FFCP PHASE1:Hg19::chr2:10091922..10091935,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29841 | |EntrezGene=29841 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17923 | |HGNC=17923 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000472167_5end | |association_with_transcript=11bp_to_ENST00000472167_5end | ||
|cluster_id=chr2:10091922..10091935,+ | |||
|description=CAGE_peak_3_at_GRHL1_5end | |description=CAGE_peak_3_at_GRHL1_5end | ||
|id=chr2:10091922..10091935,+ | |id=chr2:10091922..10091935,+ | ||
|ontology_enrichment_celltype=CL:0002076!4.83e-18!43;CL:0000223!2.97e-17!59;CL:0002368!2.39e-08!13;CL:0002251!2.79e-08!21;CL:0000066!2.02e-07!254 | |ontology_enrichment_celltype=CL:0002076!4.83e-18!43;CL:0000223!2.97e-17!59;CL:0002368!2.39e-08!13;CL:0002251!2.79e-08!21;CL:0000066!2.02e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002541;7.12e-18;3!CL:0002537;1.63e-10;5!CL:0000349;3.70e-10;19!CL:0000039;1.94e-08;7!CL:0000586;1.94e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,7.13e-18,3;CL:0002537,1.13e-10,5;CL:0000349,3.07e-10,19;CL:0000039,2.02e-08,7;CL:0000586,2.02e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0005795;3.13e-09;10!UBERON:0009847;2.64e-08;3!UBERON:0003353;2.64e-08;3!UBERON:0009143;1.86e-07;1!UBERON:0003124;2.10e-07;1!UBERON:0006298;4.18e-07;1!UBERON:0008425;4.18e-07;1!UBERON:0005754;7.72e-07;1 | |||
|ontology_enrichment_disease=DOID:305!8.07e-10!106;DOID:0050687!7.96e-07!143 | |ontology_enrichment_disease=DOID:305!8.07e-10!106;DOID:0050687!7.96e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1799;1.70e-07;1!DOID:10165;1.70e-07;1!DOID:1798;1.70e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.65e-07,1;DOID:10165,1.65e-07,1;DOID:1798,1.65e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.26e-17!169;UBERON:0000925!9.26e-17!169;UBERON:0006595!9.26e-17!169;UBERON:0001007!1.80e-13!155;UBERON:0001555!1.80e-13!155;UBERON:0007026!1.80e-13!155;UBERON:0001004!3.96e-13!72;UBERON:0000077!7.35e-13!130;UBERON:0000161!8.22e-13!35;UBERON:0004921!5.14e-12!129;UBERON:0004185!5.14e-12!129;UBERON:0000166!2.97e-09!21;UBERON:0005911!6.28e-09!82;UBERON:0001041!6.34e-09!98;UBERON:0000065!7.07e-09!53;UBERON:0000464!6.88e-08!104;UBERON:0000466!8.14e-08!126;UBERON:0005178!3.22e-07!34;UBERON:0002224!3.22e-07!34;UBERON:0005181!6.58e-07!35 | |ontology_enrichment_uberon=UBERON:0004119!9.26e-17!169;UBERON:0000925!9.26e-17!169;UBERON:0006595!9.26e-17!169;UBERON:0001007!1.80e-13!155;UBERON:0001555!1.80e-13!155;UBERON:0007026!1.80e-13!155;UBERON:0001004!3.96e-13!72;UBERON:0000077!7.35e-13!130;UBERON:0000161!8.22e-13!35;UBERON:0004921!5.14e-12!129;UBERON:0004185!5.14e-12!129;UBERON:0000166!2.97e-09!21;UBERON:0005911!6.28e-09!82;UBERON:0001041!6.34e-09!98;UBERON:0000065!7.07e-09!53;UBERON:0000464!6.88e-08!104;UBERON:0000466!8.14e-08!126;UBERON:0005178!3.22e-07!34;UBERON:0002224!3.22e-07!34;UBERON:0005181!6.58e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;9.18e-20;10!UBERON:0000158;9.18e-20;10!UBERON:0003124;7.12e-18;3!UBERON:0000920;7.12e-18;3!UBERON:0000478;9.18e-11;24!UBERON:0001044;2.53e-09;6!UBERON:0003293;2.53e-09;6!UBERON:0003294;2.53e-09;6!UBERON:0010047;2.53e-09;6!UBERON:0003408;2.53e-09;6!UBERON:0000167;2.53e-09;6!UBERON:0004175;4.36e-09;21!UBERON:0001723;8.74e-09;3!UBERON:0001033;8.74e-09;3!UBERON:0006947;1.78e-08;3!UBERON:0004054;1.78e-08;3!UBERON:0000305;1.20e-07;7!UBERON:0002372;2.10e-07;1!UBERON:0001961;2.10e-07;1!UBERON:0001744;2.10e-07;1!UBERON:0001042;2.10e-07;1!UBERON:0001735;2.10e-07;1!UBERON:0001000;4.18e-07;1!UBERON:0001736;4.18e-07;1!UBERON:0005352;4.18e-07;1!UBERON:0000165;5.16e-07;28!UBERON:0001041;6.74e-07;14!UBERON:0005795;7.72e-07;1!UBERON:0000998;7.72e-07;1!UBERON:0006868;7.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.33e-19,14;UBERON:0000158,3.33e-19,14;UBERON:0000920,7.13e-18,3;UBERON:0003124,1.50e-13,7;UBERON:0000478,7.61e-11,24;UBERON:0004175,3.06e-10,25;UBERON:0001044,2.64e-09,6;UBERON:0003293,2.64e-09,6;UBERON:0003294,2.64e-09,6;UBERON:0010047,2.64e-09,6;UBERON:0000167,2.64e-09,6;UBERON:0000166,4.65e-09,22;UBERON:0000161,4.80e-09,36;UBERON:0001723,9.82e-09,3;UBERON:0001033,9.82e-09,3;UBERON:0010056,9.82e-09,3;UBERON:0005795,9.92e-09,22;UBERON:0006947,1.68e-08,3;UBERON:0004054,1.68e-08,3;UBERON:0000305,9.30e-08,7;UBERON:0002372,2.10e-07,1;UBERON:0001961,2.10e-07,1;UBERON:0001744,2.10e-07,1;UBERON:0001735,2.10e-07,1;UBERON:0001000,3.60e-07,1;UBERON:0005352,3.60e-07,1;UBERON:0001736,4.06e-07,1;UBERON:0006298,4.06e-07,1;UBERON:0004871,7.66e-07,8;UBERON:0000998,8.18e-07,1;UBERON:0006868,8.18e-07,1;UBERON:0000165,9.91e-07,29;UBERON:0000930,9.91e-07,29 | |||
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| ||
|short_description=p3@GRHL1 | |short_description=p3@GRHL1 | ||
}} | }} |
Latest revision as of 22:53, 15 September 2015
Short description: | p3@GRHL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GRHL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000472167_5end |
EntrezGene: | GRHL1 |
HGNC: | 17923 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 7.13e-18 | 3 |
amnion mesenchymal stem cell | 1.13e-10 | 5 |
extraembryonic cell | 3.07e-10 | 19 |
germ line cell | 2.02e-08 | 7 |
germ cell | 2.02e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.33e-19 | 14 |
membranous layer | 3.33e-19 | 14 |
egg chorion | 7.13e-18 | 3 |
chorion | 1.50e-13 | 7 |
extraembryonic structure | 7.61e-11 | 24 |
internal genitalia | 3.06e-10 | 25 |
saliva-secreting gland | 2.64e-09 | 6 |
gland of oral region | 2.64e-09 | 6 |
gland of foregut | 2.64e-09 | 6 |
oral gland | 2.64e-09 | 6 |
oral cavity | 2.64e-09 | 6 |
oral opening | 4.65e-09 | 22 |
orifice | 4.80e-09 | 36 |
tongue | 9.82e-09 | 3 |
gustatory system | 9.82e-09 | 3 |
future tongue | 9.82e-09 | 3 |
embryonic uterus | 9.92e-09 | 22 |
male genital duct | 1.68e-08 | 3 |
internal male genitalia | 1.68e-08 | 3 |
amnion | 9.30e-08 | 7 |
tonsil | 2.10e-07 | 1 |
mucosa-associated lymphoid tissue | 2.10e-07 | 1 |
lymphoid tissue | 2.10e-07 | 1 |
tonsillar ring | 2.10e-07 | 1 |
vas deferens | 3.60e-07 | 1 |
spermatic cord | 3.60e-07 | 1 |
submandibular gland | 4.06e-07 | 1 |
submandibular gland primordium | 4.06e-07 | 1 |
somatic layer of lateral plate mesoderm | 7.66e-07 | 8 |
seminal vesicle | 8.18e-07 | 1 |
seminal fluid secreting gland | 8.18e-07 | 1 |
mouth | 9.91e-07 | 29 |
stomodeum | 9.91e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.65e-07 | 1 |
endocrine pancreas cancer | 1.65e-07 | 1 |
pancreatic endocrine carcinoma | 1.65e-07 | 1 |