FFCP PHASE1:Hg19::chr1:223900193..223900249,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=824 | |EntrezGene=824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1479 | |HGNC=1479 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000366869_5end | |association_with_transcript=-4bp_to_ENST00000366869_5end | ||
|cluster_id=chr1:223900193..223900249,+ | |||
|coexpression_cluster_id=C2570 | |||
|description=CAGE_peak_1_at_CAPN2_5end | |description=CAGE_peak_1_at_CAPN2_5end | ||
|id=chr1:223900193..223900249,+ | |id=chr1:223900193..223900249,+ | ||
|ontology_enrichment_celltype=CL:0000548!1.04e-19!679;CL:0000004!1.04e-19!679;CL:0000255!1.04e-19!679;CL:0000012!1.51e-18!682;CL:0002371!1.72e-18!591;CL:0000144!3.25e-18!625;CL:0000222!8.96e-17!119;CL:0000003!1.45e-15!722;CL:0000055!5.22e-14!180;CL:0000220!6.79e-14!246;CL:0002321!3.99e-13!248;CL:0002057!7.87e-12!42;CL:0000057!2.62e-11!75;CL:0000359!5.55e-11!32;CL:0000680!1.15e-10!57;CL:0000056!1.15e-10!57;CL:0000355!1.15e-10!57;CL:0000192!2.76e-10!42;CL:0000514!2.76e-10!42;CL:0000063!3.39e-10!578;CL:0000187!4.86e-10!54;CL:0000860!5.81e-10!45;CL:0000183!1.06e-09!59;CL:0000076!6.91e-09!62;CL:0000066!2.63e-07!254;CL:0000213!7.72e-07!57;CL:0000215!7.72e-07!57;CL:0000393!9.03e-07!60;CL:0000211!9.03e-07!60 | |ontology_enrichment_celltype=CL:0000548!1.04e-19!679;CL:0000004!1.04e-19!679;CL:0000255!1.04e-19!679;CL:0000012!1.51e-18!682;CL:0002371!1.72e-18!591;CL:0000144!3.25e-18!625;CL:0000222!8.96e-17!119;CL:0000003!1.45e-15!722;CL:0000055!5.22e-14!180;CL:0000220!6.79e-14!246;CL:0002321!3.99e-13!248;CL:0002057!7.87e-12!42;CL:0000057!2.62e-11!75;CL:0000359!5.55e-11!32;CL:0000680!1.15e-10!57;CL:0000056!1.15e-10!57;CL:0000355!1.15e-10!57;CL:0000192!2.76e-10!42;CL:0000514!2.76e-10!42;CL:0000063!3.39e-10!578;CL:0000187!4.86e-10!54;CL:0000860!5.81e-10!45;CL:0000183!1.06e-09!59;CL:0000076!6.91e-09!62;CL:0000066!2.63e-07!254;CL:0000213!7.72e-07!57;CL:0000215!7.72e-07!57;CL:0000393!9.03e-07!60;CL:0000211!9.03e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.62e-11;33!CL:0002057;1.62e-11;33!CL:0000359;2.54e-10;32!CL:0000192;1.05e-07;43!CL:0000473;5.16e-07;39!CL:0000234;5.16e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.09e-17,121;CL:0002321,1.60e-13,250;CL:0000860,7.86e-12,42;CL:0002057,7.86e-12,42;CL:0000057,3.36e-11,76;CL:0000359,5.55e-11,32;CL:0000680,6.60e-11,58;CL:0000056,6.60e-11,58;CL:0000355,6.60e-11,58;CL:0000192,1.58e-10,43;CL:0000514,1.58e-10,43;CL:0000187,2.80e-10,55;CL:0000076,4.22e-09,63;CL:0000473,6.29e-09,48;CL:0000234,6.29e-09,48;CL:0000066,3.73e-07,253;CL:0000213,5.14e-07,58;CL:0000215,5.14e-07,58;CL:0000393,5.57e-07,61;CL:0000211,5.57e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;6.66e-09;42!CL:0000514;1.05e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.03e-17!448;UBERON:0004120!1.03e-17!448;UBERON:0006603!1.03e-17!448;UBERON:0000914!3.40e-15!83;UBERON:0002329!3.40e-15!83;UBERON:0003077!3.40e-15!83;UBERON:0003059!3.40e-15!83;UBERON:0007282!3.40e-15!83;UBERON:0009618!3.40e-15!83;UBERON:0007285!3.40e-15!83;UBERON:0002049!9.01e-13!79;UBERON:0007798!9.01e-13!79;UBERON:0001637!1.04e-12!42;UBERON:0003509!1.04e-12!42;UBERON:0004572!1.04e-12!42;UBERON:0001981!1.06e-12!60;UBERON:0007500!1.06e-12!60;UBERON:0004537!1.06e-12!60;UBERON:0006965!1.06e-12!60;UBERON:0000486!1.31e-12!82;UBERON:0004290!3.22e-12!70;UBERON:0000480!3.74e-12!626;UBERON:0000055!5.53e-12!69;UBERON:0000467!8.33e-12!625;UBERON:0005256!2.62e-11!143;UBERON:0004872!4.08e-11!84;UBERON:0002100!4.36e-11!216;UBERON:0003081!7.61e-11!216;UBERON:0002204!1.27e-10!167;UBERON:0000923!2.90e-10!604;UBERON:0005291!2.90e-10!604;UBERON:0006598!2.90e-10!604;UBERON:0002532!2.90e-10!604;UBERON:0002050!3.68e-10!605;UBERON:0005423!3.68e-10!605;UBERON:0000468!7.06e-10!659;UBERON:0000490!1.22e-09!138;UBERON:0001134!2.19e-09!61;UBERON:0002036!2.19e-09!61;UBERON:0003082!2.19e-09!61;UBERON:0004573!2.21e-09!33;UBERON:0004571!2.21e-09!33;UBERON:0003102!5.36e-09!95;UBERON:0002385!8.08e-09!63;UBERON:0001015!8.08e-09!63;UBERON:0000383!8.08e-09!63;UBERON:0003914!9.74e-09!118;UBERON:0000922!1.21e-08!612;UBERON:0004535!2.53e-08!110;UBERON:0001009!6.14e-08!113;UBERON:0003104!1.74e-07!238;UBERON:0009142!1.74e-07!238;UBERON:0000487!8.36e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.58e-09;42!UBERON:0003509;4.58e-09;42!UBERON:0004572;4.58e-09;42!UBERON:0004573;1.28e-08;33!UBERON:0004571;1.28e-08;33!UBERON:0007500;2.99e-08;56!UBERON:0001981;2.99e-08;56!UBERON:0004537;2.99e-08;56!UBERON:0003914;5.87e-07;74!UBERON:0000487;8.70e-07;22 | |||
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| ||
|short_description=p1@CAPN2 | |short_description=p1@CAPN2 | ||
}} | }} |
Latest revision as of 22:16, 15 September 2015
Short description: | p1@CAPN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CAPN2_5end |
Coexpression cluster: | C2570_mesenchymal_leiomyoma_Fibroblast_CD14_Mesothelial_Gingival_meningioma |
Association with transcript: | -4bp_to_ENST00000366869_5end |
EntrezGene: | CAPN2 |
HGNC: | 1479 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.09e-17 | 121 |
embryonic cell | 1.60e-13 | 250 |
classical monocyte | 7.86e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.86e-12 | 42 |
fibroblast | 3.36e-11 | 76 |
vascular associated smooth muscle cell | 5.55e-11 | 32 |
muscle precursor cell | 6.60e-11 | 58 |
myoblast | 6.60e-11 | 58 |
multi-potent skeletal muscle stem cell | 6.60e-11 | 58 |
smooth muscle cell | 1.58e-10 | 43 |
smooth muscle myoblast | 1.58e-10 | 43 |
muscle cell | 2.80e-10 | 55 |
squamous epithelial cell | 4.22e-09 | 63 |
defensive cell | 6.29e-09 | 48 |
phagocyte | 6.29e-09 | 48 |
epithelial cell | 3.73e-07 | 253 |
lining cell | 5.14e-07 | 58 |
barrier cell | 5.14e-07 | 58 |
electrically responsive cell | 5.57e-07 | 61 |
electrically active cell | 5.57e-07 | 61 |