FFCP PHASE1:Hg19::chr12:10251603..10251619,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51267 | |EntrezGene=51267 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24355 | |HGNC=24355 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFB4,Q8NC01 | |UniProt=E9PFB4,Q8NC01 | ||
|association_with_transcript=0bp_to_ENST00000457018,NM_016511,uc001qxb.2,uc001qxc.2,uc001qxd.2,uc009zhf.2,uc010sgx.1_5end | |association_with_transcript=0bp_to_ENST00000457018,NM_016511,uc001qxb.2,uc001qxc.2,uc001qxd.2,uc009zhf.2,uc010sgx.1_5end | ||
|cluster_id=chr12:10251603..10251619,- | |||
|coexpression_cluster_id=C1653 | |||
|description=CAGE_peak_3_at_CLEC1A_5end | |description=CAGE_peak_3_at_CLEC1A_5end | ||
|id=chr12:10251603..10251619,- | |id=chr12:10251603..10251619,- | ||
|ontology_enrichment_celltype=CL:0002139!5.61e-28!24;CL:0000115!2.42e-27!35;CL:0000071!2.48e-20!18;CL:0002546!2.48e-20!18;CL:0002078!1.84e-19!44;CL:0000213!1.15e-12!57;CL:0000215!1.15e-12!57;CL:1000413!1.50e-09!9;CL:0005020!3.04e-09!6;CL:0002138!3.04e-09!6;CL:0005022!3.04e-09!6;CL:0002543!1.32e-08!6 | |ontology_enrichment_celltype=CL:0002139!5.61e-28!24;CL:0000115!2.42e-27!35;CL:0000071!2.48e-20!18;CL:0002546!2.48e-20!18;CL:0002078!1.84e-19!44;CL:0000213!1.15e-12!57;CL:0000215!1.15e-12!57;CL:1000413!1.50e-09!9;CL:0005020!3.04e-09!6;CL:0002138!3.04e-09!6;CL:0005022!3.04e-09!6;CL:0002543!1.32e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.68e-58;24!CL:0000115;5.08e-46;36!CL:0000071;7.29e-42;18!CL:0002078;2.30e-26;45!CL:0000213;3.85e-19;58!CL:0000215;3.85e-19;58!CL:1000413;8.06e-19;9!CL:0002138;8.98e-18;6!CL:0002543;1.43e-16;6!CL:0002544;6.26e-12;6!CL:0002144;5.67e-10;3!CL:0002618;1.32e-09;3!CL:0002577;2.05e-09;3!CL:0002545;6.64e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.88e-58,24;CL:0000115,4.44e-55,36;CL:0002078,2.12e-42,45;CL:0000071,4.41e-42,18;CL:0002546,4.41e-42,18;CL:0000213,4.66e-31,58;CL:0000215,4.66e-31,58;CL:1000413,4.57e-19,9;CL:0005020,7.63e-18,6;CL:0002138,7.63e-18,6;CL:0005022,7.63e-18,6;CL:0002543,1.72e-16,6;CL:0002544,5.30e-12,6;CL:0000222,6.67e-11,121;CL:0002144,5.29e-10,3;CL:0002618,1.66e-09,3;CL:0002577,2.40e-09,3;CL:0000076,8.59e-09,63;CL:0002545,6.85e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;7.29e-42;18!CL:0005022;8.98e-18;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.23e-35!115;UBERON:0001986!2.48e-20!18;UBERON:0004638!2.48e-20!18;UBERON:0004852!2.48e-20!18;UBERON:0000487!1.79e-15!22;UBERON:0004111!9.02e-15!241;UBERON:0001049!1.14e-14!57;UBERON:0005068!1.14e-14!57;UBERON:0006241!1.14e-14!57;UBERON:0007135!1.14e-14!57;UBERON:0000025!1.97e-13!194;UBERON:0006914!6.97e-13!25;UBERON:0000477!8.25e-13!286;UBERON:0002346!5.54e-12!90;UBERON:0003080!1.07e-11!42;UBERON:0003075!1.08e-11!86;UBERON:0007284!1.08e-11!86;UBERON:0001017!2.46e-11!82;UBERON:0005743!4.31e-11!86;UBERON:0002780!7.04e-11!41;UBERON:0001890!7.04e-11!41;UBERON:0006240!7.04e-11!41;UBERON:0002616!8.77e-11!59;UBERON:0000055!9.84e-10!69;UBERON:0003915!1.50e-09!9;UBERON:0004700!1.50e-09!9;UBERON:0001917!1.50e-09!9;UBERON:0000955!3.74e-09!69;UBERON:0006238!3.74e-09!69;UBERON:0000073!5.24e-09!94;UBERON:0001016!5.24e-09!94;UBERON:0002049!5.66e-08!79;UBERON:0007798!5.66e-08!79;UBERON:0004872!6.86e-08!84;UBERON:0000467!7.32e-08!625;UBERON:0002020!7.57e-08!34;UBERON:0003528!7.57e-08!34;UBERON:0000119!8.65e-08!312;UBERON:0000480!8.69e-08!626;UBERON:0000483!9.46e-08!309;UBERON:0005631!9.54e-08!14;UBERON:0000158!9.54e-08!14;UBERON:0001893!1.10e-07!34;UBERON:0000468!1.98e-07!659;UBERON:0002791!2.96e-07!33;UBERON:0003056!3.07e-07!61;UBERON:0003124!3.59e-07!7;UBERON:0001638!3.67e-07!9;UBERON:0003920!3.67e-07!9;UBERON:0004582!3.67e-07!9;UBERON:0002619!4.93e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.29e-42;18!UBERON:0001986;7.29e-42;18!UBERON:0004852;7.29e-42;18!UBERON:0000487;2.25e-33;22!UBERON:0006914;8.53e-29;25!UBERON:0003915;8.06e-19;9!UBERON:0004700;8.06e-19;9!UBERON:0001917;8.06e-19;9!UBERON:0000490;8.91e-19;33!UBERON:0001638;1.78e-14;9!UBERON:0003920;1.78e-14;9!UBERON:0004582;1.78e-14;9!UBERON:0000055;2.44e-13;65!UBERON:0001473;4.09e-13;8!UBERON:0004536;4.09e-13;8!UBERON:0006558;4.09e-13;8!UBERON:0001987;5.02e-12;4!UBERON:0002465;2.56e-10;10!UBERON:0000077;4.28e-10;27!UBERON:0010523;5.67e-10;3!UBERON:0001915;5.67e-10;3!UBERON:0001982;5.67e-10;3!UBERON:0007500;5.77e-10;56!UBERON:0001981;5.77e-10;56!UBERON:0004537;5.77e-10;56!UBERON:0002049;1.43e-08;75!UBERON:0007798;1.43e-08;75!UBERON:0003914;2.13e-07;74!UBERON:0002405;2.70e-07;27!UBERON:0002370;3.26e-07;2!UBERON:0005058;3.26e-07;2!UBERON:0009113;3.26e-07;2!UBERON:0005800;6.64e-07;2!UBERON:0001515;6.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.41e-42,18;UBERON:0001986,4.41e-42,18;UBERON:0004852,4.41e-42,18;UBERON:0000487,1.50e-33,22;UBERON:0006914,6.00e-29,25;UBERON:0000055,3.50e-25,68;UBERON:0002049,6.09e-21,78;UBERON:0007798,6.09e-21,78;UBERON:0003915,4.57e-19,9;UBERON:0004700,4.57e-19,9;UBERON:0001917,4.57e-19,9;UBERON:0004872,8.56e-19,83;UBERON:0007500,4.51e-17,59;UBERON:0001981,4.51e-17,59;UBERON:0004537,4.51e-17,59;UBERON:0006965,4.51e-17,59;UBERON:0001638,2.07e-14,9;UBERON:0003920,2.07e-14,9;UBERON:0004582,2.07e-14,9;UBERON:0003124,5.27e-14,7;UBERON:0004535,6.47e-14,109;UBERON:0001009,2.44e-13,112;UBERON:0001473,3.63e-13,8;UBERON:0004536,3.63e-13,8;UBERON:0006558,3.63e-13,8;UBERON:0001987,6.04e-12,4;UBERON:0004340,6.04e-12,4;UBERON:0003914,7.30e-12,117;UBERON:0005631,1.33e-11,14;UBERON:0000158,1.33e-11,14;UBERON:0004111,1.11e-10,240;UBERON:0002465,2.33e-10,10;UBERON:0010523,5.29e-10,3;UBERON:0001915,5.29e-10,3;UBERON:0001982,5.29e-10,3;UBERON:0000077,3.43e-09,29;UBERON:0000025,8.23e-09,192;UBERON:0003081,1.12e-07,203;UBERON:0005800,6.85e-07,2;UBERON:0001515,6.85e-07,2 | |||
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| ||
|short_description=p3@CLEC1A | |short_description=p3@CLEC1A | ||
}} | }} |
Latest revision as of 20:49, 15 September 2015
Short description: | p3@CLEC1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CLEC1A_5end |
Coexpression cluster: | C1653_choriocarcinoma_Endothelial_pancreatic_placenta_lung_Lymphatic_adipose |
Association with transcript: | 0bp_to_ENST00000457018, NM_016511, uc001qxb.2, uc001qxc.2, uc001qxd.2, uc009zhf.2, uc010sgx.1_5end |
EntrezGene: | CLEC1A |
HGNC: | 24355 |
UniProt: | E9PFB4Q8NC01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.88e-58 | 24 |
endothelial cell | 4.44e-55 | 36 |
meso-epithelial cell | 2.12e-42 | 45 |
blood vessel endothelial cell | 4.41e-42 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.41e-42 | 18 |
lining cell | 4.66e-31 | 58 |
barrier cell | 4.66e-31 | 58 |
endothelial cell of artery | 4.57e-19 | 9 |
lymphangioblast | 7.63e-18 | 6 |
endothelial cell of lymphatic vessel | 7.63e-18 | 6 |
vascular lymphangioblast | 7.63e-18 | 6 |
vein endothelial cell | 1.72e-16 | 6 |
aortic endothelial cell | 5.30e-12 | 6 |
mesodermal cell | 6.67e-11 | 121 |
capillary endothelial cell | 5.29e-10 | 3 |
endothelial cell of umbilical vein | 1.66e-09 | 3 |
placental epithelial cell | 2.40e-09 | 3 |
squamous epithelial cell | 8.59e-09 | 63 |
thoracic aorta endothelial cell | 6.85e-07 | 2 |