FFCP PHASE1:Hg19::chr3:149051194..149051242,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:149051194..149051242,- to FFCP PHASE1:Hg19::chr3:149051194..149051242,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116441 | |EntrezGene=116441 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25181 | |HGNC=25181 | ||
|TSSclassifier=strong | |||
|UniProt=Q96CE8 | |UniProt=Q96CE8 | ||
|association_with_transcript=16bp_to_NM_001184723_5end | |||
|cluster_id=chr3:149051194..149051242,- | |||
|coexpression_cluster_id=C225 | |||
|description=CAGE_peak_5_at_TM4SF18_5end | |||
|id=chr3:149051194..149051242,- | |||
|ontology_enrichment_celltype=CL:0002139!1.58e-20!24;CL:0000115!3.38e-16!35;CL:0002078!1.63e-13!44;CL:0000071!2.05e-13!18;CL:0002546!2.05e-13!18;CL:0005020!4.17e-09!6;CL:0002138!4.17e-09!6;CL:0005022!4.17e-09!6;CL:0000213!6.30e-07!57;CL:0000215!6.30e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.20e-31;24!CL:0002138;4.80e-26;6!CL:0000115;2.76e-22;36!CL:0002078;7.57e-16;45!CL:0002144;6.35e-14;3!CL:0000071;1.42e-13;18!CL:0002618;1.14e-12;3!CL:0000213;7.65e-10;58!CL:0000215;7.65e-10;58!CL:0002549;5.79e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.08e-31,24;CL:0000115,1.44e-29,36;CL:0005020,5.02e-26,6;CL:0002138,5.02e-26,6;CL:0005022,5.02e-26,6;CL:0002078,7.85e-23,45;CL:0000213,8.36e-17,58;CL:0000215,8.36e-17,58;CL:0002144,7.08e-14,3;CL:0000071,1.29e-13,18;CL:0002546,1.29e-13,18;CL:0002618,6.84e-13,3;CL:0000066,2.01e-12,253;CL:0002549,4.92e-09,2 | |||
|ontology_enrichment_development_v019=CL:0005022;4.80e-26;6!CL:0002546;1.42e-13;18!UBERON:0003918;6.65e-07;10!UBERON:0007687;6.65e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.00e-24!115;UBERON:0000477!6.29e-16!286;UBERON:0004111!1.35e-13!241;UBERON:0001986!2.05e-13!18;UBERON:0004638!2.05e-13!18;UBERON:0004852!2.05e-13!18;UBERON:0000487!2.77e-13!22;UBERON:0005743!3.91e-12!86;UBERON:0001017!1.88e-11!82;UBERON:0000073!2.83e-11!94;UBERON:0001016!2.83e-11!94;UBERON:0000025!4.66e-11!194;UBERON:0006914!5.22e-11!25;UBERON:0000955!3.41e-10!69;UBERON:0006238!3.41e-10!69;UBERON:0002616!3.69e-10!59;UBERON:0003075!7.98e-09!86;UBERON:0007284!7.98e-09!86;UBERON:0001049!1.15e-08!57;UBERON:0005068!1.15e-08!57;UBERON:0006241!1.15e-08!57;UBERON:0007135!1.15e-08!57;UBERON:0002346!5.50e-08!90;UBERON:0002465!5.99e-08!10;UBERON:0000119!1.01e-07!312;UBERON:0000153!1.15e-07!129;UBERON:0007811!1.15e-07!129;UBERON:0000033!1.21e-07!123;UBERON:0000468!1.45e-07!659;UBERON:0002049!2.24e-07!79;UBERON:0007798!2.24e-07!79;UBERON:0003080!3.31e-07!42;UBERON:0000483!8.51e-07!309;UBERON:0003056!8.54e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;2.26e-19;8!UBERON:0004536;2.26e-19;8!UBERON:0006558;2.26e-19;8!UBERON:0002465;2.31e-15;10!UBERON:0010523;6.35e-14;3!UBERON:0001915;6.35e-14;3!UBERON:0001982;6.35e-14;3!UBERON:0000487;8.29e-14;22!UBERON:0004638;1.42e-13;18!UBERON:0001986;1.42e-13;18!UBERON:0004852;1.42e-13;18!UBERON:0006914;5.91e-12;25!UBERON:0005629;5.79e-09;2!UBERON:0005358;5.79e-09;2!UBERON:0001886;5.79e-09;2!UBERON:0004086;5.79e-09;2!UBERON:0005282;5.79e-09;2!UBERON:0005281;5.79e-09;2!UBERON:0002066;8.73e-08;5!UBERON:0000055;1.36e-07;65!UBERON:0000490;1.39e-07;33!UBERON:0002405;6.54e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,2.33e-19,8;UBERON:0004536,2.33e-19,8;UBERON:0006558,2.33e-19,8;UBERON:0002465,2.37e-15,10;UBERON:0010523,7.08e-14,3;UBERON:0001915,7.08e-14,3;UBERON:0001982,7.08e-14,3;UBERON:0000487,7.48e-14,22;UBERON:0004638,1.29e-13,18;UBERON:0001986,1.29e-13,18;UBERON:0004852,1.29e-13,18;UBERON:0006914,5.40e-12,25;UBERON:0002049,1.47e-11,78;UBERON:0007798,1.47e-11,78;UBERON:0000055,1.50e-10,68;UBERON:0005629,4.92e-09,2;UBERON:0005358,4.92e-09,2;UBERON:0001886,4.92e-09,2;UBERON:0004086,4.92e-09,2;UBERON:0005282,4.92e-09,2;UBERON:0005281,4.92e-09,2;UBERON:0002066,6.47e-08,5;UBERON:0004535,3.33e-07,109;UBERON:0005177,6.15e-07,101;UBERON:0001009,6.49e-07,112 | |||
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| ||
|short_description=p5@TM4SF18 | |||
}} | }} |
Latest revision as of 21:13, 15 September 2015
Short description: | p5@TM4SF18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TM4SF18_5end |
Coexpression cluster: | C225_ductal_alveolar_giant_prostate_salivary_squamous_Tracheal |
Association with transcript: | 16bp_to_NM_001184723_5end |
EntrezGene: | TM4SF18 |
HGNC: | 25181 |
UniProt: | Q96CE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.08e-31 | 24 |
endothelial cell | 1.44e-29 | 36 |
lymphangioblast | 5.02e-26 | 6 |
endothelial cell of lymphatic vessel | 5.02e-26 | 6 |
vascular lymphangioblast | 5.02e-26 | 6 |
meso-epithelial cell | 7.85e-23 | 45 |
lining cell | 8.36e-17 | 58 |
barrier cell | 8.36e-17 | 58 |
capillary endothelial cell | 7.08e-14 | 3 |
blood vessel endothelial cell | 1.29e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.29e-13 | 18 |
endothelial cell of umbilical vein | 6.84e-13 | 3 |
epithelial cell | 2.01e-12 | 253 |
fibroblast of choroid plexus | 4.92e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 2.33e-19 | 8 |
lymph vasculature | 2.33e-19 | 8 |
lymphatic part of lymphoid system | 2.33e-19 | 8 |
lymphoid system | 2.37e-15 | 10 |
microcirculatory vessel | 7.08e-14 | 3 |
endothelium of capillary | 7.08e-14 | 3 |
capillary | 7.08e-14 | 3 |
simple squamous epithelium | 7.48e-14 | 22 |
blood vessel endothelium | 1.29e-13 | 18 |
endothelium | 1.29e-13 | 18 |
cardiovascular system endothelium | 1.29e-13 | 18 |
squamous epithelium | 5.40e-12 | 25 |
vasculature | 1.47e-11 | 78 |
vascular system | 1.47e-11 | 78 |
vessel | 1.50e-10 | 68 |
vascular plexus | 4.92e-09 | 2 |
ventricle of nervous system | 4.92e-09 | 2 |
choroid plexus | 4.92e-09 | 2 |
brain ventricle | 4.92e-09 | 2 |
ventricular system of brain | 4.92e-09 | 2 |
ventricular system of central nervous system | 4.92e-09 | 2 |
umbilical vein | 6.47e-08 | 5 |
cardiovascular system | 3.33e-07 | 109 |
trunk region element | 6.15e-07 | 101 |
circulatory system | 6.49e-07 | 112 |