FFCP PHASE1:Hg19::chr1:10856694..10856715,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54897 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26002 | |||
|TSSclassifier=strong | |||
|UniProt=Q86V15,B3KRV8 | |||
|association_with_transcript=0bp_to_ENST00000344008,ENST00000377022,NM_001079843,NM_017766,uc001aro.2,uc001arp.1_5end | |||
|cluster_id=chr1:10856694..10856715,- | |||
|coexpression_cluster_id=C3843 | |||
|description=CAGE_peak_3_at_CASZ1_5end | |||
|id=chr1:10856694..10856715,- | |||
|ontology_enrichment_celltype=CL:0000066!1.88e-20!254;CL:0002076!4.68e-11!43;CL:0000223!7.09e-09!59;CL:0000082!1.50e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002159;2.30e-08;14!CL:0002076;1.20e-07;42!CL:0000240;1.68e-07;6!CL:0000311;1.68e-07;6!CL:0000079;1.68e-07;6!CL:0000237;1.68e-07;6!CL:0002251;2.30e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.62e-10,42;CL:0000066,3.90e-09,253;CL:0002159,3.17e-08,14;CL:0002251,1.77e-07,20;CL:0000240,2.69e-07,6;CL:0000311,2.69e-07,6;CL:0000079,2.69e-07,6;CL:0000237,2.69e-07,6;CL:0000036,2.69e-07,6;CL:0000357,2.69e-07,6;CL:0000114,2.69e-07,6;CL:0000223,7.80e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000357;1.68e-07;6!CL:0000114;1.68e-07;6 | |||
|ontology_enrichment_disease=DOID:0050687!9.06e-17!143;DOID:305!4.52e-15!106;DOID:0050615!5.45e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:3119;4.98e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,4.95e-09,14;DOID:0050687,5.73e-08,143;DOID:305,9.75e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.38e-12!169;UBERON:0000925!1.38e-12!169;UBERON:0006595!1.38e-12!169;UBERON:0000464!2.16e-11!104;UBERON:0004921!5.25e-11!129;UBERON:0004185!5.25e-11!129;UBERON:0001007!9.82e-11!155;UBERON:0001555!9.82e-11!155;UBERON:0007026!9.82e-11!155;UBERON:0000466!7.05e-10!126;UBERON:0005181!9.61e-10!35;UBERON:0000468!1.19e-09!659;UBERON:0001004!3.51e-09!72;UBERON:0005157!3.89e-09!51;UBERON:0002048!4.10e-09!22;UBERON:0000117!4.10e-09!22;UBERON:0000171!4.10e-09!22;UBERON:0000170!4.10e-09!22;UBERON:0005597!4.10e-09!22;UBERON:0000118!4.10e-09!22;UBERON:0005178!4.19e-09!34;UBERON:0002224!4.19e-09!34;UBERON:0005177!7.97e-09!107;UBERON:0005153!8.44e-09!37;UBERON:0000077!9.32e-09!130;UBERON:0000481!7.20e-08!347;UBERON:0001041!9.95e-08!98;UBERON:0000475!1.34e-07!365;UBERON:0007023!1.46e-07!115;UBERON:0004802!1.50e-07!19;UBERON:0000115!1.50e-07!19;UBERON:0000922!1.94e-07!612;UBERON:0005911!2.29e-07!82;UBERON:0000467!4.46e-07!625;UBERON:0003104!4.52e-07!238;UBERON:0009142!4.52e-07!238;UBERON:0000480!5.94e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.26e-11;33!UBERON:0001041;1.34e-11;14!UBERON:0005409;5.11e-08;22!UBERON:0005910;4.92e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.61e-12,160;UBERON:0000925,6.61e-12,160;UBERON:0006595,6.61e-12,160;UBERON:0004921,2.34e-10,118;UBERON:0001007,1.40e-09,145;UBERON:0001555,1.40e-09,145;UBERON:0007026,1.40e-09,145;UBERON:0007023,7.63e-09,114;UBERON:0001004,3.07e-08,74;UBERON:0003103,5.11e-08,68;UBERON:0005181,1.19e-07,35;UBERON:0005910,3.93e-07,6;UBERON:0000915,5.01e-07,52;UBERON:0001041,5.12e-07,87;UBERON:0005178,7.38e-07,34;UBERON:0002224,7.38e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0.369363174230364,0.204000691244253,0.313454721478088,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0.154816123316076,0.919421224478927,2.10844143144775,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.945348171640679,0.443458794925128,0.527008714158756,1.5062593682237,2.5500670180478,3.33705998505986,0.324547393654683,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0.33472061276467,0.402829317109147,0,0.488124115096339,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,6.10531672999548,0,0.25326102332916,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469737994575059,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0.538168907066586,0,0,0.900273288253207,0.103052529238439,0.257640540045629,0,0,0,0.504867548488229,0,0,0.355009592516614,0,0.169560592310488,1.54608682530637,0.818238361772504,0.286804595389004,1.34171076742555,1.45782745153634,0.69716365721711,1.55491582523056,0.504641701751257,1.82488679537915,0,0.643240938192885,0,0,0,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0,1.4763109092493,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0,3.40225884766739,2.24803506515239,1.40740561376283,2.12953423864618,0,0,0,1.85488647960123,0,0,0.462985512576611,0.190254152234598,3.95102198979638,4.29243081047436,0,0,0,0,1.6798212819886,1.27597587518148,0.716468181622786,0,1.91691339582606,0,0,0,0.144119953416961,0,0.063497894292169,0.381988425558278,0,1.71072446022705,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0,0,1.71571711905428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.802025881213139,2.11786274552562,0,0,0.131124414959424,0.902399225814824,0.462092022626489,3.13739907670742,2.92278449306521,0.316654886678627,0,0,0.863663664408557,1.54227252690289,0,0.501689773854853,2.29388645740534,2.49322802678617,1.11937377361089,0,0,0,0.328014645699706,0.325378394664303,0.721287081534056,1.83138929636687,1.48517099857058,2.29706215198469,2.60024098414608,0,0.580024309752732,0.154048617114644,0.15350367472613,0.827019434907183,0.214840489736547,0.145016693914229,0.511359764496605,2.93805717634233,1.32227932288782,0.384380134730212,3.57315594984836,1.11273558941105,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,1.58510321173008,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,2.69421915631434,1.34060455107157,1.08890984861323,0.282431402330337,2.58303223602738,6.73885902670502,3.10401107475673,2.98640420269047,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7428108081644,1.61158997199083,1.94176834799221,0,0.852408440419239,0,1.48482340416319,0.614321404198464,0,0,0,0,0.211125408127993,1.79323189425963,1.10513566212459,6.80218419206545,1.94310496754094,0,0,0.629078458031288,1.07412704805365,0,1.67693789582787,0,0,0,0,0,1.82299432759663,3.06109999986685,2.89999830173917,0.568967241427498,1.77977555204936,3.78220290828698,5.51589397186343,1.16641845353302,1.73624994933292,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0.435753854075961,2.64905114129346,1.92375646259493,0.683652335082007,0.46112780877612,0,0,0,0.457987967009312,1.06606955203727,0,0,0,0,0,0,0,0,1.05499032264014,0.979396848954886,0,3.89499551535764,5.97157158647103,6.1035719507304,4.27721101453538,0,0,0,0.067401132980677,9.63093176758547,0,0,0.19566461893209,1.69946265673865,7.49710365413842,3.62972148145992,0,0.126373159256976,0.901940516486955,1.34794648816421,0,0.330991955875499,0.313932918407225,0,0.284609546029793,1.52542140314453,0.694238953340524,0.783939179315021,0.34823682632161,1.04836000945218,4.47163684426203,0,0,0,2.71569246167574,0,9.94315259434343,0.548167698587004,0,0.253243183823515,1.36885967914362,1.20238230377301,4.0556069000477,2.79733453414982,3.74635084600676,4.81053703896846,6.86379991447858,0.14405479798815,0,4.24249262310232,0.135904206073614,0.523014231561666,0.203996435272644,0.288950589901519,0.600420288709789,0.136905378891993,0,0.859530882839914,0,4.46851842035607,4.35404805622199,2.15361907373044,5.59101201397175,9.44297305900456,3.79391477651183,8.59948447830096,0,0,0.0787831823072236,0.329663433524666,0.26961417541674,0.295282444544246,0,0,0,0.803765742325096,0.275078873194468,0.415440338029185,0.449947783103001,8.51182150013745,0.0607495566580247,3.01891218839339,1.10327990218877,5.4028225779048,0.105600336519406,0.537862017998534,0.767660789277781,2.85878130549347,5.29673576292345,0,0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| |||
|short_description=p3@CASZ1 | |||
}} |
Latest revision as of 19:05, 15 September 2015
Short description: | p3@CASZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CASZ1_5end |
Coexpression cluster: | C3843_merkel_pineal_small_heart_maxillary_skeletal_salivary |
Association with transcript: | 0bp_to_ENST00000344008, ENST00000377022, NM_001079843, NM_017766, uc001aro.2, uc001arp.1_5end |
EntrezGene: | CASZ1 |
HGNC: | 26002 |
UniProt: | Q86V15B3KRV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.62e-10 | 42 |
epithelial cell | 3.90e-09 | 253 |
general ecto-epithelial cell | 3.17e-08 | 14 |
epithelial cell of alimentary canal | 1.77e-07 | 20 |
stratified squamous epithelial cell | 2.69e-07 | 6 |
keratin accumulating cell | 2.69e-07 | 6 |
stratified epithelial cell | 2.69e-07 | 6 |
keratinizing barrier epithelial cell | 2.69e-07 | 6 |
epithelial fate stem cell | 2.69e-07 | 6 |
stratified epithelial stem cell | 2.69e-07 | 6 |
surface ectodermal cell | 2.69e-07 | 6 |
endodermal cell | 7.80e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 6.61e-12 | 160 |
endoderm | 6.61e-12 | 160 |
presumptive endoderm | 6.61e-12 | 160 |
subdivision of digestive tract | 2.34e-10 | 118 |
digestive system | 1.40e-09 | 145 |
digestive tract | 1.40e-09 | 145 |
primitive gut | 1.40e-09 | 145 |
adult organism | 7.63e-09 | 114 |
respiratory system | 3.07e-08 | 74 |
compound organ | 5.11e-08 | 68 |
thoracic segment organ | 1.19e-07 | 35 |
transitional epithelium | 3.93e-07 | 6 |
thoracic segment of trunk | 5.01e-07 | 52 |
foregut | 5.12e-07 | 87 |
thoracic cavity element | 7.38e-07 | 34 |
thoracic cavity | 7.38e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.95e-09 | 14 |
cell type cancer | 5.73e-08 | 143 |
carcinoma | 9.75e-08 | 106 |