FFCP PHASE1:Hg19::chr5:143584814..143584834,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57528 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29244 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-5bp_to_ENST00000507359,uc003lnn.1_5end | |||
|cluster_id=chr5:143584814..143584834,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_KCTD16_5end | |||
|id=chr5:143584814..143584834,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002579;6.68e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,9.11e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.05e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!2.10e-38!41;UBERON:0001890!2.10e-38!41;UBERON:0006240!2.10e-38!41;UBERON:0001049!1.32e-37!57;UBERON:0005068!1.32e-37!57;UBERON:0006241!1.32e-37!57;UBERON:0007135!1.32e-37!57;UBERON:0003080!4.14e-37!42;UBERON:0005743!1.43e-34!86;UBERON:0001017!2.66e-33!82;UBERON:0000073!5.69e-33!94;UBERON:0001016!5.69e-33!94;UBERON:0003075!6.66e-33!86;UBERON:0007284!6.66e-33!86;UBERON:0001893!1.56e-32!34;UBERON:0002020!3.25e-32!34;UBERON:0003528!3.25e-32!34;UBERON:0002791!2.04e-31!33;UBERON:0001869!2.48e-31!32;UBERON:0003056!4.01e-31!61;UBERON:0002616!1.84e-30!59;UBERON:0002346!1.98e-30!90;UBERON:0000955!1.11e-29!69;UBERON:0006238!1.11e-29!69;UBERON:0002619!1.86e-26!22;UBERON:0001950!2.47e-24!20;UBERON:0000956!5.74e-24!25;UBERON:0000203!5.74e-24!25;UBERON:0007023!7.50e-24!115;UBERON:0000025!3.97e-21!194;UBERON:0000033!8.12e-18!123;UBERON:0000153!1.01e-17!129;UBERON:0007811!1.01e-17!129;UBERON:0004121!3.39e-15!169;UBERON:0004111!1.82e-14!241;UBERON:0000924!2.52e-14!173;UBERON:0006601!2.52e-14!173;UBERON:0000483!1.00e-13!309;UBERON:0000119!2.73e-13!312;UBERON:0000475!6.17e-12!365;UBERON:0000477!7.78e-12!286;UBERON:0002420!2.29e-10!9;UBERON:0007245!2.29e-10!9;UBERON:0010009!2.29e-10!9;UBERON:0010011!2.29e-10!9;UBERON:0000454!2.29e-10!9;UBERON:0000064!5.38e-10!219;UBERON:0001871!8.30e-10!7;UBERON:0002308!1.26e-09!9;UBERON:0000125!1.26e-09!9;UBERON:0000481!3.44e-09!347;UBERON:0009663!3.86e-08!7;UBERON:0000200!5.74e-08!6;UBERON:0001872!2.77e-07!5;UBERON:0001894!3.32e-07!7;UBERON:0006222!3.32e-07!7;UBERON:0000349!4.95e-07!5;UBERON:0002021!5.50e-07!5;UBERON:0000468!5.92e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.07e-53;32!UBERON:0002619;9.01e-52;22!UBERON:0002791;2.71e-50;32!UBERON:0003528;4.53e-48;34!UBERON:0002020;4.53e-48;34!UBERON:0001893;6.24e-48;34!UBERON:0001950;1.82e-47;20!UBERON:0000956;6.17e-45;25!UBERON:0000203;6.17e-45;25!UBERON:0002780;3.83e-42;41!UBERON:0001890;3.83e-42;41!UBERON:0000073;2.49e-27;53!UBERON:0002616;2.49e-27;53!UBERON:0000955;3.49e-22;68!UBERON:0001017;8.12e-21;75!UBERON:0001016;1.85e-17;83!UBERON:0002420;2.68e-16;9!UBERON:0007245;2.68e-16;9!UBERON:0010009;2.68e-16;9!UBERON:0010011;2.68e-16;9!UBERON:0000454;2.68e-16;9!UBERON:0001871;3.67e-16;6!UBERON:0000200;1.60e-14;6!UBERON:0001872;4.75e-13;5!UBERON:0000349;1.43e-12;5!UBERON:0002021;2.20e-12;5!UBERON:0009663;6.27e-12;7!UBERON:0000125;6.36e-12;9!UBERON:0002308;6.36e-12;9!UBERON:0000369;2.25e-10;4!UBERON:0002435;2.25e-10;4!UBERON:0000204;2.25e-10;4!UBERON:0003688;8.68e-09;6!UBERON:0002358;8.68e-09;6!UBERON:0003684;8.68e-09;6!UBERON:0001178;8.68e-09;6!UBERON:0001870;2.25e-08;3!UBERON:0005383;3.44e-08;3!UBERON:0005382;3.44e-08;3!UBERON:0007023;9.22e-08;114!UBERON:0011216;3.89e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,9.17e-60,32;UBERON:0002780,3.67e-58,41;UBERON:0001890,3.67e-58,41;UBERON:0003080,3.67e-58,41;UBERON:0006240,3.67e-58,41;UBERON:0001893,8.65e-56,34;UBERON:0002791,1.76e-55,32;UBERON:0003528,3.40e-55,34;UBERON:0002020,3.40e-55,34;UBERON:0001049,4.21e-53,56;UBERON:0005068,4.21e-53,56;UBERON:0006241,4.21e-53,56;UBERON:0007135,4.21e-53,56;UBERON:0002619,9.80e-52,22;UBERON:0000073,1.18e-50,53;UBERON:0002616,1.18e-50,53;UBERON:0001950,1.96e-47,20;UBERON:0000956,6.64e-45,25;UBERON:0000203,6.64e-45,25;UBERON:0000955,1.30e-43,68;UBERON:0006238,1.30e-43,68;UBERON:0001017,3.32e-43,81;UBERON:0001016,8.72e-42,89;UBERON:0003056,4.12e-38,61;UBERON:0003075,1.53e-34,82;UBERON:0007284,1.53e-34,82;UBERON:0002346,2.12e-32,86;UBERON:0010371,8.11e-25,104;UBERON:0007023,6.52e-22,114;UBERON:0010314,1.34e-20,132;UBERON:0004121,8.02e-19,171;UBERON:0000924,8.02e-19,171;UBERON:0006601,8.02e-19,171;UBERON:0002420,3.07e-16,9;UBERON:0007245,3.07e-16,9;UBERON:0010009,3.07e-16,9;UBERON:0010011,3.07e-16,9;UBERON:0000454,3.07e-16,9;UBERON:0001871,4.43e-16,6;UBERON:0000200,2.00e-14,6;UBERON:0011216,3.78e-13,223;UBERON:0001872,4.66e-13,5;UBERON:0000025,5.00e-13,192;UBERON:0000349,1.49e-12,5;UBERON:0002021,1.83e-12,5;UBERON:0009663,7.15e-12,7;UBERON:0000125,8.53e-12,9;UBERON:0002308,8.53e-12,9;UBERON:0000369,2.34e-10,4;UBERON:0002435,2.34e-10,4;UBERON:0000204,2.34e-10,4;UBERON:0010082,2.34e-10,4;UBERON:0004111,9.92e-09,240;UBERON:0003688,1.20e-08,6;UBERON:0002358,1.20e-08,6;UBERON:0003684,1.20e-08,6;UBERON:0001178,1.20e-08,6;UBERON:0001870,2.39e-08,3;UBERON:0005383,3.50e-08,3;UBERON:0005382,3.50e-08,3 | |||
|phase1_expression=1.63510541343501,0.642301571672949,2.53717927372748,2.00146596706261,0.893922188854576,1.74467704820074,0,0,0,0.982935746006035,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0.221729397462564,0,1.70272798147026,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,1.19168262731897,0.860509862246441,0.354668382198357,0.560677600142307,2.1349799145941,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0,0,0.300091096084402,0,0.257640540045629,0,0,0,0,0.0920498986422993,0.484938170456436,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.34779121492523,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13669490424889,0,0,1.32969058292435,3.12022310734098,0,0,0,0,0,0,0,0,0,1.80863626235752,0,1.59956785891291,0,0,0,1.4377491329495,0,0,0.289562613335158,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,1.17261385734044,0,0,0,0,0,0,0.271265023699736,0,0,0.315404830067869,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,1.24053903909388,2.60885354589706,0,1.15325234330131,3.58195074346692,1.28683136914886,1.48418066444991,0,0,0,0,0,0,0,0,0.229628896329213,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.984043937099117,0.325378394664303,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25924938732256,0,0,0,0,0.37064843820784,4.29374660225974,0,0,0,0,0,0.318203247925937,0.78494864019923,0.359744915166629,0.274537029736055,0.117812402345686,0.606547444719948,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,2.2054613741845,0.66343897524122,0.876901770507525,0,0,1.01455188481352,0,0.281695602532241,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95903353436409,6.04878490565205,0.667852230137435,0,0,0.19924798825107,0,3.27512572210559,0,0,0,0,0,0,0.0986434056369336,0,0,2.90799823828566,4.54563680993071,3.99227596002388,0,0,0,0,0,0,1.03423011972439,0.291604613383254,0,5.31444831488303,6.15041836989581,0,0.331737779793674,1.18219047581419,3.72955175161753,0,0,0.230850775511391,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0.943615861729479,0,3.74823113160543,0,0,0,0,1.20990716048664,4.89716418608784,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,1.35588444468319,0.137041924646751,0.397429223405979,6.52101198345551,0,0,0,0,0,0,10.4672948695798,0,0,0,0.135904206073614,0.313808538937,0,0,4.20294202096853,1.23214841002794,0,0.859530882839914,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,6.36183751847443,3.67749196501254,0,0.275078873194468,0,0,0,10.3881741885222,0,0.551639951094387,1.31136470337495,0,0.537862017998534,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0,0.681552087141687,0,0,0,1.16354660725395,0.92562821219883,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0.314108192500469,12.4049545195378,4.02686674176478,4.13130071331449,0,0,1.17983165588629,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0.151230923763239,0.466311601748341,0.147855149989634,0,0,0.310525913752519,0.829412415681711,0,0,0,0.380805212168795,0.406870733204662,0,0.214821114084977,0,0.796191777397232,0,0,0.336749488765919,2.52369796457302,0,0,0,1.36023555307363,1.15761237161917,1.71315693154527,0.537266523244462,0,0,0,0,0,0,0,0,3.45646090379327,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,3.83683113910955,0,0.157265941855896,1.85656384926424,0,0,0,0,0,0,13.609702720853,0.352675943690684,3.6749457282384,5.52371335829552,4.25089728976755,3.99084647642878,5.9483745629819,5.5455773168778,7.26151150874288,3.39098855826887,0,0,0,0,0,0,0,0,0.225630985047772,0,4.68908406739856,0,0.49131575253029,0,5.74069469256355,7.02970288752463,7.02735108104026,6.4684126397785,9.29857175330973,0,0,0,0,0.535701835878287,0.672567444437648,0.606965604236632,1.13831095675649,0,0,0.342976018874837,0.543757863814654,5.59068575284217,0,0,0,4.71346769748006,0,0.913158720509496,0.431855182437243,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.1878812211737,0,0,0.11294608203896,0.439762066981716,0.452888530700021,0.0771741581079447,0.437119121007915,1.41095188908457,0,4.94920748913415,0.785233868459781,2.67341760294377,2.5359343655004,0.339854229375634,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0.286679166302903,0,6.4591915681369,5.23620828408453,1.5870805215462,0,0,0,0,0,0,0,0,0,0,1.66713136080127,2.14371304124943,4.1458471972939,2.27552590896169,0.639701945702943,2.85677317756488,0,0,0,0.445530107947154,1.0105859447911,0,0,0,0,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | |||
|short_description=p3@KCTD16 | |||
}} |
Latest revision as of 18:50, 15 September 2015
Short description: | p3@KCTD16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCTD16_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -5bp_to_ENST00000507359, uc003lnn.1_5end |
EntrezGene: | KCTD16 |
HGNC: | 29244 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 9.11e-07 | 3 |