FFCP PHASE1:Hg19::chr7:116312352..116312368,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4233 | |EntrezGene=4233 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7029 | |HGNC=7029 | ||
|TSSclassifier=strong | |||
|UniProt=C9JKM5 | |UniProt=C9JKM5 | ||
|association_with_transcript=-75bp_to_ENST00000456159_5end | |association_with_transcript=-75bp_to_ENST00000456159_5end | ||
|cluster_id=chr7:116312352..116312368,+ | |||
|coexpression_cluster_id=C2876 | |||
|description=CAGE_peak_6_at_MET_5end | |description=CAGE_peak_6_at_MET_5end | ||
|id=chr7:116312352..116312368,+ | |id=chr7:116312352..116312368,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.22e-30!254;CL:0000220!1.13e-11!246;CL:0002321!2.42e-11!248;CL:0002076!5.23e-10!43;CL:0000076!2.07e-09!62;CL:0000223!2.08e-08!59 | |ontology_enrichment_celltype=CL:0000066!3.22e-30!254;CL:0000220!1.13e-11!246;CL:0002321!2.42e-11!248;CL:0002076!5.23e-10!43;CL:0000076!2.07e-09!62;CL:0000223!2.08e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.67e-08;13!CL:0002076;2.97e-08;42!CL:0000150;3.86e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.57e-33,253;CL:0002076,2.59e-11,42;CL:0000223,1.54e-09,58;CL:0002321,3.59e-09,250;CL:0002368,1.92e-08,13;CL:0000076,2.15e-07,63;CL:0002077,2.36e-07,34;CL:0000150,3.30e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.08e-08;29 | |||
|ontology_enrichment_disease=DOID:305!2.70e-13!106;DOID:0050687!7.43e-11!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.31e-18,106;DOID:0050687,1.10e-14,143;DOID:14566,7.78e-08,239;DOID:299,8.50e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0000467!1.64e-10!625;UBERON:0000480!2.56e-10!626;UBERON:0004119!3.09e-08!169;UBERON:0000925!3.09e-08!169;UBERON:0006595!3.09e-08!169;UBERON:0000468!4.77e-08!659;UBERON:0000062!1.85e-07!511;UBERON:0000481!4.94e-07!347;UBERON:0008947!5.10e-07!38;UBERON:0003258!5.10e-07!38;UBERON:0000483!6.20e-07!309 | |ontology_enrichment_uberon=UBERON:0000467!1.64e-10!625;UBERON:0000480!2.56e-10!626;UBERON:0004119!3.09e-08!169;UBERON:0000925!3.09e-08!169;UBERON:0006595!3.09e-08!169;UBERON:0000468!4.77e-08!659;UBERON:0000062!1.85e-07!511;UBERON:0000481!4.94e-07!347;UBERON:0008947!5.10e-07!38;UBERON:0003258!5.10e-07!38;UBERON:0000483!6.20e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0000065;1.87e-08;44!UBERON:0001737;1.43e-07;9!UBERON:0001557;1.43e-07;9!UBERON:0000072;4.82e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,8.37e-10,38;UBERON:0003258,8.37e-10,38;UBERON:0000065,3.32e-09,54;UBERON:0001737,2.99e-08,9;UBERON:0001004,6.69e-08,74;UBERON:0004119,6.12e-07,160;UBERON:0000925,6.12e-07,160;UBERON:0006595,6.12e-07,160;UBERON:0001041,7.74e-07,87 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0,1.39560233594486,1.09220686065086,0.791300934685361,0.123766352960047,0.331397375727916,0.672325146451775,0,1.46062018077475,0.975865597581014,0.123121058076788,0.408001382488506,0,0.572471974262113,1.64249310087461,0.502170558379211,0,0,0,0,0,0,1.83884244895785,2.10844143144775,1.10926203050036,0,0.284338464974843,0,0.553995408531877,0.401088894940283,0,0,0,0,0,0.377875943688809,0,1.16214518452842,0.411167888021826,0.929119112685311,0.28769239232215,0,0,1.03423704220986,0,1.35426486594342,0.376484679085209,0.272906150057846,0,0.918251677112708,0.641858054152187,0,0,0,0,0.870627715885752,0.56738522469114,1.24564449799115,0,0,0,1.81619850790011,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,1.80719576192283,0.50133791063589,0.724232594804119,0.795285947051099,0,0,0,0.175669571386252,0.654895377488563,1.45718115317017,0.370784442784429,0,0,0,0,0,0,0.993812036833525,0.860234595106124,1.04142150482278,0.56530794192401,0.838998872419812,0.275118041940067,0.626984899610432,0,0.35576626268671,0.33472061276467,1.61131726843659,0.760272105718513,0.24406205754817,0.735326160691737,0,0.892997282840798,2.2452937262617,1.91439516821648,0,0.949265659568129,0.183201743930407,0,0,0.436094052142534,0,0.886413581652058,0.397227542439656,1.72101972449288,0,0.560677600142307,2.1349799145941,0.49333509683432,0,0.269421344139376,0.326923806226917,0,0,0,0.312160076830321,0.570471821544449,0.747243402759005,0.469737994575059,0,0,0,0.245668634623536,0,0,0,0.910161361938026,0,0.168336113954066,0.375355559615893,0.554128230968366,0,0.612975591598039,0.150238058906597,0.113432183160021,3.40840307808838,0.640672166455702,0.635795703478686,6.90209520994125,1.33968288009971,1.03056216018252,0.930584281657949,6.24472429292685,1.46155507741798,0.252433774244115,0.276149695926898,0,4.9701342952326,2.92181084860157,1.86516651541536,0.966304265816484,0.818238361772504,2.00763216772303,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0.643240938192885,4.14404764057442,0.464367928031979,0,4.14073800139454,1.68584690078102,4.33819853790268,1.7647035637183,2.83243277320128,2.13543557199987,1.75280700608214,1.96221465125346,1.53898862778556,0,0,0,0,0,0,1.18157981336281,0,0.860919069801795,0.171567810298526,1.31700342490351,0,2.91534019993729,1.48141512253647,0.651616610620649,0,2.88662684050547,0.463721619900307,2.23076519048061,0.144366447761074,0.462985512576611,1.14152491340759,0,0,0,0,0.148631162288728,0,1.6798212819886,1.27597587518148,3.49278238541108,1.45316969256981,0.383382679165211,0,0,0,0,0,10.0961651924549,6.11181480893244,2.34434894420094,1.71072446022705,4.01027221542962,6.60754727256618,8.57479297891735,0,0,0.1466765716419,0,0,0,0.531876233169741,1.04007436911366,0.257207374262142,0,1.3321108950805,0,0,0,0.65147236858747,0,0.791951872933429,0.904318131178758,0,1.29964888536674,0,0,0,0.718874566474748,0,8.5582143024431,2.31650090668127,3.08214483825575,2.14873155887875,0,0,0,0,0,1.30139853857622,0.773288812777695,0.335032530668698,0,0,0,0,0.12269149171914,0,0.271265023699736,0.623912584592421,1.24900292158013,1.89242898040722,3.39710103478868,1.20378439891088,2.27407504055985,0,1.99267679560631,1.65932251687533,0.434418072340414,0,0,0,0,0,0.606255142892519,1.66435439510497,1.5119514666484,0.248107807818777,0.460385919864187,0.561320188866147,0,0.511707249066704,0,0,0,0.355123450626254,1.14978018419333,0,1.39452454151951,0.483437798366489,2.20557117333613,3.03867263488458,0.229628896329213,0.364182336013434,0.393373244878272,0.902399225814824,1.07821471946181,0.784349769176855,1.46139224653261,2.95544560900052,0,0.510281115829547,1.94324324491925,0,0.541892875087706,1.00337954770971,1.01950509218015,0,0.895499018888713,0,0,2.05160100093111,1.64007322849853,0.650756789328606,0.824328093181778,0,0.082509499920588,2.87132768998086,3.25030123018261,0,0.386682873168488,0.462145851343933,0.15350367472613,0.413509717453592,0.322260734604821,0,0.426133137080504,0,1.81813406897076,3.2672311452068,2.67986696238627,1.51736671283325,0.464845549297286,1.5740617341532,0.6970372701606,0,1.06461206063404,0.869932992075073,0.37064843820784,1.14499909393593,0,0.632758849437452,0.190630193923825,0,0.855877976067841,0,0.78494864019923,0,0,0.117812402345686,0,0,0.842516912477962,0,0.487426979262569,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0.66343897524122,0.438450885253763,0,0,0.405820753925408,1.239293992399,1.12678241012897,1.29070216983646,1.57198465620994,1.07001315444375,2.83808851256478,1.47775344708365,0,0,0,2.30933070541229,1.34060455107157,2.17781969722645,0.753150406214233,1.29151611801369,0,1.7737206141467,1.60806380144872,0,0,0,0,0,0,0,0,0,0,3.67560323971548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0.586032717087576,0,0,1.13654458722565,5.25237866422918,4.75143489332222,8.90766036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| ||
|short_description=p6@MET | |short_description=p6@MET | ||
}} | }} |
Latest revision as of 18:07, 15 September 2015
Short description: | p6@MET |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MET_5end |
Coexpression cluster: | C2876_squamous_gastric_pharyngeal_renal_signet_papillotubular_gall |
Association with transcript: | -75bp_to_ENST00000456159_5end |
EntrezGene: | MET |
HGNC: | 7029 |
UniProt: | C9JKM5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.57e-33 | 253 |
endo-epithelial cell | 2.59e-11 | 42 |
endodermal cell | 1.54e-09 | 58 |
embryonic cell | 3.59e-09 | 250 |
respiratory epithelial cell | 1.92e-08 | 13 |
squamous epithelial cell | 2.15e-07 | 63 |
ecto-epithelial cell | 2.36e-07 | 34 |
glandular epithelial cell | 3.30e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
respiratory primordium | 8.37e-10 | 38 |
endoderm of foregut | 8.37e-10 | 38 |
respiratory tract | 3.32e-09 | 54 |
larynx | 2.99e-08 | 9 |
respiratory system | 6.69e-08 | 74 |
endoderm-derived structure | 6.12e-07 | 160 |
endoderm | 6.12e-07 | 160 |
presumptive endoderm | 6.12e-07 | 160 |
foregut | 7.74e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.31e-18 | 106 |
cell type cancer | 1.10e-14 | 143 |
disease of cellular proliferation | 7.78e-08 | 239 |
adenocarcinoma | 8.50e-07 | 25 |