FFCP PHASE1:Mm9::chr11:65981508..65981524,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=530|UniProt=|association_with_transcript=0bp_to_uc007jlk.1,uc007jll.1_5end|description=CAGE_peak_1_at_uc007jlk.1_5end,CAGE_peak_1_at_uc007jll.1_5end|id=chr11:65981508..65981524,+|ontology_enrichment_celltype=CL:0000221!2.34e-12!44;CL:0000133!2.34e-12!44;CL:0000117!3.65e-12!23;CL:0000337!3.65e-12!23;CL:0002319!6.47e-12!43;CL:0000055!8.26e-09!50;CL:0000540!2.87e-08!33;CL:0000047!2.87e-08!33;CL:0000031!2.87e-08!33;CL:0000404!2.87e-08!33|ontology_enrichment_celltype_v019_2=CL:0002319,1.57e-21,43;CL:0000221,6.49e-21,44;CL:0000133,6.49e-21,44;CL:0000117,1.64e-19,23;CL:0000337,1.64e-19,23;CL:0002453,4.01e-14,8;CL:0000540,1.68e-12,33;CL:0000047,1.68e-12,33;CL:0000031,1.68e-12,33;CL:0000404,1.68e-12,33;CL:0002321,3.99e-11,70;CL:0000333,4.60e-11,10;CL:0000095,4.60e-11,10;CL:0000243,4.60e-11,10;CL:0000123,4.60e-11,10;CL:0000125,4.60e-11,10;CL:0000030,4.60e-11,10;CL:0000339,4.60e-11,10;CL:0000393,4.93e-10,39;CL:0000211,4.93e-10,39;CL:0000128,1.16e-09,6;CL:0000126,1.16e-09,6;CL:0000127,1.16e-09,6;CL:0002612,6.96e-08,3;CL:0000120,1.96e-07,3;CL:0002613,5.58e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.43e-19!73;UBERON:0005743!4.43e-19!73;UBERON:0000073!5.60e-19!75;UBERON:0001016!5.60e-19!75;UBERON:0004121!3.70e-17!102;UBERON:0000924!3.70e-17!102;UBERON:0006601!3.70e-17!102;UBERON:0001049!1.76e-15!52;UBERON:0005068!1.76e-15!52;UBERON:0006241!1.76e-15!52;UBERON:0007135!1.76e-15!52;UBERON:0002346!3.00e-15!71;UBERON:0003075!3.00e-15!71;UBERON:0007284!3.00e-15!71;UBERON:0000033!5.34e-15!63;UBERON:0000955!3.22e-13!50;UBERON:0006238!3.22e-13!50;UBERON:0002616!4.13e-13!49;UBERON:0003056!7.01e-13!49;UBERON:0007811!4.00e-12!86;UBERON:0002020!5.92e-12!34;UBERON:0003080!8.43e-11!40;UBERON:0000153!9.25e-11!94;UBERON:0002780!3.23e-10!39;UBERON:0001890!3.23e-10!39;UBERON:0006240!3.23e-10!39;UBERON:0002791!1.37e-08!29;UBERON:0003528!1.37e-08!29;UBERON:0001893!1.37e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.30e-25,73;UBERON:0001016,9.88e-25,75;UBERON:0004121,1.19e-22,95;UBERON:0000924,1.19e-22,95;UBERON:0006601,1.19e-22,95;UBERON:0000073,5.00e-19,54;UBERON:0002346,2.28e-18,64;UBERON:0003075,2.28e-18,64;UBERON:0007284,2.28e-18,64;UBERON:0001049,4.74e-18,52;UBERON:0005068,4.74e-18,52;UBERON:0006241,4.74e-18,52;UBERON:0007135,4.74e-18,52;UBERON:0002020,3.67e-16,34;UBERON:0010371,2.49e-15,73;UBERON:0002240,4.57e-14,6;UBERON:0005174,4.57e-14,6;UBERON:0001137,4.57e-14,6;UBERON:0001948,2.01e-12,5;UBERON:0002315,2.01e-12,5;UBERON:0003076,1.82e-11,12;UBERON:0003057,1.82e-11,12;UBERON:0010314,6.98e-11,92;UBERON:0003056,8.43e-11,49;UBERON:0002616,2.88e-10,46;UBERON:0000955,5.78e-10,47;UBERON:0006238,5.78e-10,47;UBERON:0003080,2.54e-09,40;UBERON:0003528,6.17e-09,29;UBERON:0002791,6.17e-09,29;UBERON:0001893,6.17e-09,29;UBERON:0002780,2.84e-08,39;UBERON:0001890,2.84e-08,39;UBERON:0006240,2.84e-08,39;UBERON:0002257,6.96e-08,3;UBERON:0002420,7.07e-07,8;UBERON:0007245,7.07e-07,8;UBERON:0010009,7.07e-07,8;UBERON:0010011,7.07e-07,8;UBERON:0000454,7.07e-07,8|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,3.07560655828261,3.30530828426282,1.53985063787899,1.43752564364972,0,0,0,0,0.286533439938757,0,2.02316460859598,2.11596391708813,1.26766280701236,0,0,0,0,0,3.59520132622086,4.99483796918021,0.829516898467821,0.405017814995072,0.420649922702764,4.57041575046086,2.65042249141936,0.367472397644862,0.287536413054709,0,2.20231761998777,0.638436690425939,1.0752457327937,1.18697658957174,1.09785172322892,2.08365348222704,0.558365998002762,2.25105044012672,2.44477196442896,3.83017161115768,1.99320353118744,2.05039390407831,0.151452386666368,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0.258937883647172,0,0,0.304465478312141,0.230615497256059,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.49790639404823,0.457500602818626,0.376963056338593,0.521472960576829,0,1.0389402227978,0.648965052271031,0.305518091550949,0.124406970610093,0,0.631325567659422,0,0.459804208866946,0,1.05493372485001,2.17716797284249,0.512454881139399,0.749613796477831,3.62184719034622,0,0.567318240503458,0,0,0,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.233530684734339,0,0.164167464079095,0,0.146199987425332,0,0,2.52347938276953,3.91037527041281,0,0,0,0.464473343720877,0.128867461322093,0.403367049246685,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0.189491411770485,0,0,0,1.00503754465089,0.714130922658041,0.390267295715598,0.788175720530955,0.44292937929755,0.478364305972461,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,0.80275294993896,1.87538698547525,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0.395287777946524,0.321321316421807,0.567760340833074,0,0.325773918707152,0.494910368917606,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0,0.709360934569094,0.535106452806212,0.658196082408484,1.2178597964584,0,0,0.220528398054962,0.49465875882444,0.161464426695906,0,0,0,0,1.11255181206306,0,0.206386867963223,0.555583582109135,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0,0,0.0826534557253359,0,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0,0.129159823477731,0.506868376472335,0.352071715937262,1.0416350787516,0.314578033277133,0,0,0,0.608175645870493,0.718976700153791,1.42912905275575,0.358053391334963,0.198681354781265,0.360586348559907,0.443068581523732,0.403865799792591,0.0762068066549998,0,0.194915761479505,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0,0.501572104035363,1.6942555278512,0.920650473014354,0.572895513439397,1.20297227640581,0,0,0,0.900642406448441,0,1.03552062350364,0.103787347584177,0,0.512200817262403,0.486213434136588,0.628839487883947,0.551530525350042,0.666740183404846,0.412070114477788,0.64183841918363,0.505394423527595,0.760437899670719,0.377252682772152,0.655490552289177,0.704276676453562,0.287177344778066,0.476293691283074,0.463537303779422,1.15745532278223,0,0.588795680537589,0.685738504770831,0.70990322463735,0.715308569841963,0.726732083161643,0.376437521661322,1.01537529470012,0.73171189149109,0.526139422875686,0.679020569229309,0.561142271657738,0.474540072496697,0.985044823755635,0,0.619747364743864,0,1.24905288968973,0.467863216890817,0.214871054048298,0.382576664137687,0,0|short_description=p1@uc007jlk.1,p1@uc007jll.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=530 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc007jlk.1,uc007jll.1_5end | |||
|cluster_id=chr11:65981508..65981524,+ | |||
|description=CAGE_peak_1_at_uc007jlk.1_5end,CAGE_peak_1_at_uc007jll.1_5end | |||
|id=chr11:65981508..65981524,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.34e-12!44;CL:0000133!2.34e-12!44;CL:0000117!3.65e-12!23;CL:0000337!3.65e-12!23;CL:0002319!6.47e-12!43;CL:0000055!8.26e-09!50;CL:0000540!2.87e-08!33;CL:0000047!2.87e-08!33;CL:0000031!2.87e-08!33;CL:0000404!2.87e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.57e-21,43;CL:0000221,6.49e-21,44;CL:0000133,6.49e-21,44;CL:0000117,1.64e-19,23;CL:0000337,1.64e-19,23;CL:0002453,4.01e-14,8;CL:0000540,1.68e-12,33;CL:0000047,1.68e-12,33;CL:0000031,1.68e-12,33;CL:0000404,1.68e-12,33;CL:0002321,3.99e-11,70;CL:0000333,4.60e-11,10;CL:0000095,4.60e-11,10;CL:0000243,4.60e-11,10;CL:0000123,4.60e-11,10;CL:0000125,4.60e-11,10;CL:0000030,4.60e-11,10;CL:0000339,4.60e-11,10;CL:0000393,4.93e-10,39;CL:0000211,4.93e-10,39;CL:0000128,1.16e-09,6;CL:0000126,1.16e-09,6;CL:0000127,1.16e-09,6;CL:0002612,6.96e-08,3;CL:0000120,1.96e-07,3;CL:0002613,5.58e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.43e-19!73;UBERON:0005743!4.43e-19!73;UBERON:0000073!5.60e-19!75;UBERON:0001016!5.60e-19!75;UBERON:0004121!3.70e-17!102;UBERON:0000924!3.70e-17!102;UBERON:0006601!3.70e-17!102;UBERON:0001049!1.76e-15!52;UBERON:0005068!1.76e-15!52;UBERON:0006241!1.76e-15!52;UBERON:0007135!1.76e-15!52;UBERON:0002346!3.00e-15!71;UBERON:0003075!3.00e-15!71;UBERON:0007284!3.00e-15!71;UBERON:0000033!5.34e-15!63;UBERON:0000955!3.22e-13!50;UBERON:0006238!3.22e-13!50;UBERON:0002616!4.13e-13!49;UBERON:0003056!7.01e-13!49;UBERON:0007811!4.00e-12!86;UBERON:0002020!5.92e-12!34;UBERON:0003080!8.43e-11!40;UBERON:0000153!9.25e-11!94;UBERON:0002780!3.23e-10!39;UBERON:0001890!3.23e-10!39;UBERON:0006240!3.23e-10!39;UBERON:0002791!1.37e-08!29;UBERON:0003528!1.37e-08!29;UBERON:0001893!1.37e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.30e-25,73;UBERON:0001016,9.88e-25,75;UBERON:0004121,1.19e-22,95;UBERON:0000924,1.19e-22,95;UBERON:0006601,1.19e-22,95;UBERON:0000073,5.00e-19,54;UBERON:0002346,2.28e-18,64;UBERON:0003075,2.28e-18,64;UBERON:0007284,2.28e-18,64;UBERON:0001049,4.74e-18,52;UBERON:0005068,4.74e-18,52;UBERON:0006241,4.74e-18,52;UBERON:0007135,4.74e-18,52;UBERON:0002020,3.67e-16,34;UBERON:0010371,2.49e-15,73;UBERON:0002240,4.57e-14,6;UBERON:0005174,4.57e-14,6;UBERON:0001137,4.57e-14,6;UBERON:0001948,2.01e-12,5;UBERON:0002315,2.01e-12,5;UBERON:0003076,1.82e-11,12;UBERON:0003057,1.82e-11,12;UBERON:0010314,6.98e-11,92;UBERON:0003056,8.43e-11,49;UBERON:0002616,2.88e-10,46;UBERON:0000955,5.78e-10,47;UBERON:0006238,5.78e-10,47;UBERON:0003080,2.54e-09,40;UBERON:0003528,6.17e-09,29;UBERON:0002791,6.17e-09,29;UBERON:0001893,6.17e-09,29;UBERON:0002780,2.84e-08,39;UBERON:0001890,2.84e-08,39;UBERON:0006240,2.84e-08,39;UBERON:0002257,6.96e-08,3;UBERON:0002420,7.07e-07,8;UBERON:0007245,7.07e-07,8;UBERON:0010009,7.07e-07,8;UBERON:0010011,7.07e-07,8;UBERON:0000454,7.07e-07,8 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,3.07560655828261,3.30530828426282,1.53985063787899,1.43752564364972,0,0,0,0,0.286533439938757,0,2.02316460859598,2.11596391708813,1.26766280701236,0,0,0,0,0,3.59520132622086,4.99483796918021,0.829516898467821,0.405017814995072,0.420649922702764,4.57041575046086,2.65042249141936,0.367472397644862,0.287536413054709,0,2.20231761998777,0.638436690425939,1.0752457327937,1.18697658957174,1.09785172322892,2.08365348222704,0.558365998002762,2.25105044012672,2.44477196442896,3.83017161115768,1.99320353118744,2.05039390407831,0.151452386666368,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0.258937883647172,0,0,0.304465478312141,0.230615497256059,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.49790639404823,0.457500602818626,0.376963056338593,0.521472960576829,0,1.0389402227978,0.648965052271031,0.305518091550949,0.124406970610093,0,0.631325567659422,0,0.459804208866946,0,1.05493372485001,2.17716797284249,0.512454881139399,0.749613796477831,3.62184719034622,0,0.567318240503458,0,0,0,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.233530684734339,0,0.164167464079095,0,0.146199987425332,0,0,2.52347938276953,3.91037527041281,0,0,0,0.464473343720877,0.128867461322093,0.403367049246685,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0.189491411770485,0,0,0,1.00503754465089,0.714130922658041,0.390267295715598,0.788175720530955,0.44292937929755,0.478364305972461,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,0.80275294993896,1.87538698547525,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0.395287777946524,0.321321316421807,0.567760340833074,0,0.325773918707152,0.494910368917606,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0,0.709360934569094,0.535106452806212,0.658196082408484,1.2178597964584,0,0,0.220528398054962,0.49465875882444,0.161464426695906,0,0,0,0,1.11255181206306,0,0.206386867963223,0.555583582109135,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0,0,0.0826534557253359,0,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0,0.129159823477731,0.506868376472335,0.352071715937262,1.0416350787516,0.314578033277133,0,0,0,0.608175645870493,0.718976700153791,1.42912905275575,0.358053391334963,0.198681354781265,0.360586348559907,0.443068581523732,0.403865799792591,0.0762068066549998,0,0.194915761479505,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0,0.501572104035363,1.6942555278512,0.920650473014354,0.572895513439397,1.20297227640581,0,0,0,0.900642406448441,0,1.03552062350364,0.103787347584177,0,0.512200817262403,0.486213434136588,0.628839487883947,0.551530525350042,0.666740183404846,0.412070114477788,0.64183841918363,0.505394423527595,0.760437899670719,0.377252682772152,0.655490552289177,0.704276676453562,0.287177344778066,0.476293691283074,0.463537303779422,1.15745532278223,0,0.588795680537589,0.685738504770831,0.70990322463735,0.715308569841963,0.726732083161643,0.376437521661322,1.01537529470012,0.73171189149109,0.526139422875686,0.679020569229309,0.561142271657738,0.474540072496697,0.985044823755635,0,0.619747364743864,0,1.24905288968973,0.467863216890817,0.214871054048298,0.382576664137687,0,0 | |||
|short_description=p1@uc007jlk.1,p1@uc007jll.1 | |||
}} |
Latest revision as of 07:48, 6 August 2015
Short description: | p1@uc007jlk.1, p1@uc007jll.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007jlk.1_5end, CAGE_peak_1_at_uc007jll.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:530 |
Association with transcript: | 0bp_to_uc007jlk.1, uc007jll.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.57e-21 | 43 |
ectodermal cell | 6.49e-21 | 44 |
neurectodermal cell | 6.49e-21 | 44 |
CNS neuron (sensu Vertebrata) | 1.64e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.64e-19 | 23 |
oligodendrocyte precursor cell | 4.01e-14 | 8 |
neuron | 1.68e-12 | 33 |
neuronal stem cell | 1.68e-12 | 33 |
neuroblast | 1.68e-12 | 33 |
electrically signaling cell | 1.68e-12 | 33 |
embryonic cell | 3.99e-11 | 70 |
migratory neural crest cell | 4.60e-11 | 10 |
neuron associated cell | 4.60e-11 | 10 |
glial cell (sensu Vertebrata) | 4.60e-11 | 10 |
neuron associated cell (sensu Vertebrata) | 4.60e-11 | 10 |
glial cell | 4.60e-11 | 10 |
glioblast | 4.60e-11 | 10 |
glioblast (sensu Vertebrata) | 4.60e-11 | 10 |
electrically responsive cell | 4.93e-10 | 39 |
electrically active cell | 4.93e-10 | 39 |
oligodendrocyte | 1.16e-09 | 6 |
macroglial cell | 1.16e-09 | 6 |
astrocyte | 1.16e-09 | 6 |
neuron of the ventral spinal cord | 6.96e-08 | 3 |
granule cell | 1.96e-07 | 3 |
striatum neuron | 5.58e-07 | 3 |