FFCP PHASE1:Hg19::chr1:110198761..110198791,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:110198761..110198791,+ to FFCP PHASE1:Hg19::chr1:110198761..110198791,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2948 | |EntrezGene=2948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4636 | |HGNC=4636 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000326729_5end | |||
|cluster_id=chr1:110198761..110198791,+ | |||
|coexpression_cluster_id=C3846 | |||
|description=CAGE_peak_4_at_GSTM4_5end | |||
|id=chr1:110198761..110198791,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.03e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.71e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;6.97e-09;31!UBERON:0004161;4.07e-08;11!UBERON:0009497;1.11e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!8.24e-09!129;UBERON:0004185!8.24e-09!129;UBERON:0001017!8.80e-08!82;UBERON:0007023!1.00e-07!115;UBERON:0005743!1.04e-07!86;UBERON:0001049!1.82e-07!57;UBERON:0005068!1.82e-07!57;UBERON:0006241!1.82e-07!57;UBERON:0007135!1.82e-07!57;UBERON:0000073!1.83e-07!94;UBERON:0001016!1.83e-07!94;UBERON:0000955!3.10e-07!69;UBERON:0006238!3.10e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.39e-07;19!UBERON:0006925;5.39e-07;19!UBERON:0000160;6.68e-07;17!UBERON:0002423;8.36e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.25e-11,223;UBERON:0004921,6.99e-09,118;UBERON:0009856,5.92e-08,26;UBERON:0007499,1.67e-07,25;UBERON:0009497,3.16e-07,25;UBERON:0000015,3.16e-07,25;UBERON:0002423,3.16e-07,25;UBERON:0006235,3.16e-07,25;UBERON:0004161,3.16e-07,25;UBERON:0005172,3.94e-07,54;UBERON:0005173,3.94e-07,54;UBERON:0002107,4.10e-07,19;UBERON:0006925,4.10e-07,19;UBERON:0008836,4.10e-07,19;UBERON:0009854,4.89e-07,23;UBERON:0000160,5.05e-07,17;UBERON:0007023,6.02e-07,114 | |||
|phase1_expression=0.54503513781167,2.14100523890983,0.704772020479856,0,0.893922188854576,0,0,1.26343974685366,1.04474251279935,1.96587149201207,1.39560233594486,0.218441372130172,0.791300934685361,0.495065411840187,0.331397375727916,0,1.20538905604795,0.730310090387373,0,1.35433163884467,0.612002073732759,0.940364164434263,0.572471974262113,0.684372125364421,0.627713197974014,0.61130724598361,0.656804715599566,0.550975469195755,0.786728553697808,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0.154934401160603,0.568676929949686,0.880801318004542,0.553995408531877,0.200544447470142,0.217010870715852,0.223915474239924,0.647787332037959,1.80302897343931,0.145398238779565,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0,0.512321413058201,0.47296445977717,0,0,0,0.188242339542605,0,0.449446968890169,0,0.641858054152187,0,0.329851300186716,0,0,0.290209238628584,0.56738522469114,0,0,0,0.217188844705117,0,0,0.632924774881769,0.845021145247767,0.637812899895131,0.419317291016752,0.561643155732475,0.300353785683013,0.48217676009124,1.14005097496499,0.39783335439818,0,0,0,0.889509253863555,0,0,0,0,0.954053754535364,0.569212969109448,0,0,0,0,0.526768169550154,0.196709770113833,0.786021525498329,0,1.17030546773475,0.32592226663359,0.473447805734733,0,0.445641827540694,0.883817722424512,0.221533894583621,0.270803863765016,0.128091319725675,0.520237390239513,0.328875809207352,0.552700035571697,0.869409257205157,0.14828656316206,0,0,0.679856056185397,0.383220493601921,0.68725489096526,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0,0.534880391567015,0.579297615531196,2.43806866313962,4.02420515822182,1.15076305659177,0,1.00267582127178,1.01392563272577,0.795285947051099,0,0.189069634328136,0.665188192387692,0.527008714158756,1.5062593682237,0,0,1.9472843619281,3.48259474598534,3.72282289452822,0,0,0,0.993812036833525,0,1.04142150482278,1.13061588384802,0,0.825354125820202,0.835979866147242,0,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0,0.17859945656816,0.898117490504679,0.225222960966644,0,0,0.732806975721629,0,0,0,0.496971951695318,1.2663051166458,0.529636723252875,0,0,0.560677600142307,0,0.24666754841716,0.622422070799533,0.269421344139376,0,0.605429710579726,0,0.70296429550139,0.312160076830321,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0.408308342509787,0,0.516628905878827,0,0,3.64064544775211,4.31170885089743,0.673344455816265,0.750711119231785,0.277064115484183,0,0.30648779579902,0.751190294532984,0.113432183160021,0.717558542755448,0.213557388818567,0.211931901159562,0.600182192168805,1.03052529238439,1.28820270022815,0.37223371266318,0.843881661206331,0.389748020644795,0.252433774244115,0.552299391853796,0.646584227275248,0.710019185033229,0.403008392910561,1.01736355386293,0,0,0,0.609868530647977,0.530119073285941,0.580969714347592,0.932949495138334,1.00928340350251,0,0,0.643240938192885,2.76269842704961,0.464367928031979,1.44375896333917,1.41968160047813,1.18009283054671,1.68707720918437,0.772057809126758,2.17879444092406,1.66089433377768,2.15730093056263,0.98110732562673,1.53898862778556,0.738155454624648,0,1.6462960453256,0,15.2106041786197,2.94848165003288,7.08947888017685,0,2.95172252503473,0.514703430895577,0.329250856225877,0,0,0,0.325808305310325,1.03993478527958,0,0.34779121492523,0.234817388471643,4.76409277611544,9.25971025153221,9.70296176396451,0,0.858486162094873,0.492434012174795,3.27605971194933,2.37809859661965,0,0.335964256397719,0,0.358234090811393,0,0.383382679165211,0,0.44024217006613,0.207328115540772,2.16179930125442,1.51490920111656,0.825472625798197,1.90994212779139,0,1.71072446022705,0.102827492703324,2.10240140490742,0.285826432630578,0.448524337381443,0.87192013766656,0.51336800074665,0.775630294546667,3.57656445851882,0,0.797814349754612,0,0.771622122786426,0,0,0.57191197463259,0.542621605391443,0,0.325736184293735,0.710783897485092,0,1.80863626235752,1.74306691720059,0.699810938274399,0,0.502257091432126,2.10833939483032,1.19812427745791,1.14861935834114,2.85273810081437,0,0.821905290201534,0.537182889719687,1.00876629594175,0,0.215627574859517,0.641715181398742,1.52456774533478,1.30139853857622,0.773288812777695,1.00509759200609,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0.178428988797162,0.473107245101804,0.117141414992713,0.300946099727719,0,2.0694614258501,0.664225598535437,0.737476674166813,0.781952530212746,1.56640925970192,0.686286847621712,0,0.215714200818617,0.106727557803444,0.303127571446259,0,1.5119514666484,1.48864684691266,0.460385919864187,0.561320188866147,0.384417447767103,1.02341449813341,0.64341568457443,2.96836132889982,0.154209693802656,0.532685175939381,0,0,0.697262270759755,1.93375119346596,1.20303882181971,0.276242966807689,1.14814448164607,0.546273504020151,1.44236856455367,0,0.15403067420883,0.784349769176855,1.46139224653261,0.105551628892876,0,0.680374821106063,0,0,0.812839312631559,1.50506932156456,0.254876273045038,0,0.671624264166535,0,0,0.256450125116389,0.328014645699706,0.650756789328606,4.6368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| ||
|short_description=p4@GSTM4 | |||
}} | }} |
Latest revision as of 22:39, 15 September 2015
Short description: | p4@GSTM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GSTM4_5end |
Coexpression cluster: | C3846_astrocytoma_alveolar_mesothelioma_small_mucinous_Pericytes_Mesenchymal |
Association with transcript: | 17bp_to_ENST00000326729_5end |
EntrezGene: | GSTM4 |
HGNC: | 4636 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.71e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.25e-11 | 223 |
subdivision of digestive tract | 6.99e-09 | 118 |
sac | 5.92e-08 | 26 |
epithelial sac | 1.67e-07 | 25 |
epithelium of foregut-midgut junction | 3.16e-07 | 25 |
anatomical boundary | 3.16e-07 | 25 |
hepatobiliary system | 3.16e-07 | 25 |
foregut-midgut junction | 3.16e-07 | 25 |
septum transversum | 3.16e-07 | 25 |
abdomen element | 3.94e-07 | 54 |
abdominal segment element | 3.94e-07 | 54 |
liver | 4.10e-07 | 19 |
digestive gland | 4.10e-07 | 19 |
liver bud | 4.10e-07 | 19 |
digestive tract diverticulum | 4.89e-07 | 23 |
intestine | 5.05e-07 | 17 |
adult organism | 6.02e-07 | 114 |