FFCP PHASE1:Hg19::chr12:9066514..9066528,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:9066514..9066528,+ to FFCP PHASE1:Hg19::chr12:9066514..9066528,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1911 | |EntrezGene=1911 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3182 | |HGNC=3182 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6F5 | |UniProt=F5H6F5 | ||
|association_with_transcript=22bp_to_ENST00000538657_5end | |||
|cluster_id=chr12:9066514..9066528,+ | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_6_at_PHC1_5end | |||
|id=chr12:9066514..9066528,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.64e-13!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;7.55e-42;7!CL:0000586;7.55e-42;7!CL:0002322;2.51e-15;5!CL:0000540;6.12e-13;6!CL:0000404;6.12e-13;6!CL:0000047;2.60e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.97e-42,7;CL:0000586,7.97e-42,7;CL:0000047,5.52e-21,8;CL:0002322,3.61e-15,5;CL:0000540,4.26e-13,6;CL:0000031,4.26e-13,6;CL:0000404,4.26e-13,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.83e-29;10!UBERON:0005564;1.83e-29;10!CL:0000031;6.12e-13;6 | |||
|ontology_enrichment_disease=DOID:3095!2.02e-09!22;DOID:2994!2.02e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.24e-13;22!DOID:2994;1.24e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.26e-13,22;DOID:2994,1.26e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.25e-14!86;UBERON:0001017!3.03e-14!82;UBERON:0000073!1.83e-13!94;UBERON:0001016!1.83e-13!94;UBERON:0001049!3.31e-13!57;UBERON:0005068!3.31e-13!57;UBERON:0006241!3.31e-13!57;UBERON:0007135!3.31e-13!57;UBERON:0002616!1.21e-12!59;UBERON:0000955!6.23e-11!69;UBERON:0006238!6.23e-11!69;UBERON:0001869!3.79e-10!32;UBERON:0002346!5.84e-10!90;UBERON:0001893!2.21e-09!34;UBERON:0002020!2.24e-09!34;UBERON:0003528!2.24e-09!34;UBERON:0003076!1.02e-08!15;UBERON:0003057!1.02e-08!15;UBERON:0003075!1.09e-08!86;UBERON:0007284!1.09e-08!86;UBERON:0004733!1.10e-08!12;UBERON:0002028!1.10e-08!12;UBERON:0007277!1.10e-08!12;UBERON:0001950!1.13e-08!20;UBERON:0000473!2.46e-08!8;UBERON:0002791!2.47e-08!33;UBERON:0000924!2.66e-08!173;UBERON:0006601!2.66e-08!173;UBERON:0004732!6.25e-08!13;UBERON:0002619!9.52e-08!22;UBERON:0004121!2.47e-07!169;UBERON:0002780!2.68e-07!41;UBERON:0001890!2.68e-07!41;UBERON:0006240!2.68e-07!41;UBERON:0003080!4.66e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.08e-36;8!UBERON:0003135;7.82e-27;11!UBERON:0000991;2.90e-14;21!UBERON:0003101;1.24e-13;22!UBERON:0000079;1.24e-13;22!UBERON:0000922;7.46e-13;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.14e-36,8;UBERON:0003135,8.10e-27,11;UBERON:0000991,2.95e-14,21;UBERON:0009196,2.95e-14,21;UBERON:0009117,2.95e-14,21;UBERON:0005564,2.95e-14,21;UBERON:0004176,1.26e-13,22;UBERON:0003101,1.26e-13,22;UBERON:0000079,1.26e-13,22 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0.337552664482532,0,0,0,0,0,0.201504196455281,0,0,0,0,1.09776335516636,0.530119073285941,0.348581828608555,0.310983165046111,1.00928340350251,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0.347249989866585,0,0,0,0.110579259931225,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.964518890790115,1.51293380256957,1.66176135211674,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0.169732529954025,0.425149840203366,0,0,0,0,0,0,0,0.256916900385838,1.41696576325585,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0.135075169236789,0,0,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.109265571963696,0.253397002022874,2.03977659483963,2.6721740526556,4.5028500772074,1.25353769646188,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0.213454691755431,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p6@PHC1 | |||
}} | }} |
Latest revision as of 20:14, 15 September 2015
Short description: | p6@PHC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PHC1_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 22bp_to_ENST00000538657_5end |
EntrezGene: | PHC1 |
HGNC: | 3182 |
UniProt: | F5H6F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.97e-42 | 7 |
germ cell | 7.97e-42 | 7 |
neuronal stem cell | 5.52e-21 | 8 |
embryonic stem cell | 3.61e-15 | 5 |
neuron | 4.26e-13 | 6 |
neuroblast | 4.26e-13 | 6 |
electrically signaling cell | 4.26e-13 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 1.14e-36 | 8 |
male reproductive organ | 8.10e-27 | 11 |
gonad | 2.95e-14 | 21 |
indifferent external genitalia | 2.95e-14 | 21 |
indifferent gonad | 2.95e-14 | 21 |
gonad primordium | 2.95e-14 | 21 |
external genitalia | 1.26e-13 | 22 |
male organism | 1.26e-13 | 22 |
male reproductive system | 1.26e-13 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.26e-13 | 22 |
germ cell cancer | 1.26e-13 | 22 |