FFCP PHASE1:Mm9::chr8:33760116..33760119,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=287 | |MCL_coexpression_id=287 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:33760116..33760119,- | |||
|description=CAGE_peak_at_chr8:33760116..33760119,- | |description=CAGE_peak_at_chr8:33760116..33760119,- | ||
|id=chr8:33760116..33760119,- | |id=chr8:33760116..33760119,- | ||
|ontology_enrichment_celltype=CL:0000117!1.66e-43!23;CL:0000337!1.66e-43!23;CL:0000540!1.62e-29!33;CL:0000047!1.62e-29!33;CL:0000031!1.62e-29!33;CL:0000404!1.62e-29!33;CL:0002319!6.80e-25!43;CL:0000393!1.46e-24!39;CL:0000211!1.46e-24!39;CL:0000221!2.90e-24!44;CL:0000133!2.90e-24!44;CL:0000055!5.23e-21!50;CL:0002321!4.98e-16!70;CL:0000220!4.98e-16!70;CL:0002612!5.71e-14!3;CL:0002610!1.99e-13!3;CL:0002614!1.08e-12!3;CL:0000723!1.13e-11!91;CL:0000048!1.13e-11!91;CL:0002609!3.92e-11!6;CL:0000548!5.11e-11!115;CL:0000004!5.11e-11!115;CL:0000255!5.11e-11!115;CL:0000034!9.31e-11!97;CL:0002371!1.18e-10!118;CL:0000144!2.63e-10!121;CL:0000012!2.63e-10!121;CL:0002611!6.22e-09!2 | |ontology_enrichment_celltype=CL:0000117!1.66e-43!23;CL:0000337!1.66e-43!23;CL:0000540!1.62e-29!33;CL:0000047!1.62e-29!33;CL:0000031!1.62e-29!33;CL:0000404!1.62e-29!33;CL:0002319!6.80e-25!43;CL:0000393!1.46e-24!39;CL:0000211!1.46e-24!39;CL:0000221!2.90e-24!44;CL:0000133!2.90e-24!44;CL:0000055!5.23e-21!50;CL:0002321!4.98e-16!70;CL:0000220!4.98e-16!70;CL:0002612!5.71e-14!3;CL:0002610!1.99e-13!3;CL:0002614!1.08e-12!3;CL:0000723!1.13e-11!91;CL:0000048!1.13e-11!91;CL:0002609!3.92e-11!6;CL:0000548!5.11e-11!115;CL:0000004!5.11e-11!115;CL:0000255!5.11e-11!115;CL:0000034!9.31e-11!97;CL:0002371!1.18e-10!118;CL:0000144!2.63e-10!121;CL:0000012!2.63e-10!121;CL:0002611!6.22e-09!2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002612,4.03e-30,3;CL:0000117,6.04e-16,23;CL:0000337,6.04e-16,23;CL:0000540,2.20e-11,33;CL:0000047,2.20e-11,33;CL:0000031,2.20e-11,33;CL:0000404,2.20e-11,33;CL:0000393,9.26e-10,39;CL:0000211,9.26e-10,39;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0002610,1.88e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.04e-21!34;UBERON:0001948!3.14e-21!5;UBERON:0002315!3.14e-21!5;UBERON:0002240!1.15e-17!6;UBERON:0005174!1.15e-17!6;UBERON:0001137!1.15e-17!6;UBERON:0000073!7.14e-15!75;UBERON:0001016!7.14e-15!75;UBERON:0002257!5.71e-14!3;UBERON:0001017!1.37e-13!73;UBERON:0005743!1.37e-13!73;UBERON:0004684!1.99e-13!3;UBERON:0002275!1.99e-13!3;UBERON:0001049!3.71e-13!52;UBERON:0005068!3.71e-13!52;UBERON:0006241!3.71e-13!52;UBERON:0007135!3.71e-13!52;UBERON:0002038!1.08e-12!3;UBERON:0002308!1.08e-12!3;UBERON:0009663!1.08e-12!3;UBERON:0009661!1.08e-12!3;UBERON:0006331!1.08e-12!3;UBERON:0000125!1.08e-12!3;UBERON:0004121!4.12e-10!102;UBERON:0000924!4.12e-10!102;UBERON:0006601!4.12e-10!102;UBERON:0002616!4.70e-10!49;UBERON:0002791!4.88e-10!29;UBERON:0003528!4.88e-10!29;UBERON:0001893!4.88e-10!29;UBERON:0000955!8.22e-10!50;UBERON:0006238!8.22e-10!50;UBERON:0002950!1.20e-09!4;UBERON:0001891!1.20e-09!4;UBERON:0009616!1.20e-09!4;UBERON:0002346!5.70e-09!71;UBERON:0003075!5.70e-09!71;UBERON:0007284!5.70e-09!71;UBERON:0002256!6.22e-09!2;UBERON:0003076!9.98e-09!12;UBERON:0003057!9.98e-09!12;UBERON:0002420!3.17e-08!8;UBERON:0007245!3.17e-08!8;UBERON:0010009!3.17e-08!8;UBERON:0010011!3.17e-08!8;UBERON:0000454!3.17e-08!8;UBERON:0000033!2.32e-07!63;UBERON:0002780!4.03e-07!39;UBERON:0001890!4.03e-07!39;UBERON:0006240!4.03e-07!39;UBERON:0003080!6.56e-07!40 | |ontology_enrichment_uberon=UBERON:0002020!2.04e-21!34;UBERON:0001948!3.14e-21!5;UBERON:0002315!3.14e-21!5;UBERON:0002240!1.15e-17!6;UBERON:0005174!1.15e-17!6;UBERON:0001137!1.15e-17!6;UBERON:0000073!7.14e-15!75;UBERON:0001016!7.14e-15!75;UBERON:0002257!5.71e-14!3;UBERON:0001017!1.37e-13!73;UBERON:0005743!1.37e-13!73;UBERON:0004684!1.99e-13!3;UBERON:0002275!1.99e-13!3;UBERON:0001049!3.71e-13!52;UBERON:0005068!3.71e-13!52;UBERON:0006241!3.71e-13!52;UBERON:0007135!3.71e-13!52;UBERON:0002038!1.08e-12!3;UBERON:0002308!1.08e-12!3;UBERON:0009663!1.08e-12!3;UBERON:0009661!1.08e-12!3;UBERON:0006331!1.08e-12!3;UBERON:0000125!1.08e-12!3;UBERON:0004121!4.12e-10!102;UBERON:0000924!4.12e-10!102;UBERON:0006601!4.12e-10!102;UBERON:0002616!4.70e-10!49;UBERON:0002791!4.88e-10!29;UBERON:0003528!4.88e-10!29;UBERON:0001893!4.88e-10!29;UBERON:0000955!8.22e-10!50;UBERON:0006238!8.22e-10!50;UBERON:0002950!1.20e-09!4;UBERON:0001891!1.20e-09!4;UBERON:0009616!1.20e-09!4;UBERON:0002346!5.70e-09!71;UBERON:0003075!5.70e-09!71;UBERON:0007284!5.70e-09!71;UBERON:0002256!6.22e-09!2;UBERON:0003076!9.98e-09!12;UBERON:0003057!9.98e-09!12;UBERON:0002420!3.17e-08!8;UBERON:0007245!3.17e-08!8;UBERON:0010009!3.17e-08!8;UBERON:0010011!3.17e-08!8;UBERON:0000454!3.17e-08!8;UBERON:0000033!2.32e-07!63;UBERON:0002780!4.03e-07!39;UBERON:0001890!4.03e-07!39;UBERON:0006240!4.03e-07!39;UBERON:0003080!6.56e-07!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002257,4.03e-30,3;UBERON:0001948,1.42e-18,5;UBERON:0002315,1.42e-18,5;UBERON:0002240,1.13e-15,6;UBERON:0005174,1.13e-15,6;UBERON:0001137,1.13e-15,6;UBERON:0004684,1.88e-08,3;UBERON:0002275,1.88e-08,3;UBERON:0003076,2.25e-08,12;UBERON:0003057,2.25e-08,12;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34796496001021,0,0.630974884054146,0.285650984403804,0.662605622854841,0.489963196859816,0.287536413054709,0,1.10115880999389,0.638436690425939,0.921639199537461,0,0.457438218012048,0,0.279182999001381,0.56276261003168,0.916789486660861,2.35702868378934,1.42371680799103,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34796496001021,0,0.630974884054146,0.285650984403804,0.662605622854841,0.489963196859816,0.287536413054709,0,1.10115880999389,0.638436690425939,0.921639199537461,0,0.457438218012048,0,0.279182999001381,0.56276261003168,0.916789486660861,2.35702868378934,1.42371680799103,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:33760116..33760119,- | |short_description=p@chr8:33760116..33760119,- | ||
}} | }} |
Latest revision as of 08:16, 6 August 2015
Short description: | p@chr8:33760116..33760119, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:33760116..33760119, - |
Coexpression cluster: | MCL_coexpression_mm9:287 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 4.03e-30 | 3 |
CNS neuron (sensu Vertebrata) | 6.04e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.04e-16 | 23 |
neuron | 2.20e-11 | 33 |
neuronal stem cell | 2.20e-11 | 33 |
neuroblast | 2.20e-11 | 33 |
electrically signaling cell | 2.20e-11 | 33 |
electrically responsive cell | 9.26e-10 | 39 |
electrically active cell | 9.26e-10 | 39 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
raphe nuclei neuron | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
ventral horn of spinal cord | 4.03e-30 | 3 |
regional part of spinal cord | 1.42e-18 | 5 |
gray matter of spinal cord | 1.42e-18 | 5 |
spinal cord | 1.13e-15 | 6 |
dorsal region element | 1.13e-15 | 6 |
dorsum | 1.13e-15 | 6 |
raphe nuclei | 1.88e-08 | 3 |
reticular formation | 1.88e-08 | 3 |
posterior neural tube | 2.25e-08 | 12 |
chordal neural plate | 2.25e-08 | 12 |
regional part of nervous system | 2.91e-07 | 54 |