FFCP PHASE1:Hg19::chr1:109241964..109241981,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55119 | |EntrezGene=55119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25512 | |HGNC=25512 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VTL8 | |UniProt=Q5VTL8 | ||
|association_with_transcript=-222bp_to_AY211915_5end | |association_with_transcript=-222bp_to_AY211915_5end | ||
|cluster_id=chr1:109241964..109241981,+ | |||
|coexpression_cluster_id=C1037 | |||
|description=CAGE_peak_2_at_PRPF38B_5end | |description=CAGE_peak_2_at_PRPF38B_5end | ||
|id=chr1:109241964..109241981,+ | |id=chr1:109241964..109241981,+ | ||
|ontology_enrichment_celltype=CL:0002032!1.50e-16!165;CL:0000837!1.50e-16!165;CL:0000037!4.98e-16!172;CL:0000566!4.98e-16!172;CL:0000988!4.86e-14!182;CL:0002087!1.27e-13!119;CL:0002031!2.12e-11!124;CL:0000738!6.52e-11!140;CL:0000860!8.03e-11!45;CL:0000763!1.50e-10!112;CL:0000049!1.50e-10!112;CL:0002057!1.44e-09!42;CL:0002194!1.12e-07!63;CL:0000576!1.12e-07!63;CL:0000040!1.12e-07!63;CL:0000559!1.12e-07!63;CL:0002009!4.24e-07!65;CL:0000839!7.73e-07!70 | |ontology_enrichment_celltype=CL:0002032!1.50e-16!165;CL:0000837!1.50e-16!165;CL:0000037!4.98e-16!172;CL:0000566!4.98e-16!172;CL:0000988!4.86e-14!182;CL:0002087!1.27e-13!119;CL:0002031!2.12e-11!124;CL:0000738!6.52e-11!140;CL:0000860!8.03e-11!45;CL:0000763!1.50e-10!112;CL:0000049!1.50e-10!112;CL:0002057!1.44e-09!42;CL:0002194!1.12e-07!63;CL:0000576!1.12e-07!63;CL:0000040!1.12e-07!63;CL:0000559!1.12e-07!63;CL:0002009!4.24e-07!65;CL:0000839!7.73e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.18e-09;33!CL:0002057;1.18e-09;33!CL:0000473;1.96e-07;39!CL:0000234;1.96e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,1.09e-15,161;CL:0000837,1.09e-15,161;CL:0000037,3.52e-15,168;CL:0000988,1.60e-13,177;CL:0002087,9.11e-13,115;CL:0002031,1.27e-10,120;CL:0000738,3.66e-10,136;CL:0000763,8.40e-10,108;CL:0000049,8.40e-10,108;CL:0000860,1.43e-09,42;CL:0002057,1.43e-09,42;CL:0000473,9.05e-09,48;CL:0000234,9.05e-09,48;CL:0002194,6.49e-07,59;CL:0000576,6.49e-07,59;CL:0000040,6.49e-07,59;CL:0000559,6.49e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.55e-07;42 | |||
|ontology_enrichment_disease=DOID:162!2.35e-19!235;DOID:14566!1.17e-18!239;DOID:2531!1.33e-11!51;DOID:0060083!1.33e-11!51;DOID:1240!3.18e-10!39;DOID:0050686!5.93e-10!137;DOID:8692!8.80e-08!31;DOID:0050687!1.40e-07!143 | |ontology_enrichment_disease=DOID:162!2.35e-19!235;DOID:14566!1.17e-18!239;DOID:2531!1.33e-11!51;DOID:0060083!1.33e-11!51;DOID:1240!3.18e-10!39;DOID:0050686!5.93e-10!137;DOID:8692!8.80e-08!31;DOID:0050687!1.40e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.05e-08;39!DOID:8692;8.32e-08;31!DOID:2531;1.39e-07;51!DOID:0060083;1.39e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.12e-19,235;DOID:14566,1.06e-18,239;DOID:2531,1.31e-11,51;DOID:0060083,1.31e-11,51;DOID:1240,3.14e-10,39;DOID:0050686,5.73e-10,137;DOID:8692,8.72e-08,31;DOID:0050687,1.36e-07,143 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@PRPF38B | |short_description=p2@PRPF38B | ||
}} | }} |
Latest revision as of 19:59, 15 September 2015
Short description: | p2@PRPF38B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRPF38B_5end |
Coexpression cluster: | C1037_acute_medulloblastoma_Monocytederived_CD4_diffuse_testicular_small |
Association with transcript: | -222bp_to_AY211915_5end |
EntrezGene: | PRPF38B |
HGNC: | 25512 |
UniProt: | Q5VTL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 1.09e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-15 | 161 |
hematopoietic stem cell | 3.52e-15 | 168 |
hematopoietic cell | 1.60e-13 | 177 |
nongranular leukocyte | 9.11e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 1.27e-10 | 120 |
leukocyte | 3.66e-10 | 136 |
myeloid cell | 8.40e-10 | 108 |
common myeloid progenitor | 8.40e-10 | 108 |
classical monocyte | 1.43e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.43e-09 | 42 |
defensive cell | 9.05e-09 | 48 |
phagocyte | 9.05e-09 | 48 |
monopoietic cell | 6.49e-07 | 59 |
monocyte | 6.49e-07 | 59 |
monoblast | 6.49e-07 | 59 |
promonocyte | 6.49e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.12e-19 | 235 |
disease of cellular proliferation | 1.06e-18 | 239 |
hematologic cancer | 1.31e-11 | 51 |
immune system cancer | 1.31e-11 | 51 |
leukemia | 3.14e-10 | 39 |
organ system cancer | 5.73e-10 | 137 |
myeloid leukemia | 8.72e-08 | 31 |
cell type cancer | 1.36e-07 | 143 |