FFCP PHASE1:Mm9::chr3:40753703..40753736,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=351|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:40753703..40753736,+|id=chr3:40753703..40753736,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.38e-09!130;UBERON:0000925!1.38e-09!130;UBERON:0006595!1.38e-09!130;UBERON:0001007!1.48e-09!128;UBERON:0001555!1.48e-09!128;UBERON:0007026!1.48e-09!128;UBERON:0004921!4.77e-09!126;UBERON:0004185!4.77e-09!126;UBERON:0000160!1.07e-07!43;UBERON:0005409!1.40e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.17e-09,118;UBERON:0000925,4.17e-09,118;UBERON:0006595,4.17e-09,118;UBERON:0001007,4.38e-09,116;UBERON:0001555,4.38e-09,116;UBERON:0007026,4.38e-09,116;UBERON:0004921,1.37e-08,114;UBERON:0000160,3.88e-08,31;UBERON:0005409,1.47e-07,47|phase1_expression=0.480446541314382,17.0997949743287,15.9249733786338,19.3577095236371,30.0537437967808,9.73699777088961,9.34450562382103,6.45616617207881,11.5446752164367,12.1713553687437,5.65019295144166,8.53562101250099,4.28001824828014,4.10875891369288,4.99664642723494,5.26435695213547,14.6907994406911,3.15462165358238,3.83920414096069,5.51706547337439,6.12311689087702,1.88652807281682,1.56719873483361,7.67963629408352,5.73523202667925,10.3361753540704,13.3536218809313,13.574687659211,7.03086651988583,7.30887376303799,5.98672378769323,4.44521471421742,1.84519436275371,0,4.91047753577167,4.65457007003779,4.08338712524738,9.62622750694888,10.9386948233332,9.42342739152837,10.5881667845583,7.5135003345429,7.2826552954673,1.51076181570693,1.21652317463417,1.28482726513177,0.782391344348039,2.18025156380447,1.97717564461025,4.08302788055995,1.39986421625363,1.43752564364972,5.70460860596304,9.42970784614748,5.04140698713696,2.57259436035947,3.15186783932632,2.06268836910977,1.41621522601718,2.64495489636016,2.53532561402472,0.677689064138264,0,0.449949858640699,0.988866362566974,0,1.49800055259202,1.15265491596466,1.55534418462716,0.675029691658453,0.420649922702764,2.28520787523043,2.42955395046775,0.857435594504678,1.34183659425531,0.919218786610021,2.20231761998777,5.2351808614927,4.30098293117482,0.791317726381163,1.82975287204819,1.04182674111352,5.02529398202486,3.37657566019008,3.0559649555362,3.83017161115768,2.70506193518296,2.42319279572891,3.86203585999239,1.73814588245607,3.76823835312181,7.74381489283248,5.439770669662,19.9690180905992,9.74664626171504,6.2723764193627,6.46044332606059,1.53387290320252,1.29893002301434,1.06001872353102,3.66192891419369,0,0,0,2.59789249213457,2.53359865475099,3.0331466700887,10.7332846935916,2.33044095282455,2.67195850316685,1.56136794089522,3.34912026143355,2.53677046981664,1.3565037649736,3.76283862834255,4.27266410520897,5.93267922562497,9.39895819979426,12.3845477272982,6.30890714794896,7.50861162765338,6.30337829075789,9.31958806090611,8.78342391034641,4.60782754989601,8.68553987709211,1.43778149407104,0.599902730993408,2.79554499560742,5.09288173976397,4.57500602818627,2.01046963380583,5.73620256634512,6.13717097592793,4.1557608911912,4.54275536589721,2.74966282395854,7.0911973247753,5.05445516867349,3.15662783829711,1.43132487258974,1.37941262660084,1.0803727788321,2.56198190320716,3.46986145671772,4.22775276940004,3.18585863503078,4.13925393182425,0.215567992932842,0.945530400839096,0.527853372491847,0.657587197282725,1.66828349535359,1.0447564995665,2.88094990971121,1.19420560091096,0.702213187313235,0.772043721344145,3.6941254921427,2.27838349789052,2.11073453982987,2.88099298337624,4.26140524053378,3.54175617145327,3.70241070929708,4.18561100550734,6.43856163359086,5.13767506415546,7.07607354627966,6.23836363500562,9.07970666913584,8.91819923294527,9.00155472693308,8.45500438190342,5.04695876553905,2.77842453424068,10.5734010554815,14.0158800331678,1.49301775374664,2.09013004674395,2.70621668776396,3.83198696784351,8.00560957841533,6.46767128782701,5.69434873853414,6.75265714368445,5.27803938480566,5.76973768919337,6.04388670069272,7.19055526923377,11.0230405436094,8.96135729644652,1.32767530667157,1.5994791765362,1.1270773567308,3.25842124552503,4.46090720485539,3.92760591385784,4.86921335856781,5.60918562322488,6.59394656933774,5.67626954040282,10.0793893209631,3.00321190288969,3.53806191203765,4.27238013531222,5.88294352026658,3.61765739628625,4.07401362850272,5.17853047411459,9.07957269940198,4.3929826110093,7.18841032636773,9.30352369171258,9.36113019343682,12.3763650194085,13.6342034276653,15.9206362049911,3.8798169934987,0.947457058852424,1.14075483509418,1.69745085775188,0.469380496577004,3.01511263395268,3.57065461329021,4.48807390072937,3.31033802623001,3.5434350343804,4.78364305972461,6.39066927391378,6.38934432903814,6.219909519005,1.50791283939272,0,6.88469982226651,8.00216564283724,5.29816946959713,6.79827782234778,1.63934945376675,11.1087207969924,1.57754109708128,0.390438744296638,1.93881057959519,1.91175038362042,0.668396022247182,1.69845918473299,2.02405350837447,1.46127928955656,0.790575555893047,2.24924921495265,2.41298144854057,1.78065603667255,2.93196526836437,2.96946221350564,6.63725691699814,0.971122544619926,3.32555912661226,2.45186603682668,2.36241514304618,4.30409207121498,5.68542244970086,5.45300594216258,3.56497378384721,8.84902922220285,8.4334886859999,15.470331487228,4.42571487479924,1.44048875225048,0.646793418913773,0.428674070063185,2.83744373827638,3.38900753443934,3.78462747384878,2.43571959291679,5.63212099352905,3.1774810629573,11.2469483008031,7.25499512942512,4.68246837418126,5.00597276903694,3.58117032009409,6.40149509005739,9.03590593552537,5.19190845629427,5.98048082792484,2.88941615148511,3.88908507476395,6.40452753815949,8.74843057414561,8.92234875505438,1.86976272993241,1.81936888020755,3.17859939750175,3.81868247206045,1.10717597753397,2.64315307264903,2.16010681643603,3.13632444021703,5.24070152990826,5.39457385539283,6.19900917940019,5.23511883968059,6.99920855775682,7.45607175704311,9.01908701894705,1.19613236835183,0.992750942742586,5.05573089694524,3.22899558694328,3.8859908862879,3.0512882047896,3.3853140059427,8.91304427618542,14.0118790079084,10.3690802252832,4.4241556887945,1.01362607645082,1.95150818613172,3.50786222040047,2.8644271306797,3.17890167650024,4.32703618271888,4.43068581523732,4.03865799792591,3.81034033274999,3.7305688500631,4.58052039476836,3.55983814069219,5.2594605981706,8.84248496099324,3.32978930061097,1.97370484540847,1.84673078000486,5.40930863290133,5.44279178808428,5.49454872801795,5.14484109789758,11.5361583928134,6.21227026878773,5.9842280745933,4.01026859407578,3.09335728218638,4.7955776383945,2.2661816921691,6.75022500231806,4.95353323546643,0.906284817968409,2.5888015587591,1.3492355185943,2.39414924040619,0.682934423016537,2.67417388775123,2.09613162627982,4.22840069435032,4.4449345560323,4.12070114477788,3.53011130550997,4.80124702351215,4.05566879824384,3.9611531691076,4.40115085108447,4.1616349063165,4.70970845436029,6.66811167796303,5.44656331940821,4.82273051159263,3.29668720642645,3.38557516309114,5.48590803816665,3.54951612318675,4.5302876089991,3.63366041580821,3.95259397744389,4.48457421825885,3.65855945745545,2.89376682581627,4.48153575691344,2.24456908663095,4.1522256343461,4.23569274214923,3.6830793885272,3.09873682371932,3.2794123866794,2.49810577937946,4.44470056046276,5.58664740525576,5.54736162999646,5.07360263974886,4.40548887678801|short_description=p@chr3:40753703..40753736,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=351 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:40753703..40753736,+ | |||
|description=CAGE_peak_at_chr3:40753703..40753736,+ | |||
|id=chr3:40753703..40753736,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.38e-09!130;UBERON:0000925!1.38e-09!130;UBERON:0006595!1.38e-09!130;UBERON:0001007!1.48e-09!128;UBERON:0001555!1.48e-09!128;UBERON:0007026!1.48e-09!128;UBERON:0004921!4.77e-09!126;UBERON:0004185!4.77e-09!126;UBERON:0000160!1.07e-07!43;UBERON:0005409!1.40e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.17e-09,118;UBERON:0000925,4.17e-09,118;UBERON:0006595,4.17e-09,118;UBERON:0001007,4.38e-09,116;UBERON:0001555,4.38e-09,116;UBERON:0007026,4.38e-09,116;UBERON:0004921,1.37e-08,114;UBERON:0000160,3.88e-08,31;UBERON:0005409,1.47e-07,47 | |||
|phase1_expression=0.480446541314382,17.0997949743287,15.9249733786338,19.3577095236371,30.0537437967808,9.73699777088961,9.34450562382103,6.45616617207881,11.5446752164367,12.1713553687437,5.65019295144166,8.53562101250099,4.28001824828014,4.10875891369288,4.99664642723494,5.26435695213547,14.6907994406911,3.15462165358238,3.83920414096069,5.51706547337439,6.12311689087702,1.88652807281682,1.56719873483361,7.67963629408352,5.73523202667925,10.3361753540704,13.3536218809313,13.574687659211,7.03086651988583,7.30887376303799,5.98672378769323,4.44521471421742,1.84519436275371,0,4.91047753577167,4.65457007003779,4.08338712524738,9.62622750694888,10.9386948233332,9.42342739152837,10.5881667845583,7.5135003345429,7.2826552954673,1.51076181570693,1.21652317463417,1.28482726513177,0.782391344348039,2.18025156380447,1.97717564461025,4.08302788055995,1.39986421625363,1.43752564364972,5.70460860596304,9.42970784614748,5.04140698713696,2.57259436035947,3.15186783932632,2.06268836910977,1.41621522601718,2.64495489636016,2.53532561402472,0.677689064138264,0,0.449949858640699,0.988866362566974,0,1.49800055259202,1.15265491596466,1.55534418462716,0.675029691658453,0.420649922702764,2.28520787523043,2.42955395046775,0.857435594504678,1.34183659425531,0.919218786610021,2.20231761998777,5.2351808614927,4.30098293117482,0.791317726381163,1.82975287204819,1.04182674111352,5.02529398202486,3.37657566019008,3.0559649555362,3.83017161115768,2.70506193518296,2.42319279572891,3.86203585999239,1.73814588245607,3.76823835312181,7.74381489283248,5.439770669662,19.9690180905992,9.74664626171504,6.2723764193627,6.46044332606059,1.53387290320252,1.29893002301434,1.06001872353102,3.66192891419369,0,0,0,2.59789249213457,2.53359865475099,3.0331466700887,10.7332846935916,2.33044095282455,2.67195850316685,1.56136794089522,3.34912026143355,2.53677046981664,1.3565037649736,3.76283862834255,4.27266410520897,5.93267922562497,9.39895819979426,12.3845477272982,6.30890714794896,7.50861162765338,6.30337829075789,9.31958806090611,8.78342391034641,4.60782754989601,8.68553987709211,1.43778149407104,0.599902730993408,2.79554499560742,5.09288173976397,4.57500602818627,2.01046963380583,5.73620256634512,6.13717097592793,4.1557608911912,4.54275536589721,2.74966282395854,7.0911973247753,5.05445516867349,3.15662783829711,1.43132487258974,1.37941262660084,1.0803727788321,2.56198190320716,3.46986145671772,4.22775276940004,3.18585863503078,4.13925393182425,0.215567992932842,0.945530400839096,0.527853372491847,0.657587197282725,1.66828349535359,1.0447564995665,2.88094990971121,1.19420560091096,0.702213187313235,0.772043721344145,3.6941254921427,2.27838349789052,2.11073453982987,2.88099298337624,4.26140524053378,3.54175617145327,3.70241070929708,4.18561100550734,6.43856163359086,5.13767506415546,7.07607354627966,6.23836363500562,9.07970666913584,8.91819923294527,9.00155472693308,8.45500438190342,5.04695876553905,2.77842453424068,10.5734010554815,14.0158800331678,1.49301775374664,2.09013004674395,2.70621668776396,3.83198696784351,8.00560957841533,6.46767128782701,5.69434873853414,6.75265714368445,5.27803938480566,5.76973768919337,6.04388670069272,7.19055526923377,11.0230405436094,8.96135729644652,1.32767530667157,1.5994791765362,1.1270773567308,3.25842124552503,4.46090720485539,3.92760591385784,4.86921335856781,5.60918562322488,6.59394656933774,5.67626954040282,10.0793893209631,3.00321190288969,3.53806191203765,4.27238013531222,5.88294352026658,3.61765739628625,4.07401362850272,5.17853047411459,9.07957269940198,4.3929826110093,7.18841032636773,9.30352369171258,9.36113019343682,12.3763650194085,13.6342034276653,15.9206362049911,3.8798169934987,0.947457058852424,1.14075483509418,1.69745085775188,0.469380496577004,3.01511263395268,3.57065461329021,4.48807390072937,3.31033802623001,3.5434350343804,4.78364305972461,6.39066927391378,6.38934432903814,6.219909519005,1.50791283939272,0,6.88469982226651,8.00216564283724,5.29816946959713,6.79827782234778,1.63934945376675,11.1087207969924,1.57754109708128,0.390438744296638,1.93881057959519,1.91175038362042,0.668396022247182,1.69845918473299,2.02405350837447,1.46127928955656,0.790575555893047,2.24924921495265,2.41298144854057,1.78065603667255,2.93196526836437,2.96946221350564,6.63725691699814,0.971122544619926,3.32555912661226,2.45186603682668,2.36241514304618,4.30409207121498,5.68542244970086,5.45300594216258,3.56497378384721,8.84902922220285,8.4334886859999,15.470331487228,4.42571487479924,1.44048875225048,0.646793418913773,0.428674070063185,2.83744373827638,3.38900753443934,3.78462747384878,2.43571959291679,5.63212099352905,3.1774810629573,11.2469483008031,7.25499512942512,4.68246837418126,5.00597276903694,3.58117032009409,6.40149509005739,9.03590593552537,5.19190845629427,5.98048082792484,2.88941615148511,3.88908507476395,6.40452753815949,8.74843057414561,8.92234875505438,1.86976272993241,1.81936888020755,3.17859939750175,3.81868247206045,1.10717597753397,2.64315307264903,2.16010681643603,3.13632444021703,5.24070152990826,5.39457385539283,6.19900917940019,5.23511883968059,6.99920855775682,7.45607175704311,9.01908701894705,1.19613236835183,0.992750942742586,5.05573089694524,3.22899558694328,3.8859908862879,3.0512882047896,3.3853140059427,8.91304427618542,14.0118790079084,10.3690802252832,4.4241556887945,1.01362607645082,1.95150818613172,3.50786222040047,2.8644271306797,3.17890167650024,4.32703618271888,4.43068581523732,4.03865799792591,3.81034033274999,3.7305688500631,4.58052039476836,3.55983814069219,5.2594605981706,8.84248496099324,3.32978930061097,1.97370484540847,1.84673078000486,5.40930863290133,5.44279178808428,5.49454872801795,5.14484109789758,11.5361583928134,6.21227026878773,5.9842280745933,4.01026859407578,3.09335728218638,4.7955776383945,2.2661816921691,6.75022500231806,4.95353323546643,0.906284817968409,2.5888015587591,1.3492355185943,2.39414924040619,0.682934423016537,2.67417388775123,2.09613162627982,4.22840069435032,4.4449345560323,4.12070114477788,3.53011130550997,4.80124702351215,4.05566879824384,3.9611531691076,4.40115085108447,4.1616349063165,4.70970845436029,6.66811167796303,5.44656331940821,4.82273051159263,3.29668720642645,3.38557516309114,5.48590803816665,3.54951612318675,4.5302876089991,3.63366041580821,3.95259397744389,4.48457421825885,3.65855945745545,2.89376682581627,4.48153575691344,2.24456908663095,4.1522256343461,4.23569274214923,3.6830793885272,3.09873682371932,3.2794123866794,2.49810577937946,4.44470056046276,5.58664740525576,5.54736162999646,5.07360263974886,4.40548887678801 | |||
|short_description=p@chr3:40753703..40753736,+ | |||
}} |
Latest revision as of 10:33, 6 August 2015
Short description: | p@chr3:40753703..40753736, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:40753703..40753736, + |
Coexpression cluster: | MCL_coexpression_mm9:351 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.17e-09 | 118 |
endoderm | 4.17e-09 | 118 |
presumptive endoderm | 4.17e-09 | 118 |
digestive system | 4.38e-09 | 116 |
digestive tract | 4.38e-09 | 116 |
primitive gut | 4.38e-09 | 116 |
subdivision of digestive tract | 1.37e-08 | 114 |
intestine | 3.88e-08 | 31 |
gastrointestinal system | 1.47e-07 | 47 |