FFCP PHASE1:Hg19::chr14:73525265..73525286,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58517 | |EntrezGene=58517 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23244 | |HGNC=23244 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000526754_5end | |association_with_transcript=8bp_to_ENST00000526754_5end | ||
|cluster_id=chr14:73525265..73525286,+ | |||
|coexpression_cluster_id=C1724 | |coexpression_cluster_id=C1724 | ||
|description=CAGE_peak_2_at_RBM25_5end | |description=CAGE_peak_2_at_RBM25_5end | ||
|id=chr14:73525265..73525286,+ | |id=chr14:73525265..73525286,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.72e-22!172;CL:0000566!2.72e-22!172;CL:0002032!3.43e-21!165;CL:0000837!3.43e-21!165;CL:0000988!4.03e-20!182;CL:0000738!3.33e-15!140;CL:0000763!3.13e-13!112;CL:0000049!3.13e-13!112;CL:0002031!4.39e-13!124;CL:0002087!9.07e-13!119;CL:0000860!5.55e-10!45;CL:0002057!5.20e-09!42;CL:0000542!5.49e-08!53;CL:0000051!5.49e-08!53;CL:0000838!1.49e-07!52;CL:0000766!5.13e-07!76;CL:0000557!8.19e-07!71 | |ontology_enrichment_celltype=CL:0000037!2.72e-22!172;CL:0000566!2.72e-22!172;CL:0002032!3.43e-21!165;CL:0000837!3.43e-21!165;CL:0000988!4.03e-20!182;CL:0000738!3.33e-15!140;CL:0000763!3.13e-13!112;CL:0000049!3.13e-13!112;CL:0002031!4.39e-13!124;CL:0002087!9.07e-13!119;CL:0000860!5.55e-10!45;CL:0002057!5.20e-09!42;CL:0000542!5.49e-08!53;CL:0000051!5.49e-08!53;CL:0000838!1.49e-07!52;CL:0000766!5.13e-07!76;CL:0000557!8.19e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.15e-09;33!CL:0002057;1.15e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.25e-21,168;CL:0002032,1.53e-20,161;CL:0000837,1.53e-20,161;CL:0000988,4.63e-20,177;CL:0000738,1.29e-14,136;CL:0000763,1.15e-12,108;CL:0000049,1.15e-12,108;CL:0002031,1.61e-12,120;CL:0002087,3.31e-12,115;CL:0000860,5.20e-09,42;CL:0002057,5.20e-09,42;CL:0000542,5.49e-08,53;CL:0000051,5.49e-08,53;CL:0000838,1.49e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;5.75e-07;42 | |||
|ontology_enrichment_disease=DOID:162!3.57e-22!235;DOID:14566!7.10e-21!239;DOID:0050686!4.13e-13!137;DOID:0050687!1.11e-11!143;DOID:2531!1.48e-11!51;DOID:0060083!1.48e-11!51;DOID:305!2.90e-10!106;DOID:1240!5.64e-10!39;DOID:8692!4.12e-08!31 | |ontology_enrichment_disease=DOID:162!3.57e-22!235;DOID:14566!7.10e-21!239;DOID:0050686!4.13e-13!137;DOID:0050687!1.11e-11!143;DOID:2531!1.48e-11!51;DOID:0060083!1.48e-11!51;DOID:305!2.90e-10!106;DOID:1240!5.64e-10!39;DOID:8692!4.12e-08!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;5.91e-08;39!DOID:8692;1.02e-07;31!DOID:2531;2.53e-07;51!DOID:0060083;2.53e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.57e-22,235;DOID:14566,7.10e-21,239;DOID:0050686,4.13e-13,137;DOID:0050687,1.11e-11,143;DOID:2531,1.48e-11,51;DOID:0060083,1.48e-11,51;DOID:305,2.90e-10,106;DOID:1240,5.64e-10,39;DOID:8692,4.12e-08,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@RBM25 | |short_description=p2@RBM25 | ||
}} | }} |
Latest revision as of 22:33, 15 September 2015
Short description: | p2@RBM25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RBM25_5end |
Coexpression cluster: | C1724_Mast_medulloblastoma_small_non_cerebellum_hepatoblastoma_merkel |
Association with transcript: | 8bp_to_ENST00000526754_5end |
EntrezGene: | RBM25 |
HGNC: | 23244 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.25e-21 | 168 |
hematopoietic oligopotent progenitor cell | 1.53e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.53e-20 | 161 |
hematopoietic cell | 4.63e-20 | 177 |
leukocyte | 1.29e-14 | 136 |
myeloid cell | 1.15e-12 | 108 |
common myeloid progenitor | 1.15e-12 | 108 |
hematopoietic lineage restricted progenitor cell | 1.61e-12 | 120 |
nongranular leukocyte | 3.31e-12 | 115 |
classical monocyte | 5.20e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.20e-09 | 42 |
lymphocyte | 5.49e-08 | 53 |
common lymphoid progenitor | 5.49e-08 | 53 |
lymphoid lineage restricted progenitor cell | 1.49e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.57e-22 | 235 |
disease of cellular proliferation | 7.10e-21 | 239 |
organ system cancer | 4.13e-13 | 137 |
cell type cancer | 1.11e-11 | 143 |
hematologic cancer | 1.48e-11 | 51 |
immune system cancer | 1.48e-11 | 51 |
carcinoma | 2.90e-10 | 106 |
leukemia | 5.64e-10 | 39 |
myeloid leukemia | 4.12e-08 | 31 |