FFCP PHASE1:Hg19::chr17:48046543..48046575,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1748 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2917 | |||
|TSSclassifier=strong | |||
|UniProt=Q92988 | |||
|association_with_transcript=0bp_to_NM_138281,uc002ipv.2_5end | |||
|cluster_id=chr17:48046543..48046575,+ | |||
|description=CAGE_peak_2_at_DLX4_5end | |||
|id=chr17:48046543..48046575,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.77e-10!254;CL:0000039!3.05e-08!7;CL:0000586!3.05e-08!7;CL:0002251!8.05e-08!21;CL:0000223!3.80e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002563;3.01e-07;4!CL:0000039;3.05e-07;7!CL:0000586;3.05e-07;7!CL:0000123;3.56e-07;2!CL:0000242;3.56e-07;2!CL:0002253;6.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.92e-07,4;CL:0000039,2.98e-07,7;CL:0000586,2.98e-07,7;CL:0000242,4.14e-07,2;CL:0002253,6.41e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.88e-46!235;DOID:14566!1.14e-44!239;DOID:0050687!7.92e-41!143;DOID:305!3.21e-36!106;DOID:0050686!2.42e-20!137;DOID:1749!2.86e-10!14;DOID:1325!4.02e-08!7;DOID:3904!4.02e-08!7;DOID:3095!1.04e-07!22;DOID:2994!1.04e-07!22;DOID:3119!1.09e-07!14;DOID:0050615!4.09e-07!16;DOID:170!5.73e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:1325;7.14e-13;7!DOID:3904;7.14e-13;7!DOID:3905;3.71e-10;9!DOID:0050615;1.93e-09;16!DOID:1324;9.78e-08;15!DOID:3095;2.40e-07;22!DOID:2994;2.40e-07;22!DOID:3119;2.73e-07;14!DOID:305;6.35e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.78e-22,143;DOID:162,2.68e-21,235;DOID:14566,1.40e-20,239;DOID:305,2.63e-15,106;DOID:1325,7.16e-13,7;DOID:3904,7.16e-13,7;DOID:0050686,3.67e-12,137;DOID:3905,3.98e-10,9;DOID:0050615,1.83e-09,16;DOID:1324,9.62e-08,15;DOID:3095,2.47e-07,22;DOID:2994,2.47e-07,22;DOID:3119,2.61e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.83e-10!155;UBERON:0001555!1.83e-10!155;UBERON:0007026!1.83e-10!155;UBERON:0004921!3.48e-10!129;UBERON:0004185!3.48e-10!129;UBERON:0004119!2.63e-09!169;UBERON:0000925!2.63e-09!169;UBERON:0006595!2.63e-09!169;UBERON:0000077!7.01e-09!130;UBERON:0001737!1.20e-08!9;UBERON:0001041!3.71e-08!98;UBERON:0000160!4.24e-08!27;UBERON:0005409!4.56e-08!35;UBERON:0001045!5.98e-08!11;UBERON:0000344!9.43e-08!12;UBERON:0000072!1.03e-07!46;UBERON:0001264!2.63e-07!10;UBERON:0003922!2.63e-07!10;UBERON:0003923!2.63e-07!10;UBERON:0003924!2.63e-07!10;UBERON:0003921!2.63e-07!10;UBERON:0001557!6.74e-07!19;UBERON:0008947!7.07e-07!38;UBERON:0003258!7.07e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;1.01e-09;10!UBERON:0001242;3.01e-07;4!UBERON:0001262;3.01e-07;4!UBERON:0004786;3.01e-07;4!UBERON:0004808;3.01e-07;4!UBERON:0001277;3.01e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,8.60e-10,10;UBERON:0001242,2.92e-07,4;UBERON:0001262,2.92e-07,4;UBERON:0004786,2.92e-07,4;UBERON:0004808,2.92e-07,4;UBERON:0001277,2.92e-07,4 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.15877215168659,0,0.973269740605272,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0.530119073285941,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0.709840800239063,0.842923450390509,0.482022059766964,1.10293972732394,0.871517776369625,0.237270619111097,0.269662616320329,0.98110732562673,0.38474715694639,0,0,0,0,0,0,0,0,4.5505722260952,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.448340575974109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.19695633243976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,9.88950220038109,6.35323149388527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.658589785919804,0,0,0,0.670302275535787,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,6.30262019652092,0,1.47024129588619,0,0,0,1.4348364545594,0.798317485731266,0,0.423347165447766,0,0,0.228234679033192,0.156679895773023,7.51903431270201,0,0.642352300414798,0,0,3.09154810280188,2.76516687877612,0.671028323677248,0.834245708559542,1.17232857241224,0,0,0,0.99921590399346,0,0,0,0.485442086998054,0,1.13654458722565,0.71623345421307,0,0,0,0,0,0.659215496907038,4.43363357068786,0,0.276283915531148,0,2.45444838005172,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,3.23601999985924,0,0.227586896570999,2.2882828526349,1.65471377237555,12.7555048099342,8.16492917473112,1.56262495439963,1.77148277162768,0,0,0,0,0,3.2681539055697,2.64905114129346,0,0,19.8284957773732,10.3221291071238,10.7560898202788,3.50901275705111,0.641183153813036,2.13213910407454,0,0.784901281975124,0,0.225595660617181,0.392125068635479,0.335643173951685,0,0,0,2.12202650606892,5.37141671448975,3.46221823587346,0,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0,0.586993856796269,1.21390189767046,0,0,0,0,0.450970258243478,0.414752765588989,3.98792323624311,1.65495977937749,3.7671950208867,7.16834578637753,0.284609546029793,0,0.347119476670262,0.783939179315021,0.609414446062818,0,0,0.387025325156341,1.0232504392066,0.410577285266046,0.0969890164884194,1.94163478721301,0,0,0,0,0,0.0801588202515337,0,5.99428828746391,0.576361668616424,0.80175617316141,0,0,0.124252535565433,3.06402245001834,0.271808412147228,0.104602846312333,0.305994652908965,0,0,0,0,0,0.262887354279314,0,0,0,1.19807400299395,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0.0984274815147488,0,0,0,0.160753148465019,0.275078873194468,0,0.2249738915515,0,0,0,0,0,0,0,4.79787993298613,0,0,0,0,0,0,0,0.164185041498678,0,0.453248366080503,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,3.61224421375539,0,0,0,0,0,0,2.35192679391592,0,0,0.856396000634902,0.235265819698172,7.02502358710322,5.07223600137888,0,0,0,0,0.251567901752575,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73357847366573,0.857766365499703,0,0,0,0.97894681802587,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0,0,1.31043939538565,0,0,0,4.16097745807149,0,0,0,0,0,7.16208479300449,0.970423302570136,0,0,1.3578602396322,0,0.123935764259002,5.58644917973244,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.88332946650923,1.29766695682514,0.550285795565037,0.231051332300676,0,2.0710797781803,5.17182177502314,0,1.41193548092464,0,9.69054769581263,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,3.16568239847317,2.29972369751271,0,0.336283722218824,0,0,2.04015451374069,0,0,0,0,2.83665218121524,0,0.078493092850514,0,0.560544326627578,0,0,0,0,1.58013611732727,0,0.173858272302579,0,0,0,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0.223710863595585,0,0,0,0,0,0,0,7.16222790580926,1.42704108933082,1.58124514854544,2.41869136839944,0.150962843566674,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,5.53517209677539,0,0,0,0,0,0.788857810965923,0,0,0,0,0.462175628631418,0,0.126166424835079,0,0,0.101988829741982,0.26721740526556,2.38926738790597,0.50141507858475,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0.435433495793923,1.71116650542641,0,0,0,0.0814032686109745,0.106727345877715,0,0.179650404213174,2.34640942403454,0,0,0,0,0 | |||
|short_description=p2@DLX4 | |||
}} |
Latest revision as of 22:02, 15 September 2015
Short description: | p2@DLX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DLX4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_138281, uc002ipv.2_5end |
EntrezGene: | DLX4 |
HGNC: | 2917 |
UniProt: | Q92988 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.92e-07 | 4 |
germ line cell | 2.98e-07 | 7 |
germ cell | 2.98e-07 | 7 |
Merkel cell | 4.14e-07 | 2 |
epithelial cell of large intestine | 6.41e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pancreas | 8.60e-10 | 10 |
intestinal mucosa | 2.92e-07 | 4 |
wall of intestine | 2.92e-07 | 4 |
gastrointestinal system mucosa | 2.92e-07 | 4 |
gastrointestinal system epithelium | 2.92e-07 | 4 |
intestinal epithelium | 2.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.78e-22 | 143 |
cancer | 2.68e-21 | 235 |
disease of cellular proliferation | 1.40e-20 | 239 |
carcinoma | 2.63e-15 | 106 |
bronchus cancer | 7.16e-13 | 7 |
bronchogenic carcinoma | 7.16e-13 | 7 |
organ system cancer | 3.67e-12 | 137 |
lung carcinoma | 3.98e-10 | 9 |
respiratory system cancer | 1.83e-09 | 16 |
lung cancer | 9.62e-08 | 15 |
germ cell and embryonal cancer | 2.47e-07 | 22 |
germ cell cancer | 2.47e-07 | 22 |
gastrointestinal system cancer | 2.61e-07 | 14 |