FFCP PHASE1:Hg19::chr22:51135914..51135945,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85358 | |EntrezGene=85358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=14294 | |HGNC=14294 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_uc003bnf.1_5end | |association_with_transcript=-5bp_to_uc003bnf.1_5end | ||
|cluster_id=chr22:51135914..51135945,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_1_at_SHANK3_5end | |description=CAGE_peak_1_at_SHANK3_5end | ||
|id=chr22:51135914..51135945,+ | |id=chr22:51135914..51135945,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.92e-12;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.98e-30!365;UBERON:0000073!2.61e-30!94;UBERON:0001016!2.61e-30!94;UBERON:0000955!9.92e-30!69;UBERON:0006238!9.92e-30!69;UBERON:0005743!1.24e-29!86;UBERON:0001017!1.93e-29!82;UBERON:0001049!1.87e-28!57;UBERON:0005068!1.87e-28!57;UBERON:0006241!1.87e-28!57;UBERON:0007135!1.87e-28!57;UBERON:0002616!1.69e-27!59;UBERON:0002346!6.44e-27!90;UBERON:0003075!1.35e-26!86;UBERON:0007284!1.35e-26!86;UBERON:0000924!1.47e-26!173;UBERON:0006601!1.47e-26!173;UBERON:0000033!4.23e-26!123;UBERON:0004121!5.36e-26!169;UBERON:0000153!2.67e-24!129;UBERON:0007811!2.67e-24!129;UBERON:0000481!6.11e-22!347;UBERON:0002780!1.15e-21!41;UBERON:0001890!1.15e-21!41;UBERON:0006240!1.15e-21!41;UBERON:0003080!1.40e-20!42;UBERON:0003056!2.07e-20!61;UBERON:0000119!9.03e-20!312;UBERON:0000483!1.03e-19!309;UBERON:0001893!4.91e-19!34;UBERON:0002020!1.11e-18!34;UBERON:0003528!1.11e-18!34;UBERON:0002791!2.41e-18!33;UBERON:0001869!8.05e-18!32;UBERON:0002619!1.28e-14!22;UBERON:0000064!2.32e-14!219;UBERON:0000956!3.96e-14!25;UBERON:0000203!3.96e-14!25;UBERON:0007023!6.32e-14!115;UBERON:0001950!3.35e-13!20;UBERON:0000062!7.87e-13!511;UBERON:0000477!1.12e-12!286;UBERON:0000025!4.75e-12!194;UBERON:0004111!8.69e-12!241;UBERON:0000468!3.14e-09!659;UBERON:0003076!5.15e-09!15;UBERON:0003057!5.15e-09!15;UBERON:0004732!3.89e-08!13;UBERON:0000922!4.27e-08!612;UBERON:0000467!6.17e-08!625;UBERON:0000480!8.96e-08!626;UBERON:0004733!1.12e-07!12;UBERON:0002028!1.12e-07!12;UBERON:0007277!1.12e-07!12;UBERON:0002050!1.56e-07!605;UBERON:0005423!1.56e-07!605;UBERON:0000923!1.80e-07!604;UBERON:0005291!1.80e-07!604;UBERON:0006598!1.80e-07!604;UBERON:0002532!1.80e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.75e-27;22!UBERON:0001893;1.98e-26;34!UBERON:0003528;1.31e-25;34!UBERON:0002020;1.31e-25;34!UBERON:0001869;1.59e-25;32!UBERON:0002791;3.82e-25;32!UBERON:0000073;7.12e-25;53!UBERON:0002616;7.12e-25;53!UBERON:0002780;1.73e-24;41!UBERON:0001890;1.73e-24;41!UBERON:0001950;7.26e-24;20!UBERON:0000956;9.40e-23;25!UBERON:0000203;9.40e-23;25!UBERON:0000955;2.27e-17;68!UBERON:0001017;8.60e-17;75!UBERON:0001016;6.26e-16;83!UBERON:0000200;3.82e-10;6!UBERON:0004732;5.52e-10;13!UBERON:0000125;3.34e-09;9!UBERON:0002308;3.34e-09;9!UBERON:0004733;4.07e-09;12!UBERON:0002028;4.07e-09;12!UBERON:0001872;1.69e-08;5!UBERON:0002298;1.81e-08;6!UBERON:0002021;4.04e-08;5!UBERON:0002420;3.13e-07;9!UBERON:0007245;3.13e-07;9!UBERON:0010009;3.13e-07;9!UBERON:0010011;3.13e-07;9!UBERON:0000454;3.13e-07;9!UBERON:0011216;3.32e-07;132!UBERON:0009663;5.09e-07;7 | |||
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| ||
|short_description=p1@SHANK3 | |short_description=p1@SHANK3 | ||
}} | }} |
Latest revision as of 22:09, 15 September 2015
Short description: | p1@SHANK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SHANK3_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -5bp_to_uc003bnf.1_5end |
EntrezGene: | SHANK3 |
HGNC: | 14294 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data