FFCP PHASE1:Hg19::chr6:144509089..144509105,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8676 | |EntrezGene=8676 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11429 | |HGNC=11429 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=161bp_to_AJ012501_5end | |||
|cluster_id=chr6:144509089..144509105,+ | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_6_at_STX11_5end | |||
|id=chr6:144509089..144509105,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.77e-61!42;CL:0000860!4.24e-56!45;CL:0000766!2.30e-54!76;CL:0000738!2.81e-51!140;CL:0002009!2.03e-50!65;CL:0000557!4.50e-49!71;CL:0002194!1.19e-47!63;CL:0000576!1.19e-47!63;CL:0000040!1.19e-47!63;CL:0000559!1.19e-47!63;CL:0000988!8.87e-46!182;CL:0000037!1.57e-45!172;CL:0000566!1.57e-45!172;CL:0000839!1.76e-45!70;CL:0000763!5.25e-45!112;CL:0000049!5.25e-45!112;CL:0002032!1.33e-42!165;CL:0000837!1.33e-42!165;CL:0002087!7.46e-42!119;CL:0002031!1.51e-39!124;CL:0000134!1.04e-11!358;CL:0002320!4.49e-11!365;CL:0002393!4.85e-11!9;CL:0002397!4.85e-11!9;CL:0000219!9.95e-10!390;CL:0000080!4.12e-09!6;CL:0000094!5.00e-08!8;CL:0000048!6.48e-08!430;CL:0000723!1.60e-07!436;CL:0000081!2.18e-07!11;CL:0000034!5.08e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.72e-90;33!CL:0002057;1.72e-90;33!CL:0000473;2.99e-67;39!CL:0000234;2.99e-67;39!CL:0000576;7.09e-52;48!CL:0000766;5.85e-38;69!CL:0000763;1.71e-18;100!CL:0000094;2.48e-13;8!CL:0002087;4.25e-11;104!CL:0000775;3.36e-10;3!CL:0000081;9.84e-10;11!CL:0000738;1.99e-09;136!CL:0000988;3.19e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.28e-91,42;CL:0002057,1.28e-91,42;CL:0000473,1.77e-86,48;CL:0000234,1.77e-86,48;CL:0000766,5.70e-75,72;CL:0002194,2.92e-68,59;CL:0000576,2.92e-68,59;CL:0000040,2.92e-68,59;CL:0000559,2.92e-68,59;CL:0002009,6.55e-66,61;CL:0000839,1.21e-60,66;CL:0000557,1.10e-59,67;CL:0000763,1.32e-48,108;CL:0000049,1.32e-48,108;CL:0000738,1.16e-37,136;CL:0002087,4.94e-33,115;CL:0002031,1.80e-31,120;CL:0002032,4.47e-31,161;CL:0000837,4.47e-31,161;CL:0000037,1.40e-29,168;CL:0000988,7.88e-28,177;CL:0000094,2.82e-13,8;CL:0000134,2.34e-11,354;CL:0002320,4.93e-11,361;CL:0000775,3.36e-10,3;CL:0000219,6.80e-10,386;CL:0000081,1.08e-09,11;CL:0000048,1.70e-08,427;CL:0000723,2.65e-08,433;CL:0000034,4.71e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.25e-70;42!CL:0000049;9.92e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.00e-50!102;UBERON:0003061!1.00e-50!102;UBERON:0002193!1.89e-49!112;UBERON:0002371!1.32e-45!80;UBERON:0001474!3.00e-41!86;UBERON:0004765!3.55e-34!101;UBERON:0001434!3.55e-34!101;UBERON:0002405!3.67e-33!115;UBERON:0003081!1.09e-18!216;UBERON:0002204!1.18e-16!167;UBERON:0002384!1.08e-10!375;UBERON:0000178!3.80e-07!15;UBERON:0000179!3.80e-07!15;UBERON:0000463!3.80e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.66e-52,76;UBERON:0001474,4.72e-48,82;UBERON:0004765,2.05e-43,90;UBERON:0002390,7.68e-43,98;UBERON:0003061,7.68e-43,98;UBERON:0002405,7.06e-42,93;UBERON:0001434,1.20e-38,100;UBERON:0002193,1.81e-38,108;UBERON:0002204,2.59e-21,167;UBERON:0003081,2.91e-18,203;UBERON:0002384,1.36e-10,371;UBERON:0000926,5.43e-10,315;UBERON:0004120,5.43e-10,315;UBERON:0006603,5.43e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.157421562627358,0.393364276848904,0,1.08371286321253,0,0,0,0,0,0.293600439334847,0,1.20326668482085,1.30206522429511,0.223915474239924,0,0,0.872389432677388,0.755751887377619,0.727752183563449,1.85943229524548,1.6446715520873,2.47765096716083,4.60307827715441,3.33008918487831,3.07426898855161,2.41321976515633,0.645484683583826,4.06279459783025,2.07066573496865,1.09162460023138,0.898893937780338,2.75475503133812,0.962787081228281,0,2.63881040149373,4.78712778291916,5.54092175692502,3.77272010217159,1.70215567407342,4.35975574296902,5.27622197039161,4.69334626578181,3.25783267057675,4.23779651843358,2.57794345191295,3.48108626184973,0.845021145247767,0.850417199860174,0.209658645508376,0.786300418025466,0.750884464207532,0.32145117339416,0.285012743741249,0.99458338599545,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384273959177026,0.260118695119756,0.164437904603676,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.528290604079356,0.207328115540772,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,4.21667878966063,0,0,0,0,0,0,0.336255431980582,0.197030760201927,0.646882724578552,0.128343036279748,0,0,0,0,0,8.23907726341901,11.966458368161,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,1.58625035258854,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0.201799707191048,0.425846237690326,0.343505344755765,0.307240764308458,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0,0,0.988823245360557,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.370691816839509,0.104421949505455,0,0,0,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0.132864840313363,0.163565394255844,0,0,0,0.19998739585493,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p6@STX11 | |||
}} | }} |
Latest revision as of 21:23, 15 September 2015
Short description: | p6@STX11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_STX11_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 161bp_to_AJ012501_5end |
EntrezGene: | STX11 |
HGNC: | 11429 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.28e-91 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-91 | 42 |
defensive cell | 1.77e-86 | 48 |
phagocyte | 1.77e-86 | 48 |
myeloid leukocyte | 5.70e-75 | 72 |
monopoietic cell | 2.92e-68 | 59 |
monocyte | 2.92e-68 | 59 |
monoblast | 2.92e-68 | 59 |
promonocyte | 2.92e-68 | 59 |
macrophage dendritic cell progenitor | 6.55e-66 | 61 |
myeloid lineage restricted progenitor cell | 1.21e-60 | 66 |
granulocyte monocyte progenitor cell | 1.10e-59 | 67 |
myeloid cell | 1.32e-48 | 108 |
common myeloid progenitor | 1.32e-48 | 108 |
leukocyte | 1.16e-37 | 136 |
nongranular leukocyte | 4.94e-33 | 115 |
hematopoietic lineage restricted progenitor cell | 1.80e-31 | 120 |
hematopoietic oligopotent progenitor cell | 4.47e-31 | 161 |
hematopoietic multipotent progenitor cell | 4.47e-31 | 161 |
hematopoietic stem cell | 1.40e-29 | 168 |
hematopoietic cell | 7.88e-28 | 177 |
granulocyte | 2.82e-13 | 8 |
mesenchymal cell | 2.34e-11 | 354 |
connective tissue cell | 4.93e-11 | 361 |
neutrophil | 3.36e-10 | 3 |
motile cell | 6.80e-10 | 386 |
blood cell | 1.08e-09 | 11 |
multi fate stem cell | 1.70e-08 | 427 |
somatic stem cell | 2.65e-08 | 433 |
stem cell | 4.71e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.66e-52 | 76 |
bone element | 4.72e-48 | 82 |
skeletal element | 2.05e-43 | 90 |
hematopoietic system | 7.68e-43 | 98 |
blood island | 7.68e-43 | 98 |
immune system | 7.06e-42 | 93 |
skeletal system | 1.20e-38 | 100 |
hemolymphoid system | 1.81e-38 | 108 |
musculoskeletal system | 2.59e-21 | 167 |
lateral plate mesoderm | 2.91e-18 | 203 |
connective tissue | 1.36e-10 | 371 |
mesoderm | 5.43e-10 | 315 |
mesoderm-derived structure | 5.43e-10 | 315 |
presumptive mesoderm | 5.43e-10 | 315 |