FFCP PHASE1:Hg19::chr10:101673782..101673798,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23268 | |EntrezGene=23268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30373 | |HGNC=30373 | ||
|TSSclassifier=strong | |||
|UniProt=Q6XZF7 | |UniProt=Q6XZF7 | ||
|association_with_transcript=39bp_to_BC041628_5end | |association_with_transcript=39bp_to_BC041628_5end | ||
|cluster_id=chr10:101673782..101673798,- | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_4_at_DNMBP_5end | |description=CAGE_peak_4_at_DNMBP_5end | ||
|id=chr10:101673782..101673798,- | |id=chr10:101673782..101673798,- | ||
|ontology_enrichment_celltype=CL:0002322!5.22e-15!5;CL:0000133!2.90e-14!59;CL:0000128!9.02e-14!7;CL:0000126!9.02e-14!7;CL:0000127!9.02e-14!7;CL:0002453!9.02e-14!7;CL:0000221!1.67e-13!71;CL:0002319!3.73e-12!25;CL:0000039!4.14e-10!7;CL:0000586!4.14e-10!7;CL:0002605!3.55e-09!3;CL:0000333!4.86e-09!41;CL:0000243!5.16e-09!15;CL:0000125!5.16e-09!15;CL:0000030!5.16e-09!15;CL:0000339!5.16e-09!15;CL:0000064!6.60e-09!3;CL:0005012!6.60e-09!3;CL:0000067!6.60e-09!3;CL:0002304!6.60e-09!3;CL:0000095!6.55e-08!17;CL:0000123!6.55e-08!17 | |ontology_enrichment_celltype=CL:0002322!5.22e-15!5;CL:0000133!2.90e-14!59;CL:0000128!9.02e-14!7;CL:0000126!9.02e-14!7;CL:0000127!9.02e-14!7;CL:0002453!9.02e-14!7;CL:0000221!1.67e-13!71;CL:0002319!3.73e-12!25;CL:0000039!4.14e-10!7;CL:0000586!4.14e-10!7;CL:0002605!3.55e-09!3;CL:0000333!4.86e-09!41;CL:0000243!5.16e-09!15;CL:0000125!5.16e-09!15;CL:0000030!5.16e-09!15;CL:0000339!5.16e-09!15;CL:0000064!6.60e-09!3;CL:0005012!6.60e-09!3;CL:0000067!6.60e-09!3;CL:0002304!6.60e-09!3;CL:0000095!6.55e-08!17;CL:0000123!6.55e-08!17 | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.24e-48;5!CL:0000039;1.80e-22;7!CL:0000586;1.80e-22;7!CL:0002321;5.27e-16;15!CL:0000540;6.89e-15;6!CL:0000404;6.89e-15;6!CL:0000148;3.45e-09;10!CL:0000075;1.25e-08;27!CL:0000710;8.56e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.24e-48,5;CL:0000039,1.66e-22,7;CL:0000586,1.66e-22,7;CL:0000540,6.73e-15,6;CL:0000031,6.73e-15,6;CL:0000404,6.73e-15,6;CL:0000047,2.57e-11,8;CL:0000148,3.50e-09,10;CL:0000541,3.50e-09,10;CL:0000133,6.14e-09,59;CL:0000075,1.27e-08,27;CL:0000710,8.72e-08,20;CL:0000221,3.40e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.21e-24;10!UBERON:0005564;4.21e-24;10!CL:0000031;6.89e-15;6 | |||
|ontology_enrichment_disease=DOID:3095!2.27e-21!22;DOID:2994!2.27e-21!22;DOID:171!3.73e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:3095;6.80e-34;22!DOID:2994;6.80e-34;22!DOID:171;5.10e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.93e-34,22;DOID:2994,6.93e-34,22;DOID:171,5.32e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.04e-26!94;UBERON:0001016!3.04e-26!94;UBERON:0005743!1.39e-24!86;UBERON:0002346!1.28e-23!90;UBERON:0003056!7.61e-23!61;UBERON:0001017!1.21e-22!82;UBERON:0000924!2.34e-20!173;UBERON:0006601!2.34e-20!173;UBERON:0000955!2.51e-20!69;UBERON:0006238!2.51e-20!69;UBERON:0003075!8.12e-20!86;UBERON:0007284!8.12e-20!86;UBERON:0002616!1.05e-17!59;UBERON:0004121!1.98e-17!169;UBERON:0001049!7.97e-17!57;UBERON:0005068!7.97e-17!57;UBERON:0006241!7.97e-17!57;UBERON:0007135!7.97e-17!57;UBERON:0000033!8.11e-17!123;UBERON:0002780!9.17e-17!41;UBERON:0001890!9.17e-17!41;UBERON:0006240!9.17e-17!41;UBERON:0003080!2.93e-16!42;UBERON:0000153!1.28e-15!129;UBERON:0007811!1.28e-15!129;UBERON:0002791!5.59e-15!33;UBERON:0001893!1.94e-14!34;UBERON:0001869!1.75e-13!32;UBERON:0002020!1.66e-12!34;UBERON:0003528!1.66e-12!34;UBERON:0000956!2.07e-11!25;UBERON:0000203!2.07e-11!25;UBERON:0000488!4.87e-11!4;UBERON:0000970!3.65e-09!20;UBERON:0001778!6.60e-09!3;UBERON:0001775!6.60e-09!3;UBERON:0002104!1.21e-08!21;UBERON:0007625!2.22e-08!11;UBERON:0001950!7.70e-08!20;UBERON:0000020!9.69e-08!23;UBERON:0000019!9.94e-08!19;UBERON:0000047!9.94e-08!19;UBERON:0004088!9.94e-08!19;UBERON:0003072!9.94e-08!19;UBERON:0003071!9.94e-08!19;UBERON:0004128!9.94e-08!19;UBERON:0002203!2.40e-07!6;UBERON:0001768!2.40e-07!6;UBERON:0001032!2.40e-07!24;UBERON:0004456!2.40e-07!24;UBERON:0002619!5.08e-07!22;UBERON:0001456!7.37e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.13e-21;4!UBERON:0000923;1.13e-21;4!UBERON:0010316;1.13e-21;4!UBERON:0005291;1.13e-21;4!UBERON:0000473;1.06e-19;8!UBERON:0002050;1.80e-17;5!UBERON:0005423;1.80e-17;5!UBERON:0000922;2.14e-16;49!UBERON:0003135;2.14e-14;11!UBERON:0000991;1.96e-11;21!UBERON:0003101;2.79e-07;22!UBERON:0000079;2.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.91e-20,8;UBERON:0003135,2.03e-14,11;UBERON:0000991,1.89e-11,21;UBERON:0009196,1.89e-11,21;UBERON:0009117,1.89e-11,21;UBERON:0005564,1.89e-11,21;UBERON:0004176,6.37e-11,22;UBERON:0003101,2.73e-07,22;UBERON:0000079,2.73e-07,22 | |||
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| ||
|short_description=p4@DNMBP | |short_description=p4@DNMBP | ||
}} | }} |
Latest revision as of 19:23, 15 September 2015
Short description: | p4@DNMBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DNMBP_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 39bp_to_BC041628_5end |
EntrezGene: | DNMBP |
HGNC: | 30373 |
UniProt: | Q6XZF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.24e-48 | 5 |
germ line cell | 1.66e-22 | 7 |
germ cell | 1.66e-22 | 7 |
neuron | 6.73e-15 | 6 |
neuroblast | 6.73e-15 | 6 |
electrically signaling cell | 6.73e-15 | 6 |
neuronal stem cell | 2.57e-11 | 8 |
melanocyte | 3.50e-09 | 10 |
melanoblast | 3.50e-09 | 10 |
neurectodermal cell | 6.14e-09 | 59 |
columnar/cuboidal epithelial cell | 1.27e-08 | 27 |
neurecto-epithelial cell | 8.72e-08 | 20 |
ectodermal cell | 3.40e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 9.91e-20 | 8 |
male reproductive organ | 2.03e-14 | 11 |
gonad | 1.89e-11 | 21 |
indifferent external genitalia | 1.89e-11 | 21 |
indifferent gonad | 1.89e-11 | 21 |
gonad primordium | 1.89e-11 | 21 |
external genitalia | 6.37e-11 | 22 |
male organism | 2.73e-07 | 22 |
male reproductive system | 2.73e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.93e-34 | 22 |
germ cell cancer | 6.93e-34 | 22 |
neuroectodermal tumor | 5.32e-09 | 10 |