FFCP PHASE1:Hg19::chr10:102106384..102106429,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:102106384..102106429,+
|short_description=p15@SCD
|description=CAGE_peak_15_at_SCD_5end
|association_with_transcript=-342bp_to_NM_005063,uc001kqy.2_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6319 | |EntrezGene=6319 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10571 | |HGNC=10571 | ||
|TSSclassifier=strong | |||
|UniProt=O00767 | |UniProt=O00767 | ||
|association_with_transcript=-342bp_to_NM_005063,uc001kqy.2_5end | |||
|cluster_id=chr10:102106384..102106429,+ | |||
|coexpression_cluster_id=C356 | |||
|description=CAGE_peak_15_at_SCD_5end | |||
|id=chr10:102106384..102106429,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.76e-11!254 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.13e-09;10!CL:0000147;3.59e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.05e-09,10;CL:0000541,2.05e-09,10;CL:0000147,2.49e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.24e-18!235;DOID:14566!2.74e-18!239;DOID:0050687!5.47e-15!143;DOID:305!9.30e-13!106;DOID:0050686!6.92e-09!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.15e-08,239;DOID:0050687,2.14e-08,143;DOID:162,6.91e-08,235;DOID:305,2.34e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.53e-10!94;UBERON:0001016!3.53e-10!94;UBERON:0005743!3.63e-09!86;UBERON:0001017!7.39e-09!82;UBERON:0003075!6.79e-08!86;UBERON:0007284!6.79e-08!86;UBERON:0002346!8.15e-08!90;UBERON:0000955!3.56e-07!69;UBERON:0006238!3.56e-07!69;UBERON:0000924!3.93e-07!173;UBERON:0006601!3.93e-07!173;UBERON:0004121!4.16e-07!169;UBERON:0001049!5.35e-07!57;UBERON:0005068!5.35e-07!57;UBERON:0006241!5.35e-07!57;UBERON:0007135!5.35e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,9.85e-07,54;UBERON:0005173,9.85e-07,54 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0.245733936501509,2.09340350391728,0.218441372130172,0.527533956456907,0.123766352960047,0,1.34465029290355,0,0,0,0.61560529038394,0.612002073732759,0.313454721478088,0,1.09499540058307,0.627713197974014,1.22261449196722,1.06730766284929,2.2826126580967,0,0,0.309632246632152,0.919421224478927,0.30120591877825,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.639312809217652,0,0,0,0,0,0.661743720148475,0.665188192387692,0.087834785693126,3.86388272718252,0.364295288292542,0.370784442784429,0,0.174129737299267,0.26591592103773,0,0,0,0.596287222100115,0,0.347140501607594,1.69592382577203,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0.66944122552934,0,0,0.732186172644509,0.367663080345869,0,0.357198913136319,0.22452937262617,0.675668882899933,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,1.06748995729705,0,0.311211035399766,0.404132016209064,0.163461903113459,0.454072282934794,0,0.937285727335186,0,0.570471821544449,0.149448680551801,0.23486899728753,0.161872944368132,0.280901613404497,0,0.368502951935304,0,0,0.247266929278557,0.910161361938026,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0.300476117813194,0.226864366320042,0,0.213557388818567,0.423863802319124,0,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0,0.276149695926898,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0.545492241181669,0.573609190778008,0.609868530647977,0.795178609928912,1.04574548582567,1.0366105501537,1.7662459561294,0.36497735907583,0,0,0,0,0,1.0647612003586,0.842923450390509,1.44606617930089,0.661763836394364,0.871517776369625,0.71181185733329,1.07865046528132,1.17732879075208,2.30848294167834,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.491953754172454,0.171567810298526,0.439001141634502,0,0.201057944823262,0.0925884451585296,0.325808305310325,0,0,0.927443239800615,0.352226082707465,0.144366447761074,0.925971025153221,0,0.790204397959275,0.858486162094873,0,0,0,0,0.16798212819886,0.567100388969546,0.179117045405697,0,0.766765358330422,0,0.352193736052904,0.414656231081544,0.144119953416961,0.25248486685276,2.41291998310242,0.763976851116555,7.03304683260282,0,0.205654985406647,1.8020583470635,4.57322292208925,0.672786506072164,0,0.2933531432838,0.646358578788889,0,0,0,0,0.771622122786426,0,0.799266537048298,0.428933980974443,0.542621605391443,2.46972101034231,0,1.06617584622764,0,0.301439377059586,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0,0.205476322550383,0.358121926479791,0,0,0.646882724578552,0.128343036279748,0.508189248444927,1.30139853857622,0.773288812777695,1.00509759200609,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0.157702415033935,0,0.300946099727719,0,0,0.664225598535437,0.553107505625109,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0.321707842287215,0,0.462629081407967,0.177561725313127,0.246381468041427,0,0.116210378459959,0.966875596732978,0,0.0920809889358963,0.229628896329213,0.182091168006717,0.262248829918848,0,0.308061348417659,0.784349769176855,1.46139224653261,0,1.13733384070897,0,0.215915916102139,0,1.35473218771926,0.501689773854853,0.509752546090077,0,0.671624264166535,0,0,1.79515087581472,0,0.325378394664303,0.206082023295445,0.732555718546747,0.495056999523528,0.574265537996172,0,0,0.48335359146061,0.154048617114644,0.460511024178389,0,0.429680979473094,0,0.340906509664404,0.445160178233687,0.330569830721956,0,0.382838137483752,0.50578890427775,0.464845549297286,0.31481234683064,0,0.924100740528266,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0.190630193923825,0.511795582622668,0,0,0.78494864019923,0.359744915166629,0,0.353437207037059,0,0,0,0,0,1.05650146756755,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0.811641507850816,0,1.40847801266121,0.286822704408103,0.196498082026242,0.35667105148125,0,0,0,0.379473173765715,0.349934720244983,0.769776901804097,0,1.08890984861323,0.188287601553558,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,2.02965735142199,2.88743956579008,0,0,0,0.782560276832555,1.59426272728822,0,0.191505370132367,0.846694330895531,0.324621940274555,0.561594356226918,0.456469358066384,0.47003968731907,0,0,0,0,0,0,0.614481528616916,0,0,1.36771666781428,0.835218521685727,0,0.270455678475983,0.33307196799782,0,1.12284324244932,0.146508179271894,5.33986295697859,0,1.13654458722565,0.23874448473769,0,0,0,0.422008249231538,0.222617410045812,0.494411622680279,0.63337622438398,0,0,1.25966373927138,0.511343412510774,0.738508832766417,0.622079175323615,0.629078458031288,0.179021174675609,0,0.295930216910801,0,0,0,0.278304294485554,1.99613798001194,0,0.61221999997337,0,0.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| ||
|short_description=p15@SCD | |||
}} | }} |
Latest revision as of 20:21, 15 September 2015
Short description: | p15@SCD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SCD_5end |
Coexpression cluster: | C356_renal_Smooth_Chondrocyte_thyroid_serous_Small_mesenchymal |
Association with transcript: | -342bp_to_NM_005063, uc001kqy.2_5end |
EntrezGene: | SCD |
HGNC: | 10571 |
UniProt: | O00767 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.05e-09 | 10 |
melanoblast | 2.05e-09 | 10 |
pigment cell | 2.49e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 9.85e-07 | 54 |
abdominal segment element | 9.85e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.15e-08 | 239 |
cell type cancer | 2.14e-08 | 143 |
cancer | 6.91e-08 | 235 |
carcinoma | 2.34e-07 | 106 |