FFCP PHASE1:Mm9::chr11:69497898..69497913,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=67bp_to_ENSMUST00000140371_5end | |association_with_transcript=67bp_to_ENSMUST00000140371_5end | ||
|cluster_id=chr11:69497898..69497913,+ | |||
|description=CAGE_peak_3_at_ENSMUST00000140371_5end | |description=CAGE_peak_3_at_ENSMUST00000140371_5end | ||
|id=chr11:69497898..69497913,+ | |id=chr11:69497898..69497913,+ | ||
|ontology_enrichment_celltype=CL:0000239!6.20e-08!6;CL:0000677!6.20e-08!6;CL:0000212!6.20e-08!6;CL:0000584!6.20e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,8.39e-11,3;CL:0000239,6.61e-10,6;CL:0000677,6.61e-10,6;CL:0000584,6.61e-10,6;CL:0000075,1.69e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.43e-15!43;UBERON:0000344!7.23e-12!15;UBERON:0005409!1.08e-10!59;UBERON:0001242!5.49e-10!13;UBERON:0000060!5.49e-10!13;UBERON:0001262!5.49e-10!13;UBERON:0004786!5.49e-10!13;UBERON:0004923!4.60e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.54e-42,31;UBERON:0005409,1.97e-26,47;UBERON:0000344,9.79e-11,15;UBERON:0001242,1.67e-09,13;UBERON:0001262,1.67e-09,13;UBERON:0004786,1.67e-09,13;UBERON:0001007,1.76e-09,116;UBERON:0001555,1.76e-09,116;UBERON:0007026,1.76e-09,116;UBERON:0004119,2.98e-09,118;UBERON:0000925,2.98e-09,118;UBERON:0006595,2.98e-09,118;UBERON:0004921,1.22e-08,114 | |||
|phase1_expression=0,8.37540978334467,9.55498402718026,3.62957053568196,4.50806156951712,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.27993938234725,0.45881856213434,7.46501553349526,1.7230479846363,2.80112602491656,0.380046838912748,0.252030129759931,2.66076612786366,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841767423545896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,12.5559137533843,7.40461586657924,0,0,0,1.4117846723634,2.66853652613844,3.99473814836374,4.74529061544512,10.0466362381647,7.54005626400809,5.57078121715222,3.70431765526328,7.19055526923377,3.24207074812041,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39328098385976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.180938774784468,0.238744688006273,0,5.53813589596716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.618105171716683,0,0.252697211763798,0.50695859978048,0.188626341386076,0.37456602987953,0.384150914429216,0.229741875822453,0,0.115884325944855,0.578727661391115,0.412085900803307,0,0,0.532427418478012,0.715308569841963,0.145346416632329,0.0941093804153306,0.169229215783353,0.548783918618318,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0,0.701794825336225,0.644613162144895,0,0.220591419119515,0 | |phase1_expression=0,8.37540978334467,9.55498402718026,3.62957053568196,4.50806156951712,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.27993938234725,0.45881856213434,7.46501553349526,1.7230479846363,2.80112602491656,0.380046838912748,0.252030129759931,2.66076612786366,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841767423545896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,12.5559137533843,7.40461586657924,0,0,0,1.4117846723634,2.66853652613844,3.99473814836374,4.74529061544512,10.0466362381647,7.54005626400809,5.57078121715222,3.70431765526328,7.19055526923377,3.24207074812041,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39328098385976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.180938774784468,0.238744688006273,0,5.53813589596716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.618105171716683,0,0.252697211763798,0.50695859978048,0.188626341386076,0.37456602987953,0.384150914429216,0.229741875822453,0,0.115884325944855,0.578727661391115,0.412085900803307,0,0,0.532427418478012,0.715308569841963,0.145346416632329,0.0941093804153306,0.169229215783353,0.548783918618318,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0,0.701794825336225,0.644613162144895,0,0.220591419119515,0 | ||
|short_description=p3@ENSMUST00000140371 | |short_description=p3@ENSMUST00000140371 | ||
}} | }} |
Latest revision as of 10:28, 6 August 2015
Short description: | p3@ENSMUST00000140371 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ENSMUST00000140371_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 67bp_to_ENSMUST00000140371_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 8.39e-11 | 3 |
brush border epithelial cell | 6.61e-10 | 6 |
gut absorptive cell | 6.61e-10 | 6 |
enterocyte | 6.61e-10 | 6 |
columnar/cuboidal epithelial cell | 1.69e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.54e-42 | 31 |
gastrointestinal system | 1.97e-26 | 47 |
mucosa | 9.79e-11 | 15 |
intestinal mucosa | 1.67e-09 | 13 |
wall of intestine | 1.67e-09 | 13 |
gastrointestinal system mucosa | 1.67e-09 | 13 |
digestive system | 1.76e-09 | 116 |
digestive tract | 1.76e-09 | 116 |
primitive gut | 1.76e-09 | 116 |
endoderm-derived structure | 2.98e-09 | 118 |
endoderm | 2.98e-09 | 118 |
presumptive endoderm | 2.98e-09 | 118 |
subdivision of digestive tract | 1.22e-08 | 114 |