98e-07 | 52 |
renal system | 2.31e-07 | 48 |
foregut | 6.08e-07 | 87 |
trunk region element | 7.47e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.51e-18 | 14 |
carcinoma | 1.03e-14 | 106 |
cell type cancer | 1.26e-09 | 143 |
adenocarcinoma | 8.58e-08 | 25 |