FFCP PHASE1:Hg19::chr12:103218428..103218438,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283432 | |EntrezGene=283432 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=27476 | |HGNC=27476 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-251bp_to_ENST00000547179,NR_033855_5end | |association_with_transcript=-251bp_to_ENST00000547179,NR_033855_5end | ||
|cluster_id=chr12:103218428..103218438,- | |||
|coexpression_cluster_id=C39 | |coexpression_cluster_id=C39 | ||
|description=CAGE_peak_1_at_LINC00485_5end | |description=CAGE_peak_1_at_LINC00485_5end | ||
|id=chr12:103218428..103218438,- | |id=chr12:103218428..103218438,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.42e-50;1!UBERON:0004874;5.12e-50;1!UBERON:0007297;4.32e-26;2!UBERON:0006603;2.19e-11;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!7.58e-27!11;UBERON:0001301!8.95e-20!1;UBERON:0002363!1.08e-19!1;UBERON:0007647!1.08e-19!1;UBERON:0010115!1.08e-19!1;UBERON:0000989!1.56e-19!1;UBERON:0008811!1.56e-19!1;UBERON:0006258!1.56e-19!1;UBERON:0005876!1.56e-19!1;UBERON:0004874!1.56e-19!1;UBERON:0007023!4.58e-15!115;UBERON:0003101!1.22e-13!22;UBERON:0000079!1.22e-13!22;UBERON:0002360!1.57e-10!2;UBERON:0000094!1.57e-10!2;UBERON:0007645!1.57e-10!2;UBERON:0000341!2.27e-10!2;UBERON:0002148!2.99e-10!2;UBERON:0009662!2.99e-10!2;UBERON:0000473!4.42e-10!8;UBERON:0002298!7.59e-10!8;UBERON:0003133!1.45e-09!48;UBERON:0005156!8.73e-08!59;UBERON:0000990!8.73e-08!59;UBERON:0006947!1.82e-07!3;UBERON:0004054!1.82e-07!3;UBERON:0000988!2.97e-07!3;UBERON:0006331!2.97e-07!3;UBERON:0001896!3.35e-07!3;UBERON:0005290!3.35e-07!3;UBERON:0010096!3.35e-07!3;UBERON:0004733!7.37e-07!12;UBERON:0002028!7.37e-07!12;UBERON:0007277!7.37e-07!12 | |ontology_enrichment_uberon=UBERON:0003135!7.58e-27!11;UBERON:0001301!8.95e-20!1;UBERON:0002363!1.08e-19!1;UBERON:0007647!1.08e-19!1;UBERON:0010115!1.08e-19!1;UBERON:0000989!1.56e-19!1;UBERON:0008811!1.56e-19!1;UBERON:0006258!1.56e-19!1;UBERON:0005876!1.56e-19!1;UBERON:0004874!1.56e-19!1;UBERON:0007023!4.58e-15!115;UBERON:0003101!1.22e-13!22;UBERON:0000079!1.22e-13!22;UBERON:0002360!1.57e-10!2;UBERON:0000094!1.57e-10!2;UBERON:0007645!1.57e-10!2;UBERON:0000341!2.27e-10!2;UBERON:0002148!2.99e-10!2;UBERON:0009662!2.99e-10!2;UBERON:0000473!4.42e-10!8;UBERON:0002298!7.59e-10!8;UBERON:0003133!1.45e-09!48;UBERON:0005156!8.73e-08!59;UBERON:0000990!8.73e-08!59;UBERON:0006947!1.82e-07!3;UBERON:0004054!1.82e-07!3;UBERON:0000988!2.97e-07!3;UBERON:0006331!2.97e-07!3;UBERON:0001896!3.35e-07!3;UBERON:0005290!3.35e-07!3;UBERON:0010096!3.35e-07!3;UBERON:0004733!7.37e-07!12;UBERON:0002028!7.37e-07!12;UBERON:0007277!7.37e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.46e-50;1!UBERON:0002363;2.42e-50;1!UBERON:0000989;5.12e-50;1!UBERON:0008811;5.12e-50;1!UBERON:0003135;5.35e-41;11!UBERON:0002360;5.56e-26;2!UBERON:0000094;5.56e-26;2!UBERON:0010743;5.56e-26;2!UBERON:0003101;4.58e-21;22!UBERON:0000079;4.58e-21;22!UBERON:0006947;6.76e-18;3!UBERON:0004054;6.76e-18;3!UBERON:0005904;8.82e-14;4!UBERON:0003133;1.00e-08;44!UBERON:0000473;1.75e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.46e-50,1;UBERON:0002363,2.42e-50,1;UBERON:0007645,2.42e-50,1;UBERON:0007647,2.42e-50,1;UBERON:0010115,2.42e-50,1;UBERON:0000989,6.58e-50,1;UBERON:0008811,6.58e-50,1;UBERON:0006258,6.58e-50,1;UBERON:0005876,6.58e-50,1;UBERON:0004874,6.58e-50,1;UBERON:0003135,5.35e-41,11;UBERON:0002360,5.56e-26,2;UBERON:0000094,5.56e-26,2;UBERON:0010743,5.56e-26,2;UBERON:0003101,4.58e-21,22;UBERON:0000079,4.58e-21,22;UBERON:0004876,5.14e-19,11;UBERON:0006947,6.76e-18,3;UBERON:0004054,6.76e-18,3;UBERON:0005904,8.82e-14,4;UBERON:0003133,3.53e-10,48;UBERON:0005156,1.93e-08,59;UBERON:0000990,1.93e-08,59;UBERON:0003064,3.92e-08,28;UBERON:0007023,8.86e-08,114;UBERON:0005103,1.49e-07,8;UBERON:0000083,1.49e-07,8;UBERON:0009201,1.49e-07,8;UBERON:0006553,1.49e-07,8;UBERON:0003074,1.49e-07,8;UBERON:0003060,1.49e-07,8;UBERON:0000473,1.69e-07,8;UBERON:0000080,7.48e-07,9;UBERON:0002120,7.48e-07,9;UBERON:0004875,7.48e-07,9;UBERON:0005721,7.48e-07,9;UBERON:0005754,7.48e-07,9;UBERON:0007297,7.48e-07,9 | |||
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|short_description=p1@LINC00485 | |short_description=p1@LINC00485 | ||
}} | }} |
Latest revision as of 21:41, 15 September 2015
Short description: | p1@LINC00485 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00485_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | -251bp_to_ENST00000547179, NR_033855_5end |
EntrezGene: | LINC00485 |
HGNC: | 27476 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data