FFCP PHASE1:Hg19::chr8:121137476..121137487,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7373 | |EntrezGene=7373 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2191 | |HGNC=2191 | ||
|TSSclassifier=strong | |||
|UniProt=Q05707 | |UniProt=Q05707 | ||
|association_with_transcript=93bp_to_ENST00000432943_5end | |association_with_transcript=93bp_to_ENST00000432943_5end | ||
|cluster_id=chr8:121137476..121137487,+ | |||
|coexpression_cluster_id=C2006 | |||
|description=CAGE_peak_4_at_COL14A1_5end | |description=CAGE_peak_4_at_COL14A1_5end | ||
|id=chr8:121137476..121137487,+ | |id=chr8:121137476..121137487,+ | ||
|ontology_enrichment_celltype=CL:0000153!1.69e-07!9;CL:0000447!1.69e-07!9;CL:0000499!3.88e-07!27 | |ontology_enrichment_celltype=CL:0000153!1.69e-07!9;CL:0000447!1.69e-07!9;CL:0000499!3.88e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000153;3.38e-11;9!CL:0000447;3.38e-11;9!CL:0000499;3.72e-10;28!CL:0002622;1.37e-09;3!CL:0000138;3.27e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.56e-11,9;CL:0000447,2.56e-11,9;CL:0000499,2.63e-10,28;CL:0002622,1.17e-09,3;CL:0000058,2.90e-08,6;CL:0000138,2.90e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.14e-12;4!UBERON:0007284;2.14e-12;4!UBERON:0006603;3.78e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;2.05e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.99e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.12e-15!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.18e-11;49!UBERON:0003978;4.11e-10;3!UBERON:0000946;4.11e-10;3!UBERON:0002133;3.14e-07;2!UBERON:0000341;3.76e-07;2!UBERON:0003101;3.92e-07;22!UBERON:0000079;3.92e-07;22!UBERON:0002081;6.53e-07;2!UBERON:0000077;7.24e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001046,8.55e-11,19;UBERON:0003978,4.65e-10,3;UBERON:0009751,4.65e-10,3;UBERON:0000946,4.65e-10,3;UBERON:0002523,4.65e-10,3;UBERON:0005983,4.65e-10,3;UBERON:0002165,4.65e-10,3;UBERON:0002062,4.65e-10,3;UBERON:0007280,4.65e-10,3;UBERON:0000162,2.60e-09,14;UBERON:0001353,2.60e-09,14;UBERON:0000163,2.60e-09,14;UBERON:0006866,2.60e-09,14;UBERON:0000164,2.60e-09,14;UBERON:0000931,2.60e-09,14;UBERON:0004122,1.28e-08,15;UBERON:0000161,2.66e-07,36;UBERON:0002133,3.44e-07,2;UBERON:0003101,3.71e-07,22;UBERON:0000079,3.71e-07,22;UBERON:0000341,4.00e-07,2;UBERON:0004797,5.50e-07,7;UBERON:0002081,7.04e-07,2;UBERON:0010227,7.04e-07,2;UBERON:0007023,7.25e-07,114;UBERON:0003064,7.75e-07,28 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,1.8564952944007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,4.3372698286148,4.01070328508712,1.59331170856906,4.7717156823066,0.973269740605272,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14734648299525,0,0,0,0.24666754841716,0.933633106199299,0,0,0,0,0.234321431833797,0,0,0.298897361103602,0,0,0,0,0,0.619954687054593,1.18800285728205,0.494533858557114,0,0,0,0.250237039743928,0,0,0.30648779579902,0.751190294532984,0,0,0.427114777637135,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,2.10139873864455,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.57191197463259,0.542621605391443,0,0,0.710783897485092,0,0,0,0,0,0,0,0,4.59447743336456,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.96306386750624,0,0.542530047399471,0,0,0,0.117141414992713,0.902838299183157,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0,0,0,3.90369123759663,1.45672934405374,6.68734516293063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0.082509499920588,0,0,0,0.48335359146061,0,0,0,0.107420244868274,0,0,1.51354460599453,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0.274537029736055,0.353437207037059,0,0,0,0,0.243713489631284,0,0.136499911407986,1.41405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68886108238131,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,0,0,0,7.37217556528958,1.38141957765574,0,0,0,0,0,0,0,2.56472854656027,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,9.23403102045565,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.067401132980677,4.81546588379273,0,0,0,0,1.18375320854817,3.62972148145992,0,1.20054501294127,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,2.62090002363045,0,0,0,0,0.969890164884194,0,4.29363407483012,0,0,0.0633107959558787,0,0,4.0556069000477,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,8.09918963689537,5.27068975226872,2.15361907373044,0,0.429226048136571,0,1.14211903227435,0,0,0,0,0,0.196854963029498,0,0,0,0,0.137539436597234,0,0,0,0,0,0.472834243795189,0.367182116944987,0,0,0,3.57347663186684,0,0,0.542999601753713,0,0,0,0,0,0,0.732761168390412,1.32506888912221,0,0.13223260174269,0,0,0.320362237703084,3.14408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0.149254802886874,0,0,1.51522404220071,2.51567901752575,0,0.457680136793847,0.453692771289717,0.310874401165561,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,2.40376993627955,0.336749488765919,7.57109389371906,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,5.03909199940024,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,3.47347824872506,0,0,0.535701835878287,0.336283722218824,0,0,1.24183318227694,0,0,0,0,0,0,3.76766845682467,0,0,4.56579360254748,0,0,0.285906176706625,0,0,0.695433089210318,5.61197955311177,0,0,0,0,0.118332000730565,0.170426809518315,0.423387050190929,0,0,0,0,0,0,0,0.307988420568741,5.799072156691,8.74279787506451,0,0,0.237840181555137,0,0,0,0.231522474323834,1.31135736302374,0,2.94177986104687,0,0.196308467114945,0,2.113278637917,0,0.563903507879121,1.54698931136585,0,0,0,0,1.46067277649303,0,0,2.36657343289777,0.0679914901909147,0,1.0580536810308,1.48798007266701,1.84870251452567,0.432626562123789,0,0,0.253397002022874,0,0,0,0,0.909344378618873,0,0,0,2.13233981900981,6.90386851244847,0.0645889098360061,0.124149428591716,0,0.954707374172474,3.43599221228973,2.39488422686657,2.73786640868225,0.80822463617505,0.430333232356058,7.31852784401229,0,0,5.7921684686082,0,2.34640942403454,6.11207220914332,6.10344267473608,1.99727032255654,0.805095174364105,0 | |phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,1.8564952944007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,4.3372698286148,4.01070328508712,1.59331170856906,4.7717156823066,0.973269740605272,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14734648299525,0,0,0,0.24666754841716,0.933633106199299,0,0,0,0,0.234321431833797,0,0,0.298897361103602,0,0,0,0,0,0.619954687054593,1.18800285728205,0.494533858557114,0,0,0,0.250237039743928,0,0,0.30648779579902,0.751190294532984,0,0,0.427114777637135,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,2.10139873864455,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.57191197463259,0.542621605391443,0,0,0.710783897485092,0,0,0,0,0,0,0,0,4.59447743336456,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.96306386750624,0,0.542530047399471,0,0,0,0.117141414992713,0.902838299183157,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0,0,0,3.90369123759663,1.45672934405374,6.68734516293063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0.082509499920588,0,0,0,0.48335359146061,0,0,0,0.107420244868274,0,0,1.51354460599453,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0.274537029736055,0.353437207037059,0,0,0,0,0.243713489631284,0,0.136499911407986,1.41405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68886108238131,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,0,0,0,7.37217556528958,1.38141957765574,0,0,0,0,0,0,0,2.56472854656027,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,9.23403102045565,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.067401132980677,4.81546588379273,0,0,0,0,1.18375320854817,3.62972148145992,0,1.20054501294127,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,2.62090002363045,0,0,0,0,0.969890164884194,0,4.29363407483012,0,0,0.0633107959558787,0,0,4.0556069000477,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,8.09918963689537,5.27068975226872,2.15361907373044,0,0.429226048136571,0,1.14211903227435,0,0,0,0,0,0.196854963029498,0,0,0,0,0.137539436597234,0,0,0,0,0,0.472834243795189,0.367182116944987,0,0,0,3.57347663186684,0,0,0.542999601753713,0,0,0,0,0,0,0.732761168390412,1.32506888912221,0,0.13223260174269,0,0,0.320362237703084,3.14408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0.149254802886874,0,0,1.51522404220071,2.51567901752575,0,0.457680136793847,0.453692771289717,0.310874401165561,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,2.40376993627955,0.336749488765919,7.57109389371906,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,5.03909199940024,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,3.47347824872506,0,0,0.535701835878287,0.336283722218824,0,0,1.24183318227694,0,0,0,0,0,0,3.76766845682467,0,0,4.56579360254748,0,0,0.285906176706625,0,0,0.695433089210318,5.61197955311177,0,0,0,0,0.118332000730565,0.170426809518315,0.423387050190929,0,0,0,0,0,0,0,0.307988420568741,5.799072156691,8.74279787506451,0,0,0.237840181555137,0,0,0,0.231522474323834,1.31135736302374,0,2.94177986104687,0,0.196308467114945,0,2.113278637917,0,0.563903507879121,1.54698931136585,0,0,0,0,1.46067277649303,0,0,2.36657343289777,0.0679914901909147,0,1.0580536810308,1.48798007266701,1.84870251452567,0.432626562123789,0,0,0.253397002022874,0,0,0,0,0.909344378618873,0,0,0,2.13233981900981,6.90386851244847,0.0645889098360061,0.124149428591716,0,0.954707374172474,3.43599221228973,2.39488422686657,2.73786640868225,0.80822463617505,0.430333232356058,7.31852784401229,0,0,5.7921684686082,0,2.34640942403454,6.11207220914332,6.10344267473608,1.99727032255654,0.805095174364105,0 | ||
|short_description=p4@COL14A1 | |short_description=p4@COL14A1 | ||
}} | }} |
Latest revision as of 22:20, 15 September 2015
Short description: | p4@COL14A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_COL14A1_5end |
Coexpression cluster: | C2006_sacrococcigeal_mesodermal_trachea_aorta_rectum_throat_diaphragm |
Association with transcript: | 93bp_to_ENST00000432943_5end |
EntrezGene: | COL14A1 |
HGNC: | 2191 |
UniProt: | Q05707 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.56e-11 | 9 |
carbohydrate secreting cell | 2.56e-11 | 9 |
stromal cell | 2.63e-10 | 28 |
prostate stromal cell | 1.17e-09 | 3 |
chondroblast | 2.90e-08 | 6 |
chondrocyte | 2.90e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
hindgut | 8.55e-11 | 19 |
valve | 4.65e-10 | 3 |
cardiac mesenchyme | 4.65e-10 | 3 |
cardial valve | 4.65e-10 | 3 |
tunica intima | 4.65e-10 | 3 |
heart layer | 4.65e-10 | 3 |
endocardium | 4.65e-10 | 3 |
endocardial cushion | 4.65e-10 | 3 |
presumptive endocardium | 4.65e-10 | 3 |
cloaca | 2.60e-09 | 14 |
anal region | 2.60e-09 | 14 |
embryonic cloaca | 2.60e-09 | 14 |
terminal part of digestive tract | 2.60e-09 | 14 |
primitive urogenital sinus | 2.60e-09 | 14 |
proctodeum | 2.60e-09 | 14 |
genitourinary system | 1.28e-08 | 15 |
orifice | 2.66e-07 | 36 |
atrioventricular valve | 3.44e-07 | 2 |
male organism | 3.71e-07 | 22 |
male reproductive system | 3.71e-07 | 22 |
throat | 4.00e-07 | 2 |
blood vessel layer | 5.50e-07 | 7 |
cardiac atrium | 7.04e-07 | 2 |
future cardiac atrium | 7.04e-07 | 2 |
adult organism | 7.25e-07 | 114 |
intermediate mesoderm | 7.75e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.99e-07 | 2 |