FFCP PHASE1:Hg19::chr4:144434712..144434722,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8467 | |EntrezGene=8467 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11101 | |HGNC=11101 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZI1 | |UniProt=F5GZI1 | ||
|association_with_transcript=92bp_to_ENST00000535006_5end | |association_with_transcript=92bp_to_ENST00000535006_5end | ||
|cluster_id=chr4:144434712..144434722,+ | |||
|description=CAGE_peak_9_at_SMARCA5_5end | |description=CAGE_peak_9_at_SMARCA5_5end | ||
|id=chr4:144434712..144434722,+ | |id=chr4:144434712..144434722,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.09e-21;5!CL:0000764;2.04e-14;2!CL:0000558;2.04e-14;2!CL:0000163;3.86e-12;9!CL:0002541;6.52e-10;3!CL:0000775;6.52e-10;3!CL:0000094;4.22e-08;8!CL:0000511;4.69e-08;1!CL:0002625;4.69e-08;1!CL:0000222;4.69e-08;1!CL:0000216;4.69e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.17e-21,5;CL:0002028,1.17e-21,5;CL:0000764,4.56e-15,2;CL:0000765,4.56e-15,2;CL:0000050,4.56e-15,2;CL:0000038,4.56e-15,2;CL:0000558,4.56e-15,2;CL:0000547,4.56e-15,2;CL:0000549,4.56e-15,2;CL:0000550,4.56e-15,2;CL:0000552,4.56e-15,2;CL:0000163,4.01e-12,9;CL:0000775,4.79e-10,3;CL:0002541,7.18e-10,3;CL:0000511,2.35e-08,1;CL:0002625,2.35e-08,1;CL:0000216,2.35e-08,1;CL:0000094,3.24e-08,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1036;4.22e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,7.06e-08,8 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.52e-10;3!UBERON:0000920;6.52e-10;3!UBERON:0002134;1.64e-08;1!UBERON:0005208;1.64e-08;1!UBERON:0004145;1.64e-08;1!UBERON:0005946;1.64e-08;1!UBERON:0005965;1.64e-08;1!UBERON:0002078;1.64e-08;1!UBERON:0001136;4.69e-08;1!UBERON:0001343;4.69e-08;1!UBERON:0004910;4.69e-08;1!UBERON:0004813;4.69e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,7.18e-10,3;UBERON:0002134,1.65e-08,1;UBERON:0005208,1.65e-08,1;UBERON:0005946,1.65e-08,1;UBERON:0005965,1.65e-08,1;UBERON:0002078,1.65e-08,1;UBERON:0001136,2.35e-08,1;UBERON:0001343,2.35e-08,1;UBERON:0004910,2.35e-08,1;UBERON:0005154,2.35e-08,1;UBERON:0005295,2.35e-08,1;UBERON:0004813,2.35e-08,1;UBERON:0005297,2.35e-08,1;UBERON:0005294,2.35e-08,1;UBERON:0010141,2.35e-08,1;UBERON:0005891,2.35e-08,1 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.547497700291537,0.125542639594803,0.0764134057479513,0.164201178899891,0,0,0,0.309632246632152,0,0,0,0.0774672005803016,0,0,0.553995408531877,0,0,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0,0.464858073811369,0.411167888021826,0.309706370895104,0.575384784644301,0,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0.918251677112708,0.641858054152187,0.639337125799041,0.329851300186716,0,0,0.580418477257168,0.56738522469114,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0.569212969109448,0,0.382273228125229,1.32171328579026,0,0.526768169550154,0.196709770113833,0.393010762749165,0,0.167186495390678,0.32592226663359,0,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0.25618263945135,0,0,0.276350017785848,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0.383220493601921,1.03088233644789,0,0.637130828648193,0,0,0,0.127986611154418,0,0,0,0.403213486449465,0.802320587350522,0.144824403882799,0,0.670700859703636,0.383587685530591,0,0,0.144846518960824,0,0,0.283604451492204,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0.56530794192401,0,0.275118041940067,0.208994966536811,0.516833518338658,0.35576626268671,0.66944122552934,0,0,0,0,0.81014194788176,0.714397826272638,0.44905874525234,0.450445921933289,0,0,0,1.31780417436063,0,0,0,0.379891534993739,0.264818361626438,0.573673241497627,0,0.560677600142307,0,0.24666754841716,0.622422070799533,0.404132016209064,0.490385709340376,0,0,0,0.624320153660641,0,0.149448680551801,0,0,0,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0.340296549480063,1.07633781413317,0,0.211931901159562,0.600182192168805,0.206105058476878,0,0,0.337552664482532,0.194874010322397,1.26216887122057,0.0920498986422993,0.646584227275248,0.355009592516614,0.302256294682921,0,0.193260853163297,0,0.286804595389004,0.121973706129595,0.397589304964456,0.348581828608555,0.725627385107593,0.252320850875628,1.82488679537915,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0.343135620597051,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0.380508304469197,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,1.97065295158377,1.23267807618516,0.829312462163088,1.15295962733569,1.13618190083742,0.063497894292169,0.763976851116555,0,0,0.308482478109971,0.300343057843917,0.285826432630578,0,0,0,0.129271715757778,0,0,0.797814349754612,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0.224170287987055,0.197030760201927,0.646882724578552,0.77005821767849,0.508189248444927,0,0,0,0,1.49801404789436,0,1.24324654030811,0.36807447515742,0,0,0.831883446123229,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,0,0.215714200818617,0.426910231213777,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0.164254312027618,0,0.116210378459959,0.725156697549733,0.200506470303285,0,0.114814448164607,0,0.655622074797121,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0,1.53481913652154,1.8300481571743,0.512900250232778,0.328014645699706,0.325378394664303,0.412164046590889,0.366277859273374,0.247528499761764,0,0,1.6068392984416,0.096670718292122,0,0,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0.267096106940212,0,0.192190067365106,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.818999468447914,0.424216295861138,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0.640276590135727,0.637705090915289,0,0.383010740264733,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0.556812347790485,0,0.540911356951966,0,0,0,0.439524537815682,0.121360521749513,0,0,0.23874448473769,0,0.921482106297696,0.994147647766298,0.140669416410513,0.111308705022906,0,0.211125408127993,0.19924798825107,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0.295547618953547,0,0,0.278847488557207,0.384751292518985,0,0.23056390438806,0.269272933229316,0,0.957003479195758,1.4655614944298,1.06606955203727,1.02193298195737,0,0.664846727600626,0.451191321234361,0.980312671588698,1.00692952185506,0.189753732724185,1.43042921082341,0.210998064528027,0.163232808159148,0,0,0,0.353830258013357,0,0,0.123563938946503,0,0.134802265961354,0,0.234264445725339,0,0,0,0,1.20990716048664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| ||
|short_description=p9@SMARCA5 | |short_description=p9@SMARCA5 | ||
}} | }} |
Latest revision as of 21:54, 15 September 2015
Short description: | p9@SMARCA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SMARCA5_5end |
Coexpression cluster: | NA |
Association with transcript: | 92bp_to_ENST00000535006_5end |
EntrezGene: | SMARCA5 |
HGNC: | 11101 |
UniProt: | F5GZI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.17e-21 | 5 |
basophil mast progenitor cell | 1.17e-21 | 5 |
erythroid lineage cell | 4.56e-15 | 2 |
erythroblast | 4.56e-15 | 2 |
megakaryocyte-erythroid progenitor cell | 4.56e-15 | 2 |
erythroid progenitor cell | 4.56e-15 | 2 |
reticulocyte | 4.56e-15 | 2 |
proerythroblast | 4.56e-15 | 2 |
basophilic erythroblast | 4.56e-15 | 2 |
polychromatophilic erythroblast | 4.56e-15 | 2 |
orthochromatic erythroblast | 4.56e-15 | 2 |
endocrine cell | 4.01e-12 | 9 |
neutrophil | 4.79e-10 | 3 |
chorionic membrane mesenchymal stem cell | 7.18e-10 | 3 |
androgen binding protein secreting cell | 2.35e-08 | 1 |
seminiferous tubule epithelial cell | 2.35e-08 | 1 |
Sertoli cell | 2.35e-08 | 1 |
granulocyte | 3.24e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 7.18e-10 | 3 |
tricuspid valve | 1.65e-08 | 1 |
right atrium valve | 1.65e-08 | 1 |
outflow tract of atrium | 1.65e-08 | 1 |
outflow part of right atrium | 1.65e-08 | 1 |
right cardiac atrium | 1.65e-08 | 1 |
mesothelium | 2.35e-08 | 1 |
seminiferous tubule of testis | 2.35e-08 | 1 |
epithelium of male gonad | 2.35e-08 | 1 |
epithelial cord | 2.35e-08 | 1 |
sex cord | 2.35e-08 | 1 |
seminiferous tubule epithelium | 2.35e-08 | 1 |
testis sex cord | 2.35e-08 | 1 |
genital ridge | 2.35e-08 | 1 |
primitive sex cord of indifferent gonad | 2.35e-08 | 1 |
coelomic epithelium | 2.35e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 7.06e-08 | 8 |